RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 IFFO2Q5TF58 517 aa25.28■■□□□ 1.64
CCDC38-201ENST00000344280 MCM5P33992 734 aa25.28■■□□□ 1.64
CCDC38-201ENST00000344280 IFIT5Q13325 482 aaKnown RBP25.28■■□□□ 1.64
CCDC38-201ENST00000344280 UBE2Q2Q8WVN8 375 aa25.28■■□□□ 1.64
CCDC38-201ENST00000344280 PLA2G12BQ9BX93 195 aa25.28■■□□□ 1.64
CCDC38-201ENST00000344280 KAT6BQ8WYB5 2073 aa25.27■■□□□ 1.64
CCDC38-201ENST00000344280 ZAP70P43403 619 aa25.27■■□□□ 1.64
CCDC38-201ENST00000344280 TAF7LQ5H9L4 462 aa25.27■■□□□ 1.64
CCDC38-201ENST00000344280 VSIG10Q8N0Z9 540 aa25.27■■□□□ 1.64
CCDC38-201ENST00000344280 NUP62CLQ9H1M0 184 aa25.27■■□□□ 1.64
CCDC38-201ENST00000344280 MAP3K15Q6ZN16 1313 aa25.27■■□□□ 1.64
CCDC38-201ENST00000344280 STARD3NLO95772 234 aa25.26■■□□□ 1.63
CCDC38-201ENST00000344280 GIGYF2Q6Y7W6 1299 aaKnown RBP25.26■■□□□ 1.63
CCDC38-201ENST00000344280 CKAP2LQ8IYA6 745 aa25.26■■□□□ 1.63
CCDC38-201ENST00000344280 GPHNQ9NQX3 736 aaPredicted RBP25.26■■□□□ 1.63
CCDC38-201ENST00000344280 AKAP2Q9Y2D5 859 aa25.26■■□□□ 1.63
CCDC38-201ENST00000344280 PTPDC1A2A3K4 754 aa25.26■■□□□ 1.63
CCDC38-201ENST00000344280 PLCB2Q00722 1185 aa25.26■■□□□ 1.63
CCDC38-201ENST00000344280 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.26■■□□□ 1.63
CCDC38-201ENST00000344280 NAP1L2Q9ULW6 460 aaPredicted RBP25.26■■□□□ 1.63
CCDC38-201ENST00000344280 GOLGA6L4A6NEF3 574 aa25.25■■□□□ 1.63
CCDC38-201ENST00000344280 HAND2P61296 217 aa25.25■■□□□ 1.63
CCDC38-201ENST00000344280 WASHC4Q2M389 1173 aa25.25■■□□□ 1.63
CCDC38-201ENST00000344280 TICAM2Q86XR7 235 aa25.25■■□□□ 1.63
CCDC38-201ENST00000344280 LLPHQ9BRT6 129 aaKnown RBP25.25■■□□□ 1.63
CCDC38-201ENST00000344280 TEX13AQ9BXU3 409 aaPredicted RBP25.25■■□□□ 1.63
CCDC38-201ENST00000344280 GREM2Q9H772 168 aa25.25■■□□□ 1.63
CCDC38-201ENST00000344280 SPEF2Q9C093 1822 aa25.25■■□□□ 1.63
CCDC38-201ENST00000344280 CCDC192P0DO97 292 aa25.25■■□□□ 1.63
CCDC38-201ENST00000344280 MAP3K11Q16584 847 aa25.25■■□□□ 1.63
CCDC38-201ENST00000344280 RIC1Q4ADV7 1423 aa25.25■■□□□ 1.63
CCDC38-201ENST00000344280 NLRP10Q86W26 655 aa25.25■■□□□ 1.63
CCDC38-201ENST00000344280 FTOQ9C0B1 505 aaKnown RBP eCLIP25.25■■□□□ 1.63
CCDC38-201ENST00000344280 PUS7LQ9H0K6 701 aaKnown RBP25.25■■□□□ 1.63
CCDC38-201ENST00000344280 NR1I2O75469 434 aa25.24■■□□□ 1.63
CCDC38-201ENST00000344280 CEBPZQ03701 1054 aaKnown RBP25.24■■□□□ 1.63
CCDC38-201ENST00000344280 FBXO3Q9UK99 471 aa25.24■■□□□ 1.63
CCDC38-201ENST00000344280 PDIA3P30101 505 aaKnown RBP25.24■■□□□ 1.63
CCDC38-201ENST00000344280 TTLL11Q8NHH1 800 aa25.24■■□□□ 1.63
CCDC38-201ENST00000344280 RIPOR2Q9Y4F9 1068 aa25.24■■□□□ 1.63
CCDC38-201ENST00000344280 MRVI1Q9Y6F6 885 aa25.24■■□□□ 1.63
CCDC38-201ENST00000344280 ITGA6P23229 1130 aa25.23■■□□□ 1.63
CCDC38-201ENST00000344280 ADD1P35611 737 aaKnown RBP25.23■■□□□ 1.63
CCDC38-201ENST00000344280 ITGB4P16144 1822 aa25.23■■□□□ 1.63
CCDC38-201ENST00000344280 NWD2Q9ULI1 1742 aa25.23■■□□□ 1.63
CCDC38-201ENST00000344280 TNMDQ9H2S6 317 aa25.23■■□□□ 1.63
CCDC38-201ENST00000344280 ZBTB1Q9Y2K1 713 aa25.23■■□□□ 1.63
CCDC38-201ENST00000344280 R3HCC1Q9Y3T6 440 aaKnown RBP25.23■■□□□ 1.63
CCDC38-201ENST00000344280 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.22■■□□□ 1.63
CCDC38-201ENST00000344280 FGAP02671 866 aa25.22■■□□□ 1.63
CCDC38-201ENST00000344280 TYRO3Q06418 890 aa25.22■■□□□ 1.63
CCDC38-201ENST00000344280 TTC12Q9H892 705 aaPredicted RBP25.22■■□□□ 1.63
CCDC38-201ENST00000344280 SALL1Q9NSC2 1324 aa25.22■■□□□ 1.63
CCDC38-201ENST00000344280 CYP19A1P11511 503 aaPredicted RBP25.21■■□□□ 1.63
CCDC38-201ENST00000344280 METTL24Q5JXM2 366 aa25.21■■□□□ 1.63
CCDC38-201ENST00000344280 LDHAL6AQ6ZMR3 332 aa25.21■■□□□ 1.63
CCDC38-201ENST00000344280 BICD2Q8TD16 824 aa25.21■■□□□ 1.63
CCDC38-201ENST00000344280 ZSCAN16Q9H4T2 348 aaPredicted RBP25.21■■□□□ 1.63
CCDC38-201ENST00000344280 MCAMP43121 646 aa25.21■■□□□ 1.63
CCDC38-201ENST00000344280 ATP2B3Q16720 1220 aa25.21■■□□□ 1.63
CCDC38-201ENST00000344280 KLHL34Q8N239 644 aa25.21■■□□□ 1.63
CCDC38-201ENST00000344280 GUCY1B3Q02153 619 aa25.2■■□□□ 1.63
CCDC38-201ENST00000344280 SYTL4Q96C24 671 aaPredicted RBP25.2■■□□□ 1.62
CCDC38-201ENST00000344280 NHSL1Q5SYE7 1610 aa25.2■■□□□ 1.62
CCDC38-201ENST00000344280 CDHR2Q9BYE9 1310 aa25.2■■□□□ 1.62
CCDC38-201ENST00000344280 BCL9O00512 1426 aa25.19■■□□□ 1.62
CCDC38-201ENST00000344280 CTSWP56202 376 aa25.19■■□□□ 1.62
CCDC38-201ENST00000344280 NAA16Q6N069 864 aaPredicted RBP25.19■■□□□ 1.62
CCDC38-201ENST00000344280 CLSTN2Q9H4D0 955 aa25.19■■□□□ 1.62
CCDC38-201ENST00000344280 HMGN5P82970 282 aaKnown RBP25.19■■□□□ 1.62
CCDC38-201ENST00000344280 LUZP1Q86V48 1076 aa25.19■■□□□ 1.62
CCDC38-201ENST00000344280 FAM200AQ8TCP9 573 aa25.19■■□□□ 1.62
CCDC38-201ENST00000344280 APPBP2Q92624 585 aa25.19■■□□□ 1.62
CCDC38-201ENST00000344280 ZNF274Q96GC6 653 aaPredicted RBP25.19■■□□□ 1.62
CCDC38-201ENST00000344280 DDX19AQ9NUU7 478 aaKnown RBP25.19■■□□□ 1.62
CCDC38-201ENST00000344280 ZFYP08048 801 aaPredicted RBP25.18■■□□□ 1.62
CCDC38-201ENST00000344280 FDPSP14324 419 aaKnown RBP25.18■■□□□ 1.62
CCDC38-201ENST00000344280 IRS4O14654 1257 aaPredicted RBP25.17■■□□□ 1.62
CCDC38-201ENST00000344280 RBM43Q6ZSC3 357 aaKnown RBP25.17■■□□□ 1.62
CCDC38-201ENST00000344280 TBC1D2BQ9UPU7 963 aa25.17■■□□□ 1.62
CCDC38-201ENST00000344280 DISP2A7MBM2 1401 aa25.17■■□□□ 1.62
CCDC38-201ENST00000344280 GPAA1O43292 621 aa25.17■■□□□ 1.62
CCDC38-201ENST00000344280 KIAA2012Q0VF49 1180 aa25.17■■□□□ 1.62
CCDC38-201ENST00000344280 IMMTQ16891 758 aaKnown RBP25.17■■□□□ 1.62
CCDC38-201ENST00000344280 ILDR1Q86SU0 546 aaPredicted RBP25.17■■□□□ 1.62
CCDC38-201ENST00000344280 VGLL2Q8N8G2 317 aa25.17■■□□□ 1.62
CCDC38-201ENST00000344280 CNNM1Q9NRU3 951 aa25.17■■□□□ 1.62
CCDC38-201ENST00000344280 TRMT112Q9UI30 125 aaKnown RBP25.17■■□□□ 1.62
CCDC38-201ENST00000344280 CFAP45Q9UL16 551 aa25.17■■□□□ 1.62
CCDC38-201ENST00000344280 LRRFIP1Q32MZ4 808 aaKnown RBP25.16■■□□□ 1.62
CCDC38-201ENST00000344280 ANO6Q4KMQ2 910 aa25.16■■□□□ 1.62
CCDC38-201ENST00000344280 C17orf53Q8N3J3 647 aaPredicted RBP25.16■■□□□ 1.62
CCDC38-201ENST00000344280 TPM2P07951 284 aa25.16■■□□□ 1.62
CCDC38-201ENST00000344280 RAB11FIP4Q86YS3 637 aa25.16■■□□□ 1.62
CCDC38-201ENST00000344280 USP28Q96RU2 1077 aa25.16■■□□□ 1.62
CCDC38-201ENST00000344280 CTNNA3Q9UI47 895 aa25.16■■□□□ 1.62
CCDC38-201ENST00000344280 AKAP11Q9UKA4 1901 aa25.16■■□□□ 1.62
CCDC38-201ENST00000344280 KDM4FA0A1W2PPD8 638 aa25.15■■□□□ 1.62
CCDC38-201ENST00000344280 ANKRD18BA2A2Z9 1011 aa25.15■■□□□ 1.62
CCDC38-201ENST00000344280 LRP6O75581 1613 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms