RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 IDEP14735 1019 aa18.03■□□□□ 0.48
HDAC5-202ENST00000336057 CCDC96Q2M329 555 aa18.03■□□□□ 0.48
HDAC5-202ENST00000336057 KRT222Q8N1A0 295 aa18.03■□□□□ 0.48
HDAC5-202ENST00000336057 FAM160A1Q05DH4 1040 aa18.02■□□□□ 0.48
HDAC5-202ENST00000336057 RRAGBQ5VZM2 374 aa18.02■□□□□ 0.48
HDAC5-202ENST00000336057 KLHL34Q8N239 644 aa18.02■□□□□ 0.48
HDAC5-202ENST00000336057 DBNDD2Q9BQY9 259 aa18.02■□□□□ 0.48
HDAC5-202ENST00000336057 ZSWIM4Q9H7M6 989 aa18.02■□□□□ 0.48
HDAC5-202ENST00000336057 SLU7O95391 586 aaKnown RBP18.02■□□□□ 0.48
HDAC5-202ENST00000336057 CCDC129Q6ZRS4 1044 aa18.02■□□□□ 0.48
HDAC5-202ENST00000336057 VPS36Q86VN1 386 aa18.02■□□□□ 0.48
HDAC5-202ENST00000336057 GADD45BO75293 160 aaPredicted RBP18.02■□□□□ 0.47
HDAC5-202ENST00000336057 SPAG1Q07617 926 aa18.02■□□□□ 0.47
HDAC5-202ENST00000336057 IQSEC3Q9UPP2 1182 aaPredicted RBP18.02■□□□□ 0.47
HDAC5-202ENST00000336057 TIMM10P62072 90 aa18.01■□□□□ 0.47
HDAC5-202ENST00000336057 FAM173BQ6P4H8 233 aa18.01■□□□□ 0.47
HDAC5-202ENST00000336057 C19orf44Q9H6X5 657 aa18.01■□□□□ 0.47
HDAC5-202ENST00000336057 TMEM63CQ9P1W3 806 aa18.01■□□□□ 0.47
HDAC5-202ENST00000336057 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.01■□□□□ 0.474e-10■■■■■ 39.8
HDAC5-202ENST00000336057 TRIM75PA6NK02 468 aa18.01■□□□□ 0.47
HDAC5-202ENST00000336057 LLPHQ9BRT6 129 aaKnown RBP18.01■□□□□ 0.47
HDAC5-202ENST00000336057 CALCOCO1Q9P1Z2 691 aa18.01■□□□□ 0.47
HDAC5-202ENST00000336057 TRIM47Q96LD4 638 aa18.01■□□□□ 0.47
HDAC5-202ENST00000336057 USP44Q9H0E7 712 aa18.01■□□□□ 0.47
HDAC5-202ENST00000336057 EYA2O00167 538 aa18.01■□□□□ 0.47
HDAC5-202ENST00000336057 IL2RBP14784 551 aa18.01■□□□□ 0.47
HDAC5-202ENST00000336057 PIP4K2BP78356 416 aa18.01■□□□□ 0.47
HDAC5-202ENST00000336057 PLBD2Q8NHP8 589 aa18.01■□□□□ 0.47
HDAC5-202ENST00000336057 SSH3Q8TE77 659 aa18.01■□□□□ 0.47
HDAC5-202ENST00000336057 SUCLG2Q96I99 432 aa18.01■□□□□ 0.47
HDAC5-202ENST00000336057 IFNKQ9P0W0 207 aa18.01■□□□□ 0.47
HDAC5-202ENST00000336057 EIF4A1P60842 406 aaKnown RBP18■□□□□ 0.47
HDAC5-202ENST00000336057 ANKRD18AQ8IVF6 992 aa18■□□□□ 0.47
HDAC5-202ENST00000336057 GNAT2P19087 354 aa18■□□□□ 0.47
HDAC5-202ENST00000336057 RPGRQ92834 1020 aaKnown RBP18■□□□□ 0.47
HDAC5-202ENST00000336057 SIRT1Q96EB6 747 aa18■□□□□ 0.47
HDAC5-202ENST00000336057 VAT1LQ9HCJ6 419 aa18■□□□□ 0.47
HDAC5-202ENST00000336057 ENOX2Q16206 610 aaKnown RBP18■□□□□ 0.47
HDAC5-202ENST00000336057 ALS2CR12Q96Q35 445 aa18■□□□□ 0.47
HDAC5-202ENST00000336057 TM6SF1Q9BZW5 370 aa18■□□□□ 0.47
HDAC5-202ENST00000336057 SSH2Q76I76 1423 aa18■□□□□ 0.47
HDAC5-202ENST00000336057 A0A1B0GVL5 298 aa17.99■□□□□ 0.47
HDAC5-202ENST00000336057 SRRTQ9BXP5 876 aaKnown RBP17.99■□□□□ 0.47
HDAC5-202ENST00000336057 TMOD2Q9NZR1 351 aa17.99■□□□□ 0.47
HDAC5-202ENST00000336057 STX8Q9UNK0 236 aa17.99■□□□□ 0.47
HDAC5-202ENST00000336057 PLA2R1Q13018 1463 aa17.99■□□□□ 0.47
HDAC5-202ENST00000336057 A0A1B0GUL7 405 aa17.99■□□□□ 0.47
HDAC5-202ENST00000336057 UBA5Q9GZZ9 404 aa17.99■□□□□ 0.47
HDAC5-202ENST00000336057 CLSTN2Q9H4D0 955 aa17.99■□□□□ 0.47
HDAC5-202ENST00000336057 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.99■□□□□ 0.47
HDAC5-202ENST00000336057 EHBP1Q8NDI1 1231 aa17.99■□□□□ 0.47
HDAC5-202ENST00000336057 IRS4O14654 1257 aaPredicted RBP17.98■□□□□ 0.47
HDAC5-202ENST00000336057 NAA16Q6N069 864 aaPredicted RBP17.98■□□□□ 0.47
HDAC5-202ENST00000336057 DHX58Q96C10 678 aa17.98■□□□□ 0.47
HDAC5-202ENST00000336057 STAT6P42226 847 aa17.98■□□□□ 0.47
HDAC5-202ENST00000336057 DNA2P51530 1060 aa17.98■□□□□ 0.47
HDAC5-202ENST00000336057 CCDC40Q4G0X9 1142 aa17.98■□□□□ 0.47
HDAC5-202ENST00000336057 NBPF6Q5VWK0 638 aa17.98■□□□□ 0.47
HDAC5-202ENST00000336057 NBPF4Q96M43 638 aa17.98■□□□□ 0.47
HDAC5-202ENST00000336057 SHTN1A0MZ66 631 aa17.98■□□□□ 0.47
HDAC5-202ENST00000336057 GTF2F1P35269 517 aaKnown RBP eCLIP17.98■□□□□ 0.47
HDAC5-202ENST00000336057 SLC4A8Q2Y0W8 1093 aa17.98■□□□□ 0.47
HDAC5-202ENST00000336057 UBE2Q2Q8WVN8 375 aa17.98■□□□□ 0.47
HDAC5-202ENST00000336057 TRIM21P19474 475 aaKnown RBP17.98■□□□□ 0.47
HDAC5-202ENST00000336057 TAX1BP1Q86VP1 789 aa17.98■□□□□ 0.47
HDAC5-202ENST00000336057 LEO1Q8WVC0 666 aaPredicted RBP17.98■□□□□ 0.47
HDAC5-202ENST00000336057 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.97■□□□□ 0.47
HDAC5-202ENST00000336057 V9GYY5 206 aaPredicted RBP17.97■□□□□ 0.47
HDAC5-202ENST00000336057 UGGT1Q9NYU2 1555 aa17.97■□□□□ 0.47
HDAC5-202ENST00000336057 HELBQ8NG08 1087 aaPredicted RBP17.97■□□□□ 0.47
HDAC5-202ENST00000336057 EXOC1Q9NV70 894 aa17.97■□□□□ 0.47
HDAC5-202ENST00000336057 RXRAP19793 462 aa17.97■□□□□ 0.47
HDAC5-202ENST00000336057 GCKRQ14397 625 aa17.97■□□□□ 0.47
HDAC5-202ENST00000336057 KBTBD3Q8NAB2 608 aa17.97■□□□□ 0.47
HDAC5-202ENST00000336057 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.97■□□□□ 0.47
HDAC5-202ENST00000336057 ARFGAP3Q9NP61 516 aa17.97■□□□□ 0.47
HDAC5-202ENST00000336057 ZHX1Q9UKY1 873 aaPredicted RBP17.97■□□□□ 0.47
HDAC5-202ENST00000336057 FAM135BQ49AJ0 1406 aa17.97■□□□□ 0.47
HDAC5-202ENST00000336057 DZIP3Q86Y13 1208 aaKnown RBP17.97■□□□□ 0.47
HDAC5-202ENST00000336057 MAGEB6Q8N7X4 407 aa17.97■□□□□ 0.47
HDAC5-202ENST00000336057 AATKQ6ZMQ8 1374 aa17.97■□□□□ 0.47
HDAC5-202ENST00000336057 HMGB2P26583 209 aaKnown RBP17.96■□□□□ 0.47
HDAC5-202ENST00000336057 GNAQP50148 359 aa17.96■□□□□ 0.47
HDAC5-202ENST00000336057 PALD1Q9ULE6 856 aa17.96■□□□□ 0.47
HDAC5-202ENST00000336057 CCDC175P0C221 793 aa17.96■□□□□ 0.47
HDAC5-202ENST00000336057 USP8P40818 1118 aa17.96■□□□□ 0.47
HDAC5-202ENST00000336057 CCDC178Q5BJE1 867 aa17.96■□□□□ 0.47
HDAC5-202ENST00000336057 IL17REQ8NFR9 667 aa17.96■□□□□ 0.47
HDAC5-202ENST00000336057 UTP14AQ9BVJ6 771 aaKnown RBP17.96■□□□□ 0.47
HDAC5-202ENST00000336057 JADE2Q9NQC1 790 aa17.96■□□□□ 0.47
HDAC5-202ENST00000336057 CALM1P0DP23 149 aa17.96■□□□□ 0.47
HDAC5-202ENST00000336057 CALM2P0DP24 149 aa17.96■□□□□ 0.47
HDAC5-202ENST00000336057 CALM3P0DP25 149 aa17.96■□□□□ 0.47
HDAC5-202ENST00000336057 SMARCC1Q92922 1105 aaPredicted RBP17.96■□□□□ 0.47
HDAC5-202ENST00000336057 CCDC94Q9BW85 323 aaPredicted RBP17.96■□□□□ 0.47
HDAC5-202ENST00000336057 RTL9Q8NET4 1388 aa17.96■□□□□ 0.47
HDAC5-202ENST00000336057 NEO1Q92859 1461 aa17.96■□□□□ 0.47
HDAC5-202ENST00000336057 PCDH11XQ9BZA7 1347 aa17.96■□□□□ 0.47
HDAC5-202ENST00000336057 PCDH11YQ9BZA8 1340 aa17.96■□□□□ 0.47
HDAC5-202ENST00000336057 PREX2Q70Z35 1606 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms