RNA–Protein interactions for RNA: ENST00000347545.8

ARHGEF1-202, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-202ENST00000347545 H3BQV1 296 aa17.13■□□□□ 0.33
ARHGEF1-202ENST00000347545 PPFIA3O75145 1194 aa17.13■□□□□ 0.33
ARHGEF1-202ENST00000347545 CCT2P78371 535 aaKnown RBP17.13■□□□□ 0.33
ARHGEF1-202ENST00000347545 IFFO2Q5TF58 517 aa17.13■□□□□ 0.33
ARHGEF1-202ENST00000347545 CHST3Q7LGC8 479 aa17.13■□□□□ 0.33
ARHGEF1-202ENST00000347545 ILDR1Q86SU0 546 aaPredicted RBP17.13■□□□□ 0.33
ARHGEF1-202ENST00000347545 CCDC191Q8NCU4 936 aa17.13■□□□□ 0.33
ARHGEF1-202ENST00000347545 ZSCAN16Q9H4T2 348 aaPredicted RBP17.13■□□□□ 0.33
ARHGEF1-202ENST00000347545 GOLGA6L4A6NEF3 574 aa17.13■□□□□ 0.33
ARHGEF1-202ENST00000347545 RNF113AO15541 343 aaKnown RBP17.13■□□□□ 0.33
ARHGEF1-202ENST00000347545 CIAO1O76071 339 aa17.13■□□□□ 0.33
ARHGEF1-202ENST00000347545 BICD2Q8TD16 824 aa17.13■□□□□ 0.33
ARHGEF1-202ENST00000347545 GOLPH3LQ9H4A5 285 aa17.13■□□□□ 0.33
ARHGEF1-202ENST00000347545 MYO5AQ9Y4I1 1855 aaKnown RBP17.13■□□□□ 0.33
ARHGEF1-202ENST00000347545 AKAP11Q9UKA4 1901 aa17.13■□□□□ 0.33
ARHGEF1-202ENST00000347545 ERVV-2B6SEH9 535 aa17.12■□□□□ 0.33
ARHGEF1-202ENST00000347545 HMGB1P09429 215 aaKnown RBP17.12■□□□□ 0.33
ARHGEF1-202ENST00000347545 IFIT1P09914 478 aaKnown RBP17.12■□□□□ 0.33
ARHGEF1-202ENST00000347545 NKX1-1Q15270 411 aaPredicted RBP17.12■□□□□ 0.33
ARHGEF1-202ENST00000347545 OSBP2Q969R2 916 aa17.12■□□□□ 0.33
ARHGEF1-202ENST00000347545 ADORA1P30542 326 aa17.12■□□□□ 0.33
ARHGEF1-202ENST00000347545 CEBPZQ03701 1054 aaKnown RBP17.12■□□□□ 0.33
ARHGEF1-202ENST00000347545 NAA16Q6N069 864 aaPredicted RBP17.12■□□□□ 0.33
ARHGEF1-202ENST00000347545 CADPS2Q86UW7 1296 aa17.12■□□□□ 0.33
ARHGEF1-202ENST00000347545 GPHNQ9NQX3 736 aaPredicted RBP17.12■□□□□ 0.33
ARHGEF1-202ENST00000347545 PTGS1P23219 599 aa17.12■□□□□ 0.33
ARHGEF1-202ENST00000347545 TDRD7Q8NHU6 1098 aaKnown RBP17.12■□□□□ 0.33
ARHGEF1-202ENST00000347545 C4AP0C0L4 1744 aa17.11■□□□□ 0.33
ARHGEF1-202ENST00000347545 C4BP0C0L5 1744 aa17.11■□□□□ 0.33
ARHGEF1-202ENST00000347545 PDIA3P30101 505 aaKnown RBP17.11■□□□□ 0.33
ARHGEF1-202ENST00000347545 PLA2G4DQ86XP0 818 aa17.11■□□□□ 0.33
ARHGEF1-202ENST00000347545 TSC1Q92574 1164 aa17.11■□□□□ 0.33
ARHGEF1-202ENST00000347545 ISCA1Q9BUE6 129 aa17.11■□□□□ 0.33
ARHGEF1-202ENST00000347545 DNAJC25Q9H1X3 360 aa17.11■□□□□ 0.33
ARHGEF1-202ENST00000347545 DNTTIP2Q5QJE6 756 aaKnown RBP17.11■□□□□ 0.33
ARHGEF1-202ENST00000347545 FGD1P98174 961 aa17.1■□□□□ 0.33
ARHGEF1-202ENST00000347545 SCARF1Q14162 830 aa17.1■□□□□ 0.33
ARHGEF1-202ENST00000347545 ATG3Q9NT62 314 aa17.1■□□□□ 0.33
ARHGEF1-202ENST00000347545 RCOR1Q9UKL0 485 aa17.1■□□□□ 0.33
ARHGEF1-202ENST00000347545 TOM1L2Q6ZVM7 507 aa17.1■□□□□ 0.33
ARHGEF1-202ENST00000347545 BRINP3Q76B58 766 aa17.1■□□□□ 0.33
ARHGEF1-202ENST00000347545 TICAM2Q86XR7 235 aa17.1■□□□□ 0.33
ARHGEF1-202ENST00000347545 USP28Q96RU2 1077 aa17.1■□□□□ 0.33
ARHGEF1-202ENST00000347545 NRBP1Q9UHY1 535 aa17.1■□□□□ 0.33
ARHGEF1-202ENST00000347545 FDPSP14324 419 aaKnown RBP17.1■□□□□ 0.33
ARHGEF1-202ENST00000347545 ZNF75DP51815 510 aa17.1■□□□□ 0.33
ARHGEF1-202ENST00000347545 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.1■□□□□ 0.33
ARHGEF1-202ENST00000347545 SNW1Q13573 536 aaKnown RBP17.09■□□□□ 0.33
ARHGEF1-202ENST00000347545 PRDM10Q9NQV6 1147 aa17.09■□□□□ 0.33
ARHGEF1-202ENST00000347545 CFAP45Q9UL16 551 aa17.09■□□□□ 0.33
ARHGEF1-202ENST00000347545 ECM29Q5VYK3 1845 aa17.09■□□□□ 0.33
ARHGEF1-202ENST00000347545 RIC1Q4ADV7 1423 aa17.09■□□□□ 0.33
ARHGEF1-202ENST00000347545 C11orf57Q6ZUT1 292 aaPredicted RBP17.09■□□□□ 0.33
ARHGEF1-202ENST00000347545 PRIMPOLQ96LW4 560 aa17.09■□□□□ 0.33
ARHGEF1-202ENST00000347545 ITGB4P16144 1822 aa17.09■□□□□ 0.33
ARHGEF1-202ENST00000347545 GTF2F1P35269 517 aaKnown RBP eCLIP17.08■□□□□ 0.339e-7■■■■■ 27.5
ARHGEF1-202ENST00000347545 GUCY1B3Q02153 619 aa17.08■□□□□ 0.33
ARHGEF1-202ENST00000347545 CARMIL3Q8ND23 1372 aa17.08■□□□□ 0.33
ARHGEF1-202ENST00000347545 HMGN5P82970 282 aaKnown RBP17.08■□□□□ 0.32
ARHGEF1-202ENST00000347545 IQCB1Q15051 598 aa17.08■□□□□ 0.32
ARHGEF1-202ENST00000347545 ZNF710Q8N1W2 664 aa17.08■□□□□ 0.32
ARHGEF1-202ENST00000347545 ZNF274Q96GC6 653 aaPredicted RBP17.08■□□□□ 0.32
ARHGEF1-202ENST00000347545 PRDM11Q9NQV5 511 aa17.08■□□□□ 0.32
ARHGEF1-202ENST00000347545 TPM3P06753 285 aa17.07■□□□□ 0.32
ARHGEF1-202ENST00000347545 ZNF165P49910 485 aa17.07■□□□□ 0.32
ARHGEF1-202ENST00000347545 LRMPQ12912 555 aa17.07■□□□□ 0.32
ARHGEF1-202ENST00000347545 HSP90AB3PQ58FF7 597 aa17.07■□□□□ 0.32
ARHGEF1-202ENST00000347545 CCAR1Q8IX12 1150 aaKnown RBP17.07■□□□□ 0.32
ARHGEF1-202ENST00000347545 XAGE2Q96GT9 111 aa17.07■□□□□ 0.32
ARHGEF1-202ENST00000347545 MYH3P11055 1940 aa17.07■□□□□ 0.32
ARHGEF1-202ENST00000347545 A0A087WWV3 80 aa17.07■□□□□ 0.32
ARHGEF1-202ENST00000347545 EVCP57679 992 aa17.07■□□□□ 0.32
ARHGEF1-202ENST00000347545 FKBP4Q02790 459 aaKnown RBP eCLIP17.07■□□□□ 0.32
ARHGEF1-202ENST00000347545 CCDC186Q7Z3E2 898 aa17.07■□□□□ 0.32
ARHGEF1-202ENST00000347545 ENGASEQ8NFI3 743 aa17.07■□□□□ 0.32
ARHGEF1-202ENST00000347545 ANKRD36CQ5JPF3 1778 aa17.07■□□□□ 0.32
ARHGEF1-202ENST00000347545 PI16Q6UXB8 463 aa17.07■□□□□ 0.32
ARHGEF1-202ENST00000347545 FBXL16Q8N461 479 aa17.07■□□□□ 0.32
ARHGEF1-202ENST00000347545 CCDC85AQ96PX6 553 aaPredicted RBP17.07■□□□□ 0.32
ARHGEF1-202ENST00000347545 TCIRG1Q13488 830 aa17.06■□□□□ 0.32
ARHGEF1-202ENST00000347545 HAND2P61296 217 aa17.06■□□□□ 0.32
ARHGEF1-202ENST00000347545 CEP126Q9P2H0 1117 aa17.06■□□□□ 0.32
ARHGEF1-202ENST00000347545 GOLGA6L6A8MZA4 724 aa17.05■□□□□ 0.32
ARHGEF1-202ENST00000347545 IL2RBP14784 551 aa17.05■□□□□ 0.32
ARHGEF1-202ENST00000347545 SYNE4Q8N205 404 aa17.05■□□□□ 0.32
ARHGEF1-202ENST00000347545 NAP1L2Q9ULW6 460 aaPredicted RBP17.05■□□□□ 0.32
ARHGEF1-202ENST00000347545 FAM177BA6PVY3 158 aa17.05■□□□□ 0.32
ARHGEF1-202ENST00000347545 ANTXR2P58335 489 aa17.05■□□□□ 0.32
ARHGEF1-202ENST00000347545 CCDC144BQ3MJ40 725 aa17.05■□□□□ 0.32
ARHGEF1-202ENST00000347545 CCDC144CPQ8IYA2 1237 aa17.05■□□□□ 0.32
ARHGEF1-202ENST00000347545 NKX2-3Q8TAU0 364 aa17.05■□□□□ 0.32
ARHGEF1-202ENST00000347545 FAM89AQ96GI7 184 aa17.05■□□□□ 0.32
ARHGEF1-202ENST00000347545 PUS7LQ9H0K6 701 aaKnown RBP17.05■□□□□ 0.32
ARHGEF1-202ENST00000347545 PODXL2Q9NZ53 605 aa17.05■□□□□ 0.32
ARHGEF1-202ENST00000347545 HPS5Q9UPZ3 1129 aa17.05■□□□□ 0.32
ARHGEF1-202ENST00000347545 ZAP70P43403 619 aa17.05■□□□□ 0.32
ARHGEF1-202ENST00000347545 TRIM5Q9C035 493 aa17.05■□□□□ 0.32
ARHGEF1-202ENST00000347545 PRDM4Q9UKN5 801 aa17.05■□□□□ 0.32
ARHGEF1-202ENST00000347545 CCDC57Q2TAC2 916 aa17.04■□□□□ 0.32
ARHGEF1-202ENST00000347545 TTC39AQ5SRH9 613 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms