RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 RFX7Q2KHR2 1363 aa16.34■□□□□ 0.21
CDC42-202ENST00000344548 A0A0G2JLW4 131 aa16.34■□□□□ 0.21
CDC42-202ENST00000344548 BCAMP50895 628 aa16.34■□□□□ 0.21
CDC42-202ENST00000344548 ZMYM1Q5SVZ6 1142 aa16.34■□□□□ 0.21
CDC42-202ENST00000344548 ANKRD18AQ8IVF6 992 aa16.34■□□□□ 0.21
CDC42-202ENST00000344548 NLRP3Q96P20 1036 aa16.34■□□□□ 0.21
CDC42-202ENST00000344548 MINPP1Q9UNW1 487 aa16.34■□□□□ 0.21
CDC42-202ENST00000344548 M0R2C6 588 aa16.34■□□□□ 0.21
CDC42-202ENST00000344548 SLC27A2O14975 620 aa16.34■□□□□ 0.21
CDC42-202ENST00000344548 HSP90B1P14625 803 aaKnown RBP16.34■□□□□ 0.21
CDC42-202ENST00000344548 ZGPATQ8N5A5 531 aaKnown RBP16.34■□□□□ 0.21
CDC42-202ENST00000344548 CDC5LQ99459 802 aaKnown RBP16.34■□□□□ 0.21
CDC42-202ENST00000344548 PIH1D3Q9NQM4 214 aaKnown RBP16.34■□□□□ 0.21
CDC42-202ENST00000344548 MAST3O60307 1309 aa16.34■□□□□ 0.21
CDC42-202ENST00000344548 RNF113AO15541 343 aaKnown RBP16.33■□□□□ 0.2
CDC42-202ENST00000344548 ADRA2BP18089 450 aa16.33■□□□□ 0.2
CDC42-202ENST00000344548 HMG20BQ9P0W2 317 aa16.33■□□□□ 0.2
CDC42-202ENST00000344548 ARID4AP29374 1257 aaPredicted RBP16.33■□□□□ 0.2
CDC42-202ENST00000344548 RASGRF1Q13972 1273 aa16.33■□□□□ 0.2
CDC42-202ENST00000344548 PRR5LQ6MZQ0 368 aa16.33■□□□□ 0.2
CDC42-202ENST00000344548 TMX3Q96JJ7 454 aa16.33■□□□□ 0.2
CDC42-202ENST00000344548 ZNF512BQ96KM6 892 aaPredicted RBP16.33■□□□□ 0.2
CDC42-202ENST00000344548 TTC14Q96N46 770 aa16.33■□□□□ 0.2
CDC42-202ENST00000344548 BSDC1Q9NW68 430 aaPredicted RBP16.33■□□□□ 0.2
CDC42-202ENST00000344548 SSFA2P28290 1259 aa16.32■□□□□ 0.2
CDC42-202ENST00000344548 KCNJ4P48050 445 aa16.32■□□□□ 0.2
CDC42-202ENST00000344548 CARMIL3Q8ND23 1372 aa16.32■□□□□ 0.2
CDC42-202ENST00000344548 PLSCR1O15162 318 aa16.31■□□□□ 0.2
CDC42-202ENST00000344548 FOXP2O15409 715 aa16.31■□□□□ 0.2
CDC42-202ENST00000344548 HSP90AA1P07900 732 aaKnown RBP16.31■□□□□ 0.2
CDC42-202ENST00000344548 SLC5A1P13866 664 aa16.31■□□□□ 0.2
CDC42-202ENST00000344548 CASTP20810 708 aaKnown RBP16.31■□□□□ 0.2
CDC42-202ENST00000344548 KLRK1P26718 216 aa16.31■□□□□ 0.2
CDC42-202ENST00000344548 DDR1Q08345 913 aa16.31■□□□□ 0.2
CDC42-202ENST00000344548 JAKMIP1Q96N16 626 aaKnown RBP16.31■□□□□ 0.2
CDC42-202ENST00000344548 PUS7LQ9H0K6 701 aaKnown RBP16.31■□□□□ 0.2
CDC42-202ENST00000344548 IQSEC3Q9UPP2 1182 aaPredicted RBP16.31■□□□□ 0.2
CDC42-202ENST00000344548 ARAP2Q8WZ64 1704 aa16.31■□□□□ 0.2
CDC42-202ENST00000344548 RPS8P62241 208 aaKnown RBP16.31■□□□□ 0.2
CDC42-202ENST00000344548 CHMP5Q9NZZ3 219 aa16.31■□□□□ 0.2
CDC42-202ENST00000344548 A0A1B0GUL6 1792 aa16.31■□□□□ 0.2
CDC42-202ENST00000344548 NPHP1O15259 732 aa16.3■□□□□ 0.2
CDC42-202ENST00000344548 DTNBO60941 627 aa16.3■□□□□ 0.2
CDC42-202ENST00000344548 GYG1P46976 350 aa16.3■□□□□ 0.2
CDC42-202ENST00000344548 CNBD1Q8NA66 436 aa16.3■□□□□ 0.2
CDC42-202ENST00000344548 AKT1S1Q96B36 256 aa16.3■□□□□ 0.2
CDC42-202ENST00000344548 HELLSQ9NRZ9 838 aa16.3■□□□□ 0.2
CDC42-202ENST00000344548 AK2P54819 239 aa16.3■□□□□ 0.2
CDC42-202ENST00000344548 COL23A1Q86Y22 540 aaPredicted RBP16.3■□□□□ 0.2
CDC42-202ENST00000344548 TCEANC2Q96MN5 208 aa16.3■□□□□ 0.2
CDC42-202ENST00000344548 SERPINB2P05120 415 aa16.29■□□□□ 0.2
CDC42-202ENST00000344548 CYP21A2P08686 494 aa16.29■□□□□ 0.2
CDC42-202ENST00000344548 PKP1Q13835 747 aa16.29■□□□□ 0.2
CDC42-202ENST00000344548 SPATA5Q8NB90 893 aa16.29■□□□□ 0.2
CDC42-202ENST00000344548 ZSWIM6Q9HCJ5 1215 aa16.29■□□□□ 0.2
CDC42-202ENST00000344548 TFCP2L1Q9NZI6 479 aa16.29■□□□□ 0.2
CDC42-202ENST00000344548 WWC3Q9ULE0 1092 aa16.29■□□□□ 0.2
CDC42-202ENST00000344548 HSPD1P10809 573 aaKnown RBP16.29■□□□□ 0.2
CDC42-202ENST00000344548 WASHC4Q2M389 1173 aa16.29■□□□□ 0.2
CDC42-202ENST00000344548 RUFY3Q7L099 469 aa16.29■□□□□ 0.2
CDC42-202ENST00000344548 RPAP1Q9BWH6 1393 aaPredicted RBP16.28■□□□□ 0.2
CDC42-202ENST00000344548 IDH1O75874 414 aaKnown RBP16.28■□□□□ 0.2
CDC42-202ENST00000344548 TTLL5Q6EMB2 1281 aa16.28■□□□□ 0.2
CDC42-202ENST00000344548 LARGE1O95461 756 aa16.28■□□□□ 0.2
CDC42-202ENST00000344548 ADD2P35612 726 aa16.28■□□□□ 0.2
CDC42-202ENST00000344548 SLC9C2Q5TAH2 1124 aa16.28■□□□□ 0.2
CDC42-202ENST00000344548 GOLGB1Q14789 3259 aaKnown RBP16.27■□□□□ 0.2
CDC42-202ENST00000344548 POLRMTO00411 1230 aaKnown RBP16.27■□□□□ 0.2
CDC42-202ENST00000344548 UQCRFS1P1P0C7P4 283 aa16.27■□□□□ 0.2
CDC42-202ENST00000344548 STOX1Q6ZVD7 989 aa16.27■□□□□ 0.2
CDC42-202ENST00000344548 TXNRD3Q86VQ6 643 aa16.27■□□□□ 0.2
CDC42-202ENST00000344548 ZKSCAN1P17029 563 aaPredicted RBP16.26■□□□□ 0.19
CDC42-202ENST00000344548 COL1A1P02452 1464 aaPredicted RBP16.26■□□□□ 0.19
CDC42-202ENST00000344548 TCRBV5S4A2TA0A5A2 114 aa16.26■□□□□ 0.19
CDC42-202ENST00000344548 CUL4AQ13619 759 aa16.26■□□□□ 0.19
CDC42-202ENST00000344548 APPBP2Q92624 585 aa16.26■□□□□ 0.19
CDC42-202ENST00000344548 FAM84BQ96KN1 310 aaPredicted RBP16.26■□□□□ 0.19
CDC42-202ENST00000344548 TM6SF1Q9BZW5 370 aa16.26■□□□□ 0.19
CDC42-202ENST00000344548 MYH7P12883 1935 aa16.25■□□□□ 0.19
CDC42-202ENST00000344548 ZNF804BA4D1E1 1349 aa16.25■□□□□ 0.19
CDC42-202ENST00000344548 ZNF532Q9HCE3 1301 aa16.25■□□□□ 0.19
CDC42-202ENST00000344548 TNS1Q9HBL0 1735 aaKnown RBP16.25■□□□□ 0.19
CDC42-202ENST00000344548 PDE6AP16499 860 aa16.25■□□□□ 0.19
CDC42-202ENST00000344548 UBE4AQ14139 1066 aa16.25■□□□□ 0.19
CDC42-202ENST00000344548 TSGA10IPQ3SY00 556 aa16.25■□□□□ 0.19
CDC42-202ENST00000344548 DSCC1Q9BVC3 393 aa16.25■□□□□ 0.19
CDC42-202ENST00000344548 PDRG1Q9NUG6 133 aa16.25■□□□□ 0.19
CDC42-202ENST00000344548 U3KPZ7 1027 aaPredicted RBP16.25■□□□□ 0.19
CDC42-202ENST00000344548 GPAA1O43292 621 aa16.24■□□□□ 0.19
CDC42-202ENST00000344548 ZFYP08048 801 aaPredicted RBP16.24■□□□□ 0.19
CDC42-202ENST00000344548 TNPO1Q92973 898 aaKnown RBP16.24■□□□□ 0.19
CDC42-202ENST00000344548 CYP46A1Q9Y6A2 500 aa16.24■□□□□ 0.19
CDC42-202ENST00000344548 MCM2P49736 904 aa16.24■□□□□ 0.19
CDC42-202ENST00000344548 RAB3GAP1Q15042 981 aa16.24■□□□□ 0.19
CDC42-202ENST00000344548 CRY2Q49AN0 593 aa16.24■□□□□ 0.19
CDC42-202ENST00000344548 TICAM2Q86XR7 235 aa16.24■□□□□ 0.19
CDC42-202ENST00000344548 ANO8Q9HCE9 1232 aaPredicted RBP16.24■□□□□ 0.19
CDC42-202ENST00000344548 EN1Q05925 392 aaPredicted RBP16.23■□□□□ 0.19
CDC42-202ENST00000344548 ST3GAL1Q11201 340 aa16.23■□□□□ 0.19
CDC42-202ENST00000344548 TTF1Q15361 905 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms