RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 MYD88Q99836 296 aa19.39■□□□□ 0.69
RPF1-202ENST00000370656 CHMP4AQ9BY43 222 aa19.39■□□□□ 0.69
RPF1-202ENST00000370656 CWC25Q9NXE8 425 aaPredicted RBP19.39■□□□□ 0.69
RPF1-202ENST00000370656 HDAC9Q9UKV0 1011 aa19.39■□□□□ 0.69
RPF1-202ENST00000370656 MBIPQ9NS73 344 aa19.38■□□□□ 0.69
RPF1-202ENST00000370656 DDX58O95786 925 aaKnown RBP19.37■□□□□ 0.69
RPF1-202ENST00000370656 NF2P35240 595 aa19.37■□□□□ 0.69
RPF1-202ENST00000370656 OGFOD1Q8N543 542 aa19.37■□□□□ 0.69
RPF1-202ENST00000370656 CCDC85AQ96PX6 553 aaPredicted RBP19.37■□□□□ 0.69
RPF1-202ENST00000370656 GMLQ99445 158 aa19.37■□□□□ 0.69
RPF1-202ENST00000370656 CDC5LQ99459 802 aaKnown RBP19.37■□□□□ 0.69
RPF1-202ENST00000370656 PHAXQ9H814 394 aaKnown RBP19.37■□□□□ 0.69
RPF1-202ENST00000370656 MYH3P11055 1940 aa19.37■□□□□ 0.69
RPF1-202ENST00000370656 CALD1Q05682 793 aaKnown RBP19.36■□□□□ 0.69
RPF1-202ENST00000370656 TTLL12Q14166 644 aaPredicted RBP19.36■□□□□ 0.69
RPF1-202ENST00000370656 ZBED9Q6R2W3 1325 aa19.35■□□□□ 0.69
RPF1-202ENST00000370656 POTEHQ6S545 545 aa19.35■□□□□ 0.69
RPF1-202ENST00000370656 ADAMTS8Q9UP79 889 aa19.35■□□□□ 0.69
RPF1-202ENST00000370656 HPS5Q9UPZ3 1129 aa19.35■□□□□ 0.69
RPF1-202ENST00000370656 SPEF2Q9C093 1822 aa19.35■□□□□ 0.69
RPF1-202ENST00000370656 MYO3BQ8WXR4 1341 aa19.34■□□□□ 0.69
RPF1-202ENST00000370656 UBE2Q2LH0YL09 131 aa19.34■□□□□ 0.69
RPF1-202ENST00000370656 MMP14P50281 582 aa19.34■□□□□ 0.69
RPF1-202ENST00000370656 GNAI1P63096 354 aa19.34■□□□□ 0.69
RPF1-202ENST00000370656 HNRNPUQ00839 825 aaKnown RBP eCLIP19.34■□□□□ 0.69
RPF1-202ENST00000370656 METTL22Q9BUU2 404 aaPredicted RBP19.34■□□□□ 0.69
RPF1-202ENST00000370656 IFT57Q9NWB7 429 aa19.34■□□□□ 0.69
RPF1-202ENST00000370656 MED23Q9ULK4 1368 aa19.33■□□□□ 0.69
RPF1-202ENST00000370656 ZNF296Q8WUU4 475 aaPredicted RBP19.33■□□□□ 0.68
RPF1-202ENST00000370656 ELL2O00472 640 aaPredicted RBP19.32■□□□□ 0.68
RPF1-202ENST00000370656 TBC1D8O95759 1140 aa19.32■□□□□ 0.68
RPF1-202ENST00000370656 ZNF853P0CG23 659 aa19.32■□□□□ 0.68
RPF1-202ENST00000370656 TM4SF4P48230 202 aa19.32■□□□□ 0.68
RPF1-202ENST00000370656 CTSWP56202 376 aa19.32■□□□□ 0.68
RPF1-202ENST00000370656 SREBF2Q12772 1141 aa19.32■□□□□ 0.68
RPF1-202ENST00000370656 NBPF9Q3BBW0 867 aa19.32■□□□□ 0.68
RPF1-202ENST00000370656 NOM1Q5C9Z4 860 aaKnown RBP19.32■□□□□ 0.68
RPF1-202ENST00000370656 MOB2Q70IA6 237 aa19.32■□□□□ 0.68
RPF1-202ENST00000370656 JARID2Q92833 1246 aaPredicted RBP19.32■□□□□ 0.68
RPF1-202ENST00000370656 FBXW7Q969H0 707 aa19.32■□□□□ 0.68
RPF1-202ENST00000370656 BSDC1Q9NW68 430 aaPredicted RBP19.32■□□□□ 0.68
RPF1-202ENST00000370656 CCDC30Q5VVM6 783 aa19.31■□□□□ 0.68
RPF1-202ENST00000370656 SCAF8Q9UPN6 1271 aaKnown RBP19.31■□□□□ 0.68
RPF1-202ENST00000370656 WNT10BO00744 389 aa19.3■□□□□ 0.68
RPF1-202ENST00000370656 NEXNQ0ZGT2 675 aa19.3■□□□□ 0.68
RPF1-202ENST00000370656 DACT2Q5SW24 774 aa19.3■□□□□ 0.68
RPF1-202ENST00000370656 STRIP1Q5VSL9 837 aa19.3■□□□□ 0.68
RPF1-202ENST00000370656 PRAMEF18Q5VWM3 479 aa19.3■□□□□ 0.68
RPF1-202ENST00000370656 MINPP1Q9UNW1 487 aa19.3■□□□□ 0.68
RPF1-202ENST00000370656 GPR25O00155 361 aa19.29■□□□□ 0.68
RPF1-202ENST00000370656 CCT4P50991 539 aaKnown RBP19.29■□□□□ 0.68
RPF1-202ENST00000370656 FBXO46Q6PJ61 603 aaPredicted RBP19.29■□□□□ 0.68
RPF1-202ENST00000370656 ARMC9Q7Z3E5 817 aa19.29■□□□□ 0.68
RPF1-202ENST00000370656 COA1Q9GZY4 146 aa19.29■□□□□ 0.68
RPF1-202ENST00000370656 MAP3K2Q9Y2U5 619 aa19.29■□□□□ 0.68
RPF1-202ENST00000370656 ZNF646O15015 1829 aaPredicted RBP19.28■□□□□ 0.68
RPF1-202ENST00000370656 APOBEC3FQ8IUX4 373 aaKnown RBP19.28■□□□□ 0.68
RPF1-202ENST00000370656 TTLL11Q8NHH1 800 aa19.28■□□□□ 0.68
RPF1-202ENST00000370656 FKTNO75072 461 aa19.27■□□□□ 0.68
RPF1-202ENST00000370656 IGHMBP2P38935 993 aaKnown RBP19.27■□□□□ 0.68
RPF1-202ENST00000370656 MKRN3Q13064 507 aaKnown RBP19.27■□□□□ 0.68
RPF1-202ENST00000370656 KSR2Q6VAB6 950 aa19.27■□□□□ 0.68
RPF1-202ENST00000370656 GREM2Q9H772 168 aa19.27■□□□□ 0.68
RPF1-202ENST00000370656 LEMD3Q9Y2U8 911 aa19.27■□□□□ 0.68
RPF1-202ENST00000370656 ALDH1A1P00352 501 aa19.26■□□□□ 0.67
RPF1-202ENST00000370656 TTLL5Q6EMB2 1281 aa19.26■□□□□ 0.67
RPF1-202ENST00000370656 C8orf58Q8NAV2 365 aa19.26■□□□□ 0.67
RPF1-202ENST00000370656 MXD3Q9BW11 206 aa19.26■□□□□ 0.67
RPF1-202ENST00000370656 CFHR5Q9BXR6 569 aa19.26■□□□□ 0.67
RPF1-202ENST00000370656 PI4KAP2A4QPH2 592 aa19.25■□□□□ 0.67
RPF1-202ENST00000370656 APAF1O14727 1248 aa19.25■□□□□ 0.67
RPF1-202ENST00000370656 SASH1O94885 1247 aa19.25■□□□□ 0.67
RPF1-202ENST00000370656 PI4KAP1Q8N8J0 262 aa19.25■□□□□ 0.67
RPF1-202ENST00000370656 STK31Q9BXU1 1019 aa19.25■□□□□ 0.67
RPF1-202ENST00000370656 ANKRD2Q9GZV1 360 aa19.25■□□□□ 0.67
RPF1-202ENST00000370656 WTIPA6NIX2 430 aaPredicted RBP19.24■□□□□ 0.67
RPF1-202ENST00000370656 IGKV5-2P06315 115 aa19.24■□□□□ 0.67
RPF1-202ENST00000370656 PTPN12Q05209 780 aaKnown RBP19.24■□□□□ 0.67
RPF1-202ENST00000370656 PRKG1Q13976 671 aa19.24■□□□□ 0.67
RPF1-202ENST00000370656 ZNF804BA4D1E1 1349 aa19.24■□□□□ 0.67
RPF1-202ENST00000370656 COL1A1P02452 1464 aaPredicted RBP19.23■□□□□ 0.67
RPF1-202ENST00000370656 INHBEP58166 350 aa19.23■□□□□ 0.67
RPF1-202ENST00000370656 SPRYD7Q5W111 196 aa19.23■□□□□ 0.67
RPF1-202ENST00000370656 KIAA0825Q8IV33 1275 aa19.23■□□□□ 0.67
RPF1-202ENST00000370656 GCC1Q96CN9 775 aa19.23■□□□□ 0.67
RPF1-202ENST00000370656 MPHOSPH8Q99549 860 aa19.23■□□□□ 0.67
RPF1-202ENST00000370656 ANGEL1Q9UNK9 670 aaKnown RBP19.23■□□□□ 0.67
RPF1-202ENST00000370656 KCNJ4P48050 445 aa19.22■□□□□ 0.67
RPF1-202ENST00000370656 LDLRAD1Q5T700 205 aa19.22■□□□□ 0.67
RPF1-202ENST00000370656 UBE3BQ7Z3V4 1068 aa19.22■□□□□ 0.67
RPF1-202ENST00000370656 ECM29Q5VYK3 1845 aa19.22■□□□□ 0.67
RPF1-202ENST00000370656 MANSC4A6NHS7 340 aaPredicted RBP19.21■□□□□ 0.67
RPF1-202ENST00000370656 NEURL1BA8MQ27 555 aa19.21■□□□□ 0.67
RPF1-202ENST00000370656 GTF2IP78347 998 aa19.21■□□□□ 0.67
RPF1-202ENST00000370656 CWF19L2Q2TBE0 894 aaKnown RBP19.21■□□□□ 0.67
RPF1-202ENST00000370656 TXNRD3Q86VQ6 643 aa19.21■□□□□ 0.67
RPF1-202ENST00000370656 SLC10A4Q96EP9 437 aa19.21■□□□□ 0.67
RPF1-202ENST00000370656 PPP1R12BO60237 982 aaPredicted RBP19.2■□□□□ 0.66
RPF1-202ENST00000370656 DLGAP5Q15398 846 aa19.2■□□□□ 0.66
RPF1-202ENST00000370656 H7C1W4 665 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms