RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 GOLGA2Q08379 1002 aa20.41■□□□□ 0.86
COPE-202ENST00000349893 SPRYD7Q5W111 196 aa20.41■□□□□ 0.86
COPE-202ENST00000349893 INTS3Q68E01 1043 aaKnown RBP20.41■□□□□ 0.86
COPE-202ENST00000349893 RIC3Q7Z5B4 369 aa20.41■□□□□ 0.86
COPE-202ENST00000349893 OGFOD1Q8N543 542 aa20.41■□□□□ 0.86
COPE-202ENST00000349893 WTIPA6NIX2 430 aaPredicted RBP20.4■□□□□ 0.86
COPE-202ENST00000349893 COL1A1P02452 1464 aaPredicted RBP20.4■□□□□ 0.86
COPE-202ENST00000349893 STRIP1Q5VSL9 837 aa20.4■□□□□ 0.86
COPE-202ENST00000349893 ARMC9Q7Z3E5 817 aa20.4■□□□□ 0.86
COPE-202ENST00000349893 ZBED3Q96IU2 234 aaPredicted RBP20.4■□□□□ 0.86
COPE-202ENST00000349893 LAS1LQ9Y4W2 734 aaKnown RBP20.4■□□□□ 0.86
COPE-202ENST00000349893 INHBEP58166 350 aa20.39■□□□□ 0.85
COPE-202ENST00000349893 MKRN3Q13064 507 aaKnown RBP20.39■□□□□ 0.85
COPE-202ENST00000349893 NEUROD2Q15784 382 aa20.39■□□□□ 0.85
COPE-202ENST00000349893 MXD3Q9BW11 206 aa20.39■□□□□ 0.85
COPE-202ENST00000349893 APOBEC3FQ8IUX4 373 aaKnown RBP20.38■□□□□ 0.85
COPE-202ENST00000349893 CDC5LQ99459 802 aaKnown RBP20.38■□□□□ 0.85
COPE-202ENST00000349893 MYD88Q99836 296 aa20.38■□□□□ 0.85
COPE-202ENST00000349893 COA1Q9GZY4 146 aa20.38■□□□□ 0.85
COPE-202ENST00000349893 PHAXQ9H814 394 aaKnown RBP20.38■□□□□ 0.85
COPE-202ENST00000349893 BSDC1Q9NW68 430 aaPredicted RBP20.38■□□□□ 0.85
COPE-202ENST00000349893 CWC25Q9NXE8 425 aaPredicted RBP20.38■□□□□ 0.85
COPE-202ENST00000349893 MINPP1Q9UNW1 487 aa20.38■□□□□ 0.85
COPE-202ENST00000349893 KIAA0100Q14667 2235 aaKnown RBP20.37■□□□□ 0.85
COPE-202ENST00000349893 POTEFA5A3E0 1075 aa20.37■□□□□ 0.85
COPE-202ENST00000349893 MANSC4A6NHS7 340 aaPredicted RBP20.37■□□□□ 0.85
COPE-202ENST00000349893 RALBP1Q15311 655 aa20.37■□□□□ 0.85
COPE-202ENST00000349893 MAP3K11Q16584 847 aa20.37■□□□□ 0.85
COPE-202ENST00000349893 OTOP1Q7RTM1 612 aa20.37■□□□□ 0.85
COPE-202ENST00000349893 IFNL1Q8IU54 200 aa20.37■□□□□ 0.85
COPE-202ENST00000349893 MYH3P11055 1940 aa20.37■□□□□ 0.85
COPE-202ENST00000349893 SASH1O94885 1247 aa20.36■□□□□ 0.85
COPE-202ENST00000349893 ZNF853P0CG23 659 aa20.36■□□□□ 0.85
COPE-202ENST00000349893 CTSWP56202 376 aa20.36■□□□□ 0.85
COPE-202ENST00000349893 CCDC146Q8IYE0 955 aa20.36■□□□□ 0.85
COPE-202ENST00000349893 RUNDC1Q96C34 613 aa20.36■□□□□ 0.85
COPE-202ENST00000349893 CCDC85AQ96PX6 553 aaPredicted RBP20.36■□□□□ 0.85
COPE-202ENST00000349893 METTL22Q9BUU2 404 aaPredicted RBP20.36■□□□□ 0.85
COPE-202ENST00000349893 MBIPQ9NS73 344 aa20.36■□□□□ 0.85
COPE-202ENST00000349893 UNCXA6NJT0 531 aa20.35■□□□□ 0.85
COPE-202ENST00000349893 ZBTB48P10074 688 aaPredicted RBP20.35■□□□□ 0.85
COPE-202ENST00000349893 CCT4P50991 539 aaKnown RBP20.35■□□□□ 0.85
COPE-202ENST00000349893 TTLL11Q8NHH1 800 aa20.35■□□□□ 0.85
COPE-202ENST00000349893 TRIM17Q9Y577 477 aa20.35■□□□□ 0.85
COPE-202ENST00000349893 SPEF2Q9C093 1822 aa20.34■□□□□ 0.85
COPE-202ENST00000349893 JARID2Q92833 1246 aaPredicted RBP20.34■□□□□ 0.85
COPE-202ENST00000349893 ARMC5Q96C12 935 aa20.34■□□□□ 0.85
COPE-202ENST00000349893 ANGEL1Q9UNK9 670 aaKnown RBP20.34■□□□□ 0.85
COPE-202ENST00000349893 SSC5DA1L4H1 1573 aa20.34■□□□□ 0.85
COPE-202ENST00000349893 TXNRD3Q86VQ6 643 aa20.33■□□□□ 0.85
COPE-202ENST00000349893 PTPN22Q9Y2R2 807 aa20.33■□□□□ 0.85
COPE-202ENST00000349893 LEMD3Q9Y2U8 911 aa20.33■□□□□ 0.85
COPE-202ENST00000349893 IGF2BP3O00425 579 aaKnown RBP eCLIP20.32■□□□□ 0.84
COPE-202ENST00000349893 FXR1P51114 621 aaKnown RBP eCLIP20.32■□□□□ 0.84
COPE-202ENST00000349893 PRKG1Q13976 671 aa20.32■□□□□ 0.84
COPE-202ENST00000349893 GREM2Q9H772 168 aa20.32■□□□□ 0.84
COPE-202ENST00000349893 ECM29Q5VYK3 1845 aa20.32■□□□□ 0.84
COPE-202ENST00000349893 TTLL5Q6EMB2 1281 aa20.31■□□□□ 0.84
COPE-202ENST00000349893 MTMR14Q8NCE2 650 aa20.31■□□□□ 0.84
COPE-202ENST00000349893 SLC10A4Q96EP9 437 aa20.31■□□□□ 0.84
COPE-202ENST00000349893 ERO1AQ96HE7 468 aa20.31■□□□□ 0.84
COPE-202ENST00000349893 WNK4Q96J92 1243 aa20.31■□□□□ 0.84
COPE-202ENST00000349893 DEFB129Q9H1M3 183 aa20.31■□□□□ 0.84
COPE-202ENST00000349893 PPP2R3BQ9Y5P8 575 aa20.31■□□□□ 0.84
COPE-202ENST00000349893 DDX58O95786 925 aaKnown RBP20.3■□□□□ 0.84
COPE-202ENST00000349893 KIAA0825Q8IV33 1275 aa20.3■□□□□ 0.84
COPE-202ENST00000349893 IGKV5-2P06315 115 aa20.29■□□□□ 0.84
COPE-202ENST00000349893 FBXW7Q969H0 707 aa20.29■□□□□ 0.84
COPE-202ENST00000349893 IFT57Q9NWB7 429 aa20.29■□□□□ 0.84
COPE-202ENST00000349893 FZD1Q9UP38 647 aa20.29■□□□□ 0.84
COPE-202ENST00000349893 SZT2Q5T011 3432 aa20.28■□□□□ 0.84
COPE-202ENST00000349893 TESPA1A2RU30 521 aaPredicted RBP20.28■□□□□ 0.84
COPE-202ENST00000349893 KLRK1P26718 216 aa20.28■□□□□ 0.84
COPE-202ENST00000349893 CLMNQ96JQ2 1002 aa20.28■□□□□ 0.84
COPE-202ENST00000349893 ZNF804BA4D1E1 1349 aa20.27■□□□□ 0.84
COPE-202ENST00000349893 PPP1R12BO60237 982 aaPredicted RBP20.27■□□□□ 0.84
COPE-202ENST00000349893 CRHR2Q13324 411 aa20.27■□□□□ 0.84
COPE-202ENST00000349893 MAP3K2Q9Y2U5 619 aa20.27■□□□□ 0.84
COPE-202ENST00000349893 MYBBP1AQ9BQG0 1328 aaKnown RBP20.27■□□□□ 0.83
COPE-202ENST00000349893 IRS2Q9Y4H2 1338 aa20.27■□□□□ 0.83
COPE-202ENST00000349893 CEP290O15078 2479 aa20.26■□□□□ 0.83
COPE-202ENST00000349893 EN2P19622 333 aaPredicted RBP20.26■□□□□ 0.83
COPE-202ENST00000349893 GTF2IP78347 998 aa20.26■□□□□ 0.83
COPE-202ENST00000349893 CD99L2Q8TCZ2 262 aa20.26■□□□□ 0.83
COPE-202ENST00000349893 CHMP4AQ9BY43 222 aa20.26■□□□□ 0.83
COPE-202ENST00000349893 ANKRD2Q9GZV1 360 aa20.26■□□□□ 0.83
COPE-202ENST00000349893 ADAMTS8Q9UP79 889 aa20.26■□□□□ 0.83
COPE-202ENST00000349893 GJA5P36382 358 aa20.25■□□□□ 0.83
COPE-202ENST00000349893 GNAI1P63096 354 aa20.25■□□□□ 0.83
COPE-202ENST00000349893 CAP1Q01518 475 aa20.25■□□□□ 0.83
COPE-202ENST00000349893 DLGAP5Q15398 846 aa20.25■□□□□ 0.83
COPE-202ENST00000349893 OTUD7BQ6GQQ9 843 aa20.25■□□□□ 0.83
COPE-202ENST00000349893 KSR2Q6VAB6 950 aa20.25■□□□□ 0.83
COPE-202ENST00000349893 C8orf58Q8NAV2 365 aa20.25■□□□□ 0.83
COPE-202ENST00000349893 PTPN18Q99952 460 aa20.25■□□□□ 0.83
COPE-202ENST00000349893 EFCC1Q9HA90 598 aa20.25■□□□□ 0.83
COPE-202ENST00000349893 RANBP2P49792 3224 aaKnown RBP20.25■□□□□ 0.83
COPE-202ENST00000349893 H7C1W4 665 aa20.24■□□□□ 0.83
COPE-202ENST00000349893 ELL2O00472 640 aaPredicted RBP20.24■□□□□ 0.83
COPE-202ENST00000349893 IGHMBP2P38935 993 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms