RNA–Protein interactions for RNA: ENST00000343256.9

MUC1-204, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-204ENST00000343256 BRCA2P51587 3418 aa23.08■■□□□ 1.29
MUC1-204ENST00000343256 ATP2B4P23634 1241 aa23.08■■□□□ 1.29
MUC1-204ENST00000343256 TRIM28Q13263 835 aaKnown RBP23.08■■□□□ 1.29
MUC1-204ENST00000343256 DACT2Q5SW24 774 aa23.08■■□□□ 1.29
MUC1-204ENST00000343256 LDLRAD1Q5T700 205 aa23.08■■□□□ 1.29
MUC1-204ENST00000343256 CD99L2Q8TCZ2 262 aa23.08■■□□□ 1.29
MUC1-204ENST00000343256 ZNF646O15015 1829 aaPredicted RBP23.08■■□□□ 1.28
MUC1-204ENST00000343256 IGF2BP3O00425 579 aaKnown RBP eCLIP23.07■■□□□ 1.28
MUC1-204ENST00000343256 TMPOP42166 694 aaKnown RBP23.07■■□□□ 1.28
MUC1-204ENST00000343256 CCDC152Q4G0S7 254 aa23.07■■□□□ 1.28
MUC1-204ENST00000343256 OGFOD1Q8N543 542 aa23.07■■□□□ 1.28
MUC1-204ENST00000343256 DBF4Q9UBU7 674 aaPredicted RBP23.07■■□□□ 1.28
MUC1-204ENST00000343256 MANSC4A6NHS7 340 aaPredicted RBP23.06■■□□□ 1.28
MUC1-204ENST00000343256 ANKRD18AQ8IVF6 992 aa23.06■■□□□ 1.28
MUC1-204ENST00000343256 CHL1O00533 1208 aa23.05■■□□□ 1.28
MUC1-204ENST00000343256 CAP1Q01518 475 aa23.04■■□□□ 1.28
MUC1-204ENST00000343256 LMOD3Q0VAK6 560 aa23.04■■□□□ 1.28
MUC1-204ENST00000343256 NEUROD2Q15784 382 aa23.04■■□□□ 1.28
MUC1-204ENST00000343256 RIC3Q7Z5B4 369 aa23.04■■□□□ 1.28
MUC1-204ENST00000343256 ARMC5Q96C12 935 aa23.04■■□□□ 1.28
MUC1-204ENST00000343256 SLC10A4Q96EP9 437 aa23.04■■□□□ 1.28
MUC1-204ENST00000343256 ERO1AQ96HE7 468 aa23.04■■□□□ 1.28
MUC1-204ENST00000343256 CLMNQ96JQ2 1002 aa23.04■■□□□ 1.28
MUC1-204ENST00000343256 MYD88Q99836 296 aa23.04■■□□□ 1.28
MUC1-204ENST00000343256 PDE8AO60658 829 aa23.03■■□□□ 1.28
MUC1-204ENST00000343256 APOBEC3FQ8IUX4 373 aaKnown RBP23.03■■□□□ 1.28
MUC1-204ENST00000343256 WNK4Q96J92 1243 aa23.03■■□□□ 1.28
MUC1-204ENST00000343256 HYPKQ9NX55 129 aa23.03■■□□□ 1.28
MUC1-204ENST00000343256 MED23Q9ULK4 1368 aa23.02■■□□□ 1.28
MUC1-204ENST00000343256 INHBEP58166 350 aa23.02■■□□□ 1.28
MUC1-204ENST00000343256 CRHR2Q13324 411 aa23.02■■□□□ 1.28
MUC1-204ENST00000343256 EFCC1Q9HA90 598 aa23.02■■□□□ 1.28
MUC1-204ENST00000343256 STRIP1Q5VSL9 837 aa23.01■■□□□ 1.27
MUC1-204ENST00000343256 KIAA0825Q8IV33 1275 aa23.01■■□□□ 1.27
MUC1-204ENST00000343256 MYO3BQ8WXR4 1341 aa23.01■■□□□ 1.27
MUC1-204ENST00000343256 SPEF2Q9C093 1822 aa23.01■■□□□ 1.27
MUC1-204ENST00000343256 PCCAP05165 728 aaPredicted RBP23■■□□□ 1.27
MUC1-204ENST00000343256 HSP90B1P14625 803 aaKnown RBP23■■□□□ 1.27
MUC1-204ENST00000343256 TXNRD3Q86VQ6 643 aa23■■□□□ 1.27
MUC1-204ENST00000343256 TMEM106CQ9BVX2 250 aa23■■□□□ 1.27
MUC1-204ENST00000343256 PHAXQ9H814 394 aaKnown RBP23■■□□□ 1.27
MUC1-204ENST00000343256 SSC5DA1L4H1 1573 aa22.99■■□□□ 1.27
MUC1-204ENST00000343256 HOXB7P09629 217 aa22.99■■□□□ 1.27
MUC1-204ENST00000343256 ZBTB48P10074 688 aaPredicted RBP22.99■■□□□ 1.27
MUC1-204ENST00000343256 GOLGA2Q08379 1002 aa22.99■■□□□ 1.27
MUC1-204ENST00000343256 DEFB129Q9H1M3 183 aa22.99■■□□□ 1.27
MUC1-204ENST00000343256 MINPP1Q9UNW1 487 aa22.99■■□□□ 1.27
MUC1-204ENST00000343256 TRIOBPQ9H2D6 2365 aa22.99■■□□□ 1.27
MUC1-204ENST00000343256 CCT4P50991 539 aaKnown RBP22.98■■□□□ 1.27
MUC1-204ENST00000343256 DUSP27Q5VZP5 1158 aa22.98■■□□□ 1.27
MUC1-204ENST00000343256 CCDC146Q8IYE0 955 aa22.98■■□□□ 1.27
MUC1-204ENST00000343256 ZBED3Q96IU2 234 aaPredicted RBP22.98■■□□□ 1.27
MUC1-204ENST00000343256 COA1Q9GZY4 146 aa22.98■■□□□ 1.27
MUC1-204ENST00000343256 SZT2Q5T011 3432 aa22.98■■□□□ 1.27
MUC1-204ENST00000343256 LAMB1P07942 1786 aa22.97■■□□□ 1.27
MUC1-204ENST00000343256 MYCP01106 439 aaPredicted RBP22.97■■□□□ 1.27
MUC1-204ENST00000343256 GJA5P36382 358 aa22.97■■□□□ 1.27
MUC1-204ENST00000343256 SP3Q02447 781 aa22.97■■□□□ 1.27
MUC1-204ENST00000343256 MAP3K11Q16584 847 aa22.97■■□□□ 1.27
MUC1-204ENST00000343256 TTLL5Q6EMB2 1281 aa22.97■■□□□ 1.27
MUC1-204ENST00000343256 CCDC191Q8NCU4 936 aa22.97■■□□□ 1.27
MUC1-204ENST00000343256 ZNF333Q96JL9 665 aa22.97■■□□□ 1.27
MUC1-204ENST00000343256 H0YGN5 161 aa22.96■■□□□ 1.27
MUC1-204ENST00000343256 KLRK1P26718 216 aa22.96■■□□□ 1.27
MUC1-204ENST00000343256 CDC5LQ99459 802 aaKnown RBP22.96■■□□□ 1.27
MUC1-204ENST00000343256 PTPN18Q99952 460 aa22.96■■□□□ 1.27
MUC1-204ENST00000343256 CWC25Q9NXE8 425 aaPredicted RBP22.96■■□□□ 1.27
MUC1-204ENST00000343256 PCDHAC2Q9Y5I4 1007 aa22.96■■□□□ 1.27
MUC1-204ENST00000343256 OTUD5Q96G74 571 aa22.95■■□□□ 1.26
MUC1-204ENST00000343256 TRIM35Q9UPQ4 493 aa22.95■■□□□ 1.26
MUC1-204ENST00000343256 CEP290O15078 2479 aa22.94■■□□□ 1.26
MUC1-204ENST00000343256 COL1A1P02452 1464 aaPredicted RBP22.94■■□□□ 1.26
MUC1-204ENST00000343256 PPP1R12BO60237 982 aaPredicted RBP22.94■■□□□ 1.26
MUC1-204ENST00000343256 CTSWP56202 376 aa22.94■■□□□ 1.26
MUC1-204ENST00000343256 GTF2IP78347 998 aa22.94■■□□□ 1.26
MUC1-204ENST00000343256 SLC4A8Q2Y0W8 1093 aa22.94■■□□□ 1.26
MUC1-204ENST00000343256 OTUD7BQ6GQQ9 843 aa22.94■■□□□ 1.26
MUC1-204ENST00000343256 BSDC1Q9NW68 430 aaPredicted RBP22.94■■□□□ 1.26
MUC1-204ENST00000343256 PTCH2Q9Y6C5 1203 aa22.94■■□□□ 1.26
MUC1-204ENST00000343256 GREM2Q9H772 168 aa22.93■■□□□ 1.26
MUC1-204ENST00000343256 DLGAP5Q15398 846 aa22.92■■□□□ 1.26
MUC1-204ENST00000343256 SLC9C1Q4G0N8 1177 aa22.92■■□□□ 1.26
MUC1-204ENST00000343256 CHRDL2Q6WN34 429 aa22.92■■□□□ 1.26
MUC1-204ENST00000343256 CLRN2A0PK11 232 aa22.91■■□□□ 1.26
MUC1-204ENST00000343256 MMP14P50281 582 aa22.91■■□□□ 1.26
MUC1-204ENST00000343256 NBPF12Q5TAG4 269 aaPredicted RBP22.91■■□□□ 1.26
MUC1-204ENST00000343256 TTLL11Q8NHH1 800 aa22.91■■□□□ 1.26
MUC1-204ENST00000343256 METTL22Q9BUU2 404 aaPredicted RBP22.9■■□□□ 1.26
MUC1-204ENST00000343256 AOX1Q06278 1338 aa22.89■■□□□ 1.26
MUC1-204ENST00000343256 ELL2O00472 640 aaPredicted RBP22.89■■□□□ 1.25
MUC1-204ENST00000343256 DLL1O00548 723 aa22.89■■□□□ 1.25
MUC1-204ENST00000343256 USP2O75604 605 aaPredicted RBP22.89■■□□□ 1.25
MUC1-204ENST00000343256 NBPF11Q86T75 865 aa22.89■■□□□ 1.25
MUC1-204ENST00000343256 MBIPQ9NS73 344 aa22.89■■□□□ 1.25
MUC1-204ENST00000343256 LEMD3Q9Y2U8 911 aa22.89■■□□□ 1.25
MUC1-204ENST00000343256 ZNF804BA4D1E1 1349 aa22.88■■□□□ 1.25
MUC1-204ENST00000343256 ECM29Q5VYK3 1845 aa22.88■■□□□ 1.25
MUC1-204ENST00000343256 TESPA1A2RU30 521 aaPredicted RBP22.88■■□□□ 1.25
MUC1-204ENST00000343256 F8W031 263 aaPredicted RBP22.88■■□□□ 1.25
MUC1-204ENST00000343256 IREB2P48200 963 aaKnown RBP22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms