RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 USP17L8P0C7I0 530 aa11.1□□□□□ -0.63
COL4A3BP-202ENST00000357457 ATP2B4P23634 1241 aa11.1□□□□□ -0.63
COL4A3BP-202ENST00000357457 DCAF8Q5TAQ9 597 aa11.1□□□□□ -0.63
COL4A3BP-202ENST00000357457 MYD88Q99836 296 aa11.1□□□□□ -0.63
COL4A3BP-202ENST00000357457 MYOZ2Q9NPC6 264 aa11.1□□□□□ -0.63
COL4A3BP-202ENST00000357457 CWC25Q9NXE8 425 aaPredicted RBP11.1□□□□□ -0.63
COL4A3BP-202ENST00000357457 PCDH10Q9P2E7 1040 aa11.1□□□□□ -0.63
COL4A3BP-202ENST00000357457 MKI67P46013 3256 aaKnown RBP11.09□□□□□ -0.63
COL4A3BP-202ENST00000357457 USP17L3A6NCW0 530 aa11.09□□□□□ -0.63
COL4A3BP-202ENST00000357457 USP17L4A6NCW7 530 aa11.09□□□□□ -0.63
COL4A3BP-202ENST00000357457 GNAI1P63096 354 aa11.09□□□□□ -0.63
COL4A3BP-202ENST00000357457 DDX10Q13206 875 aaKnown RBP11.09□□□□□ -0.63
COL4A3BP-202ENST00000357457 USP17L1Q7RTZ2 530 aa11.09□□□□□ -0.63
COL4A3BP-202ENST00000357457 CTU1Q7Z7A3 348 aaKnown RBP11.09□□□□□ -0.63
COL4A3BP-202ENST00000357457 ANKRD18AQ8IVF6 992 aa11.09□□□□□ -0.63
COL4A3BP-202ENST00000357457 JARID2Q92833 1246 aaPredicted RBP11.09□□□□□ -0.63
COL4A3BP-202ENST00000357457 CHMP4AQ9BY43 222 aa11.09□□□□□ -0.63
COL4A3BP-202ENST00000357457 CENPFP49454 3210 aa11.09□□□□□ -0.63
COL4A3BP-202ENST00000357457 PAPPA2Q9BXP8 1791 aa11.08□□□□□ -0.64
COL4A3BP-202ENST00000357457 MYH3P11055 1940 aa11.08□□□□□ -0.64
COL4A3BP-202ENST00000357457 WTIPA6NIX2 430 aaPredicted RBP11.08□□□□□ -0.64
COL4A3BP-202ENST00000357457 ELL2O00472 640 aaPredicted RBP11.08□□□□□ -0.64
COL4A3BP-202ENST00000357457 TM4SF4P48230 202 aa11.08□□□□□ -0.64
COL4A3BP-202ENST00000357457 MMP14P50281 582 aa11.08□□□□□ -0.64
COL4A3BP-202ENST00000357457 CALD1Q05682 793 aaKnown RBP11.08□□□□□ -0.64
COL4A3BP-202ENST00000357457 NOM1Q5C9Z4 860 aaKnown RBP11.08□□□□□ -0.64
COL4A3BP-202ENST00000357457 C8orf58Q8NAV2 365 aa11.08□□□□□ -0.64
COL4A3BP-202ENST00000357457 TTLL11Q8NHH1 800 aa11.08□□□□□ -0.64
COL4A3BP-202ENST00000357457 BSDC1Q9NW68 430 aaPredicted RBP11.08□□□□□ -0.64
COL4A3BP-202ENST00000357457 MINPP1Q9UNW1 487 aa11.08□□□□□ -0.64
COL4A3BP-202ENST00000357457 APAF1O14727 1248 aa11.07□□□□□ -0.64
COL4A3BP-202ENST00000357457 DDX58O95786 925 aaKnown RBP11.07□□□□□ -0.64
COL4A3BP-202ENST00000357457 IGKV5-2P06315 115 aa11.07□□□□□ -0.64
COL4A3BP-202ENST00000357457 VASPP50552 380 aaPredicted RBP11.07□□□□□ -0.64
COL4A3BP-202ENST00000357457 PKN2Q16513 984 aaKnown RBP11.07□□□□□ -0.64
COL4A3BP-202ENST00000357457 NBPF9Q3BBW0 867 aa11.07□□□□□ -0.64
COL4A3BP-202ENST00000357457 DACT2Q5SW24 774 aa11.07□□□□□ -0.64
COL4A3BP-202ENST00000357457 CCDC30Q5VVM6 783 aa11.07□□□□□ -0.64
COL4A3BP-202ENST00000357457 CCDC85AQ96PX6 553 aaPredicted RBP11.07□□□□□ -0.64
COL4A3BP-202ENST00000357457 CDC5LQ99459 802 aaKnown RBP11.07□□□□□ -0.64
COL4A3BP-202ENST00000357457 ZNF646O15015 1829 aaPredicted RBP11.07□□□□□ -0.64
COL4A3BP-202ENST00000357457 MED23Q9ULK4 1368 aa11.06□□□□□ -0.64
COL4A3BP-202ENST00000357457 UBE2Q2LH0YL09 131 aa11.06□□□□□ -0.64
COL4A3BP-202ENST00000357457 WNT10BO00744 389 aa11.06□□□□□ -0.64
COL4A3BP-202ENST00000357457 CCT4P50991 539 aaKnown RBP11.06□□□□□ -0.64
COL4A3BP-202ENST00000357457 CTSWP56202 376 aa11.06□□□□□ -0.64
COL4A3BP-202ENST00000357457 SOX10P56693 466 aa11.06□□□□□ -0.64
COL4A3BP-202ENST00000357457 STRIP1Q5VSL9 837 aa11.06□□□□□ -0.64
COL4A3BP-202ENST00000357457 KSR2Q6VAB6 950 aa11.06□□□□□ -0.64
COL4A3BP-202ENST00000357457 MOB2Q70IA6 237 aa11.06□□□□□ -0.64
COL4A3BP-202ENST00000357457 PIP4P2Q8N4L2 257 aa11.06□□□□□ -0.64
COL4A3BP-202ENST00000357457 MAP3K2Q9Y2U5 619 aa11.06□□□□□ -0.64
COL4A3BP-202ENST00000357457 BRCA2P51587 3418 aa11.05□□□□□ -0.64
COL4A3BP-202ENST00000357457 PI4KAP2A4QPH2 592 aa11.05□□□□□ -0.64
COL4A3BP-202ENST00000357457 PRAMEF18Q5VWM3 479 aa11.05□□□□□ -0.64
COL4A3BP-202ENST00000357457 OGFOD1Q8N543 542 aa11.05□□□□□ -0.64
COL4A3BP-202ENST00000357457 PI4KAP1Q8N8J0 262 aa11.05□□□□□ -0.64
COL4A3BP-202ENST00000357457 ZNF296Q8WUU4 475 aaPredicted RBP11.05□□□□□ -0.64
COL4A3BP-202ENST00000357457 CFHR5Q9BXR6 569 aa11.05□□□□□ -0.64
COL4A3BP-202ENST00000357457 COA1Q9GZY4 146 aa11.05□□□□□ -0.64
COL4A3BP-202ENST00000357457 GREM2Q9H772 168 aa11.05□□□□□ -0.64
COL4A3BP-202ENST00000357457 PRKRIP1Q9H875 184 aaPredicted RBP11.05□□□□□ -0.64
COL4A3BP-202ENST00000357457 SCAF8Q9UPN6 1271 aaKnown RBP11.05□□□□□ -0.64
COL4A3BP-202ENST00000357457 HPS5Q9UPZ3 1129 aa11.05□□□□□ -0.64
COL4A3BP-202ENST00000357457 LEMD3Q9Y2U8 911 aa11.05□□□□□ -0.64
COL4A3BP-202ENST00000357457 HTTP42858 3142 aa11.05□□□□□ -0.64
COL4A3BP-202ENST00000357457 MYO3BQ8WXR4 1341 aa11.05□□□□□ -0.64
COL4A3BP-202ENST00000357457 H7C1W4 665 aa11.04□□□□□ -0.64
COL4A3BP-202ENST00000357457 TBC1D8O95759 1140 aa11.04□□□□□ -0.64
COL4A3BP-202ENST00000357457 TXNRD3Q86VQ6 643 aa11.04□□□□□ -0.64
COL4A3BP-202ENST00000357457 TSPYL6Q8N831 410 aa11.04□□□□□ -0.64
COL4A3BP-202ENST00000357457 ZBED3Q96IU2 234 aaPredicted RBP11.04□□□□□ -0.64
COL4A3BP-202ENST00000357457 MXD3Q9BW11 206 aa11.04□□□□□ -0.64
COL4A3BP-202ENST00000357457 PLA2G12BQ9BX93 195 aa11.04□□□□□ -0.64
COL4A3BP-202ENST00000357457 CACNA1FO60840 1977 aa11.03□□□□□ -0.64
COL4A3BP-202ENST00000357457 NEURL1BA8MQ27 555 aa11.03□□□□□ -0.64
COL4A3BP-202ENST00000357457 GPR25O00155 361 aa11.03□□□□□ -0.64
COL4A3BP-202ENST00000357457 PITPNM1O00562 1244 aa11.03□□□□□ -0.64
COL4A3BP-202ENST00000357457 LDLRAD1Q5T700 205 aa11.03□□□□□ -0.64
COL4A3BP-202ENST00000357457 TTLL5Q6EMB2 1281 aa11.03□□□□□ -0.64
COL4A3BP-202ENST00000357457 SP7Q8TDD2 431 aaPredicted RBP11.03□□□□□ -0.64
COL4A3BP-202ENST00000357457 SPEF2Q9C093 1822 aa11.02□□□□□ -0.64
COL4A3BP-202ENST00000357457 CSF1RP07333 972 aa11.02□□□□□ -0.65
COL4A3BP-202ENST00000357457 NF2P35240 595 aa11.02□□□□□ -0.65
COL4A3BP-202ENST00000357457 PTPN12Q05209 780 aaKnown RBP11.02□□□□□ -0.65
COL4A3BP-202ENST00000357457 NEXNQ0ZGT2 675 aa11.02□□□□□ -0.65
COL4A3BP-202ENST00000357457 CWF19L2Q2TBE0 894 aaKnown RBP11.02□□□□□ -0.65
COL4A3BP-202ENST00000357457 PRPF38BQ5VTL8 546 aaKnown RBP11.02□□□□□ -0.65
COL4A3BP-202ENST00000357457 HDAC9Q9UKV0 1011 aa11.02□□□□□ -0.65
COL4A3BP-202ENST00000357457 KIAA0100Q14667 2235 aaKnown RBP11.02□□□□□ -0.65
COL4A3BP-202ENST00000357457 ZNF804BA4D1E1 1349 aa11.02□□□□□ -0.65
COL4A3BP-202ENST00000357457 IGHMBP2P38935 993 aaKnown RBP11.01□□□□□ -0.65
COL4A3BP-202ENST00000357457 CASP7P55210 303 aa11.01□□□□□ -0.65
COL4A3BP-202ENST00000357457 SREBF2Q12772 1141 aa11.01□□□□□ -0.65
COL4A3BP-202ENST00000357457 TTLL12Q14166 644 aaPredicted RBP11.01□□□□□ -0.65
COL4A3BP-202ENST00000357457 ARMC9Q7Z3E5 817 aa11.01□□□□□ -0.65
COL4A3BP-202ENST00000357457 APOBEC3FQ8IUX4 373 aaKnown RBP11.01□□□□□ -0.65
COL4A3BP-202ENST00000357457 PLCD3Q8N3E9 789 aa11.01□□□□□ -0.65
COL4A3BP-202ENST00000357457 MTMR14Q8NCE2 650 aa11.01□□□□□ -0.65
COL4A3BP-202ENST00000357457 ANKRD2Q9GZV1 360 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms