RNA–Protein interactions for RNA: ENST00000357798.9

NPAS3-203, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-203ENST00000357798 PDIA6Q15084 440 aa27.65■■■□□ 2.02
NPAS3-203ENST00000357798 CHMP4CQ96CF2 233 aa27.65■■■□□ 2.02
NPAS3-203ENST00000357798 BCL11BQ9C0K0 894 aaPredicted RBP27.65■■■□□ 2.02
NPAS3-203ENST00000357798 LMTK3Q96Q04 1460 aa27.64■■■□□ 2.02
NPAS3-203ENST00000357798 FOSBP53539 338 aa27.64■■■□□ 2.02
NPAS3-203ENST00000357798 GCKRQ14397 625 aa27.64■■■□□ 2.02
NPAS3-203ENST00000357798 PPP1R13BQ96KQ4 1090 aa27.64■■■□□ 2.02
NPAS3-203ENST00000357798 SEC62Q99442 399 aaKnown RBP27.64■■■□□ 2.02
NPAS3-203ENST00000357798 EXOSC10Q01780 885 aaKnown RBP27.64■■■□□ 2.01
NPAS3-203ENST00000357798 EPHA10Q5JZY3 1008 aa27.64■■■□□ 2.01
NPAS3-203ENST00000357798 ADAMTS7Q9UKP4 1686 aa27.63■■■□□ 2.01
NPAS3-203ENST00000357798 ILDR1Q86SU0 546 aaPredicted RBP27.63■■■□□ 2.01
NPAS3-203ENST00000357798 RTEL1Q9NZ71 1219 aa27.63■■■□□ 2.01
NPAS3-203ENST00000357798 APOBRQ0VD83 1088 aa27.63■■■□□ 2.01
NPAS3-203ENST00000357798 BMS1Q14692 1282 aaKnown RBP27.63■■■□□ 2.01
NPAS3-203ENST00000357798 CCDC93Q567U6 631 aa27.63■■■□□ 2.01
NPAS3-203ENST00000357798 ADALQ6DHV7 355 aa27.63■■■□□ 2.01
NPAS3-203ENST00000357798 ZNF446Q9NWS9 450 aa27.63■■■□□ 2.01
NPAS3-203ENST00000357798 RFX5P48382 616 aaPredicted RBP27.62■■■□□ 2.01
NPAS3-203ENST00000357798 LRRC59Q96AG4 307 aaKnown RBP27.62■■■□□ 2.01
NPAS3-203ENST00000357798 PCDHA7Q9UN72 937 aa27.62■■■□□ 2.01
NPAS3-203ENST00000357798 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.62■■■□□ 2.01
NPAS3-203ENST00000357798 NRDCO43847 1150 aa27.61■■■□□ 2.01
NPAS3-203ENST00000357798 TFCP2Q12800 502 aa27.61■■■□□ 2.01
NPAS3-203ENST00000357798 KCNH5Q8NCM2 988 aa27.61■■■□□ 2.01
NPAS3-203ENST00000357798 DNAJC2Q99543 621 aaKnown RBP27.61■■■□□ 2.01
NPAS3-203ENST00000357798 SDF4Q9BRK5 362 aa27.61■■■□□ 2.01
NPAS3-203ENST00000357798 KIAA1468Q9P260 1216 aa27.61■■■□□ 2.01
NPAS3-203ENST00000357798 ARMCX5Q6P1M9 558 aa27.6■■■□□ 2.01
NPAS3-203ENST00000357798 DSCC1Q9BVC3 393 aa27.6■■■□□ 2.01
NPAS3-203ENST00000357798 SFPQP23246 707 aaKnown RBP eCLIP27.6■■■□□ 2.01
NPAS3-203ENST00000357798 KBTBD3Q8NAB2 608 aa27.6■■■□□ 2.01
NPAS3-203ENST00000357798 ZNF274Q96GC6 653 aaPredicted RBP27.6■■■□□ 2.01
NPAS3-203ENST00000357798 XPO4Q9C0E2 1151 aaKnown RBP27.6■■■□□ 2.01
NPAS3-203ENST00000357798 PHF8Q9UPP1 1060 aa27.6■■■□□ 2.01
NPAS3-203ENST00000357798 PALLDQ8WX93 1383 aa27.6■■■□□ 2.01
NPAS3-203ENST00000357798 PTPN12Q05209 780 aaKnown RBP27.6■■■□□ 2.01
NPAS3-203ENST00000357798 TMC6Q7Z403 805 aa27.6■■■□□ 2.01
NPAS3-203ENST00000357798 CARMIL3Q8ND23 1372 aa27.59■■■□□ 2.01
NPAS3-203ENST00000357798 TPM4P67936 248 aa27.59■■■□□ 2.01
NPAS3-203ENST00000357798 ZRSR1Q15695 479 aaKnown RBP27.59■■■□□ 2.01
NPAS3-203ENST00000357798 METTL22Q9BUU2 404 aaPredicted RBP27.59■■■□□ 2.01
NPAS3-203ENST00000357798 C5P01031 1676 aa27.59■■■□□ 2.01
NPAS3-203ENST00000357798 TICAM2Q86XR7 235 aa27.59■■■□□ 2.01
NPAS3-203ENST00000357798 HELLSQ9NRZ9 838 aa27.59■■■□□ 2.01
NPAS3-203ENST00000357798 IFNKQ9P0W0 207 aa27.59■■■□□ 2.01
NPAS3-203ENST00000357798 NDUFB9Q9Y6M9 179 aa27.59■■■□□ 2.01
NPAS3-203ENST00000357798 SMC2O95347 1197 aa27.58■■■□□ 2.01
NPAS3-203ENST00000357798 CHGBP05060 677 aa27.58■■■□□ 2.01
NPAS3-203ENST00000357798 CCT2P78371 535 aaKnown RBP27.58■■■□□ 2.01
NPAS3-203ENST00000357798 ERCC4Q92889 916 aaPredicted RBP27.58■■■□□ 2.01
NPAS3-203ENST00000357798 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP27.58■■■□□ 2.01
NPAS3-203ENST00000357798 CAMTA1Q9Y6Y1 1673 aa27.58■■■□□ 2.01
NPAS3-203ENST00000357798 ERCC6LQ2NKX8 1250 aa27.58■■■□□ 2.01
NPAS3-203ENST00000357798 DPCR1Q3MIW9 517 aa27.58■■■□□ 2.01
NPAS3-203ENST00000357798 SYT10Q6XYQ8 523 aa27.58■■■□□ 2.01
NPAS3-203ENST00000357798 DBNDD2Q9BQY9 259 aa27.58■■■□□ 2.01
NPAS3-203ENST00000357798 CCP110O43303 1012 aa27.57■■■□□ 2
NPAS3-203ENST00000357798 PDIA3P30101 505 aaKnown RBP27.56■■■□□ 2
NPAS3-203ENST00000357798 NDUFA8P51970 172 aa27.56■■■□□ 2
NPAS3-203ENST00000357798 DDX46Q7L014 1031 aaKnown RBP27.56■■■□□ 2
NPAS3-203ENST00000357798 LINC00301Q8NCQ3 95 aa27.56■■■□□ 2
NPAS3-203ENST00000357798 MYD88Q99836 296 aa27.56■■■□□ 2
NPAS3-203ENST00000357798 NCOA5Q9HCD5 579 aaKnown RBP27.56■■■□□ 2
NPAS3-203ENST00000357798 A0A1B0GVL5 298 aa27.56■■■□□ 2
NPAS3-203ENST00000357798 KCNA6P17658 529 aa27.56■■■□□ 2
NPAS3-203ENST00000357798 RABL6Q3YEC7 729 aaPredicted RBP27.56■■■□□ 2
NPAS3-203ENST00000357798 KCNG4Q8TDN1 519 aa27.56■■■□□ 2
NPAS3-203ENST00000357798 FBXW7Q969H0 707 aa27.56■■■□□ 2
NPAS3-203ENST00000357798 NEDD4P46934 1319 aa27.56■■■□□ 2
NPAS3-203ENST00000357798 AFDNP55196 1824 aaKnown RBP27.55■■■□□ 2
NPAS3-203ENST00000357798 A0A0U1RQG5 324 aaPredicted RBP27.55■■■□□ 2
NPAS3-203ENST00000357798 YEATS4O95619 227 aa27.55■■■□□ 2
NPAS3-203ENST00000357798 NLRP12P59046 1061 aa27.55■■■□□ 2
NPAS3-203ENST00000357798 GUCY1B3Q02153 619 aa27.55■■■□□ 2
NPAS3-203ENST00000357798 FHOD1Q9Y613 1164 aa27.54■■■□□ 2
NPAS3-203ENST00000357798 PHLPP2Q6ZVD8 1323 aa27.54■■■□□ 2
NPAS3-203ENST00000357798 E7EWF7 191 aa27.54■■■□□ 2
NPAS3-203ENST00000357798 CLCN6P51797 869 aa27.54■■■□□ 2
NPAS3-203ENST00000357798 XAGE3Q8WTP9 111 aa27.54■■■□□ 2
NPAS3-203ENST00000357798 STK38Q15208 465 aa27.54■■■□□ 2
NPAS3-203ENST00000357798 FBXL16Q8N461 479 aa27.53■■■□□ 2
NPAS3-203ENST00000357798 NOL10Q9BSC4 688 aaKnown RBP27.53■■■□□ 2
NPAS3-203ENST00000357798 POLR3EQ9NVU0 708 aa27.53■■■□□ 2
NPAS3-203ENST00000357798 CALCOCO1Q9P1Z2 691 aa27.53■■■□□ 2
NPAS3-203ENST00000357798 NPHP1O15259 732 aa27.52■■■□□ 2
NPAS3-203ENST00000357798 ETF1P62495 437 aaKnown RBP27.52■■■□□ 2
NPAS3-203ENST00000357798 NCAPHQ15003 741 aa27.52■■■□□ 2
NPAS3-203ENST00000357798 SF3A1Q15459 793 aaKnown RBP27.52■■■□□ 2
NPAS3-203ENST00000357798 ST7Q9NRC1 585 aa27.52■■■□□ 2
NPAS3-203ENST00000357798 SLC3A2P08195 630 aaKnown RBP27.52■■■□□ 2
NPAS3-203ENST00000357798 FDPSP14324 419 aaKnown RBP27.52■■■□□ 2
NPAS3-203ENST00000357798 LRRN4CLQ8ND94 238 aa27.52■■■□□ 2
NPAS3-203ENST00000357798 IKBKBO14920 756 aa27.51■■□□□ 1.99
NPAS3-203ENST00000357798 EVCP57679 992 aa27.51■■□□□ 1.99
NPAS3-203ENST00000357798 ZMYM1Q5SVZ6 1142 aa27.51■■□□□ 1.99
NPAS3-203ENST00000357798 TIGD1Q96MW7 591 aa27.51■■□□□ 1.99
NPAS3-203ENST00000357798 COPS6Q7L5N1 327 aa27.51■■□□□ 1.99
NPAS3-203ENST00000357798 NAP1L2Q9ULW6 460 aaPredicted RBP27.51■■□□□ 1.99
NPAS3-203ENST00000357798 SLIT3O75094 1523 aa27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms