RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 AOX1Q06278 1338 aa10.69□□□□□ -0.7
COPB2-201ENST00000333188 ZNF532Q9HCE3 1301 aa10.69□□□□□ -0.7
COPB2-201ENST00000333188 PRKAB2O43741 272 aa10.69□□□□□ -0.7
COPB2-201ENST00000333188 RAD21O60216 631 aa10.69□□□□□ -0.7
COPB2-201ENST00000333188 PDE8BO95263 885 aa10.69□□□□□ -0.7
COPB2-201ENST00000333188 POLR3DP05423 398 aaPredicted RBP10.69□□□□□ -0.7
COPB2-201ENST00000333188 SLC5A1P13866 664 aa10.69□□□□□ -0.7
COPB2-201ENST00000333188 L1TD1Q5T7N2 865 aaKnown RBP10.69□□□□□ -0.7
COPB2-201ENST00000333188 ANKRD18AQ8IVF6 992 aa10.69□□□□□ -0.7
COPB2-201ENST00000333188 SEPT12Q8IYM1 358 aa10.69□□□□□ -0.7
COPB2-201ENST00000333188 CMTR1Q8N1G2 835 aaKnown RBP10.69□□□□□ -0.7
COPB2-201ENST00000333188 BICD2Q8TD16 824 aa10.69□□□□□ -0.7
COPB2-201ENST00000333188 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.69□□□□□ -0.72e-7■■■□□ 14.7
COPB2-201ENST00000333188 ZNF142P52746 1687 aaPredicted RBP10.69□□□□□ -0.7
COPB2-201ENST00000333188 MAST3O60307 1309 aa10.69□□□□□ -0.7
COPB2-201ENST00000333188 WDR33Q9C0J8 1336 aaKnown RBP10.69□□□□□ -0.7
COPB2-201ENST00000333188 CTDSPL2Q05D32 466 aa10.69□□□□□ -0.7
COPB2-201ENST00000333188 GRPEL1Q9HAV7 217 aa10.69□□□□□ -0.7
COPB2-201ENST00000333188 PIH1D3Q9NQM4 214 aaKnown RBP10.69□□□□□ -0.7
COPB2-201ENST00000333188 UTYO14607 1347 aa10.68□□□□□ -0.7
COPB2-201ENST00000333188 F8W031 263 aaPredicted RBP10.68□□□□□ -0.7
COPB2-201ENST00000333188 MBD4O95243 580 aa10.68□□□□□ -0.7
COPB2-201ENST00000333188 FGAP02671 866 aa10.68□□□□□ -0.7
COPB2-201ENST00000333188 IMMTQ16891 758 aaKnown RBP10.68□□□□□ -0.7
COPB2-201ENST00000333188 KLHL34Q8N239 644 aa10.68□□□□□ -0.7
COPB2-201ENST00000333188 SDR42E1Q8WUS8 393 aa10.68□□□□□ -0.7
COPB2-201ENST00000333188 CELF1Q92879 486 aaKnown RBP10.68□□□□□ -0.7
COPB2-201ENST00000333188 U3KPZ7 1027 aaPredicted RBP10.68□□□□□ -0.7
COPB2-201ENST00000333188 B4E1Z4 1266 aa10.68□□□□□ -0.7
COPB2-201ENST00000333188 EIF5P55010 431 aaKnown RBP10.68□□□□□ -0.7
COPB2-201ENST00000333188 CHRNDQ07001 517 aa10.68□□□□□ -0.7
COPB2-201ENST00000333188 CDC37L1Q7L3B6 337 aa10.68□□□□□ -0.7
COPB2-201ENST00000333188 NLRP3Q96P20 1036 aa10.68□□□□□ -0.7
COPB2-201ENST00000333188 NAPBQ9H115 298 aa10.68□□□□□ -0.7
COPB2-201ENST00000333188 AFF2P51816 1311 aa10.68□□□□□ -0.7
COPB2-201ENST00000333188 ERBB4Q15303 1308 aa10.68□□□□□ -0.7
COPB2-201ENST00000333188 SPATA31A5Q5VU36 1347 aa10.68□□□□□ -0.7
COPB2-201ENST00000333188 SPATA31A7Q8IWB4 1347 aa10.68□□□□□ -0.7
COPB2-201ENST00000333188 PPP1R1BQ9UD71 204 aaPredicted RBP10.68□□□□□ -0.7
COPB2-201ENST00000333188 CYP2E1P05181 493 aaPredicted RBP10.67□□□□□ -0.7
COPB2-201ENST00000333188 CYP7A1P22680 504 aa10.67□□□□□ -0.7
COPB2-201ENST00000333188 RPS6KB1P23443 525 aa10.67□□□□□ -0.7
COPB2-201ENST00000333188 STOX1Q6ZVD7 989 aa10.67□□□□□ -0.7
COPB2-201ENST00000333188 hCG_1642624A0A1W2PR95 340 aa10.67□□□□□ -0.7
COPB2-201ENST00000333188 GOLGA8BA8MQT2 603 aa10.67□□□□□ -0.7
COPB2-201ENST00000333188 AMIGO3Q86WK7 504 aa10.67□□□□□ -0.7
COPB2-201ENST00000333188 CKAP2LQ8IYA6 745 aa10.67□□□□□ -0.7
COPB2-201ENST00000333188 VSIG10Q8N0Z9 540 aa10.67□□□□□ -0.7
COPB2-201ENST00000333188 SMARCC1Q92922 1105 aaPredicted RBP10.67□□□□□ -0.7
COPB2-201ENST00000333188 FTOQ9C0B1 505 aaKnown RBP eCLIP10.67□□□□□ -0.71e-7■■■□□ 18.7
COPB2-201ENST00000333188 KLF18A0A0U1RQI7 1052 aa10.66□□□□□ -0.7
COPB2-201ENST00000333188 E7EWF7 191 aa10.66□□□□□ -0.7
COPB2-201ENST00000333188 G3V3G9 751 aa10.66□□□□□ -0.7
COPB2-201ENST00000333188 NASPP49321 788 aaPredicted RBP10.66□□□□□ -0.7
COPB2-201ENST00000333188 RASGRF1Q13972 1273 aa10.66□□□□□ -0.7
COPB2-201ENST00000333188 DCAF8Q5TAQ9 597 aa10.66□□□□□ -0.7
COPB2-201ENST00000333188 GPT2Q8TD30 523 aa10.66□□□□□ -0.7
COPB2-201ENST00000333188 LMBRD1Q9NUN5 540 aa10.66□□□□□ -0.7
COPB2-201ENST00000333188 CYP2D7A0A087X1C5 515 aa10.66□□□□□ -0.7
COPB2-201ENST00000333188 RIMBP2O15034 1052 aa10.66□□□□□ -0.7
COPB2-201ENST00000333188 ZSCAN22P10073 491 aaPredicted RBP10.66□□□□□ -0.7
COPB2-201ENST00000333188 KLRK1P26718 216 aa10.66□□□□□ -0.7
COPB2-201ENST00000333188 MAP3K12Q12852 859 aa10.66□□□□□ -0.7
COPB2-201ENST00000333188 PUM3Q15397 648 aaKnown RBP10.66□□□□□ -0.7
COPB2-201ENST00000333188 SF3A1Q15459 793 aaKnown RBP10.66□□□□□ -0.7
COPB2-201ENST00000333188 SKOR2Q2VWA4 1001 aaPredicted RBP10.66□□□□□ -0.7
COPB2-201ENST00000333188 TRAPPC3LQ5T215 181 aa10.66□□□□□ -0.7
COPB2-201ENST00000333188 GIMAP6Q6P9H5 292 aa10.66□□□□□ -0.7
COPB2-201ENST00000333188 ERCC4Q92889 916 aaPredicted RBP10.66□□□□□ -0.7
COPB2-201ENST00000333188 ZSWIM6Q9HCJ5 1215 aa10.66□□□□□ -0.7
COPB2-201ENST00000333188 RIPOR2Q9Y4F9 1068 aa10.66□□□□□ -0.7
COPB2-201ENST00000333188 SLC4A4Q9Y6R1 1079 aa10.66□□□□□ -0.7
COPB2-201ENST00000333188 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.66□□□□□ -0.7
COPB2-201ENST00000333188 SMIM22K7EJ46 135 aa10.66□□□□□ -0.7
COPB2-201ENST00000333188 LRRFIP1Q32MZ4 808 aaKnown RBP10.66□□□□□ -0.7
COPB2-201ENST00000333188 ZSCAN23Q3MJ62 389 aa10.66□□□□□ -0.7
COPB2-201ENST00000333188 SPATA5Q8NB90 893 aa10.66□□□□□ -0.7
COPB2-201ENST00000333188 CDC5LQ99459 802 aaKnown RBP10.66□□□□□ -0.7
COPB2-201ENST00000333188 HMG20BQ9P0W2 317 aa10.66□□□□□ -0.7
COPB2-201ENST00000333188 ZNF609O15014 1411 aa10.65□□□□□ -0.7
COPB2-201ENST00000333188 C6orf229H3BNL8 230 aa10.65□□□□□ -0.7
COPB2-201ENST00000333188 PRC1O43663 620 aa10.65□□□□□ -0.7
COPB2-201ENST00000333188 RANBP6O60518 1105 aaKnown RBP10.65□□□□□ -0.7
COPB2-201ENST00000333188 CAMTA2O94983 1202 aa10.65□□□□□ -0.7
COPB2-201ENST00000333188 CAVIN4Q5BKX8 364 aa10.65□□□□□ -0.7
COPB2-201ENST00000333188 ARHGEF1Q92888 912 aaKnown RBP10.65□□□□□ -0.7
COPB2-201ENST00000333188 TMEM63CQ9P1W3 806 aa10.65□□□□□ -0.7
COPB2-201ENST00000333188 MARF1Q9Y4F3 1742 aaKnown RBP10.65□□□□□ -0.7
COPB2-201ENST00000333188 TPTE2Q6XPS3 522 aa10.65□□□□□ -0.7
COPB2-201ENST00000333188 CDCA7Q9BWT1 371 aaPredicted RBP10.65□□□□□ -0.7
COPB2-201ENST00000333188 BCL11BQ9C0K0 894 aaPredicted RBP10.65□□□□□ -0.7
COPB2-201ENST00000333188 BCL9O00512 1426 aa10.64□□□□□ -0.71
COPB2-201ENST00000333188 A0A087WWV3 80 aa10.64□□□□□ -0.71
COPB2-201ENST00000333188 PDE6AP16499 860 aa10.64□□□□□ -0.71
COPB2-201ENST00000333188 LPIN2Q92539 896 aa10.64□□□□□ -0.71
COPB2-201ENST00000333188 PHKBQ93100 1093 aa10.64□□□□□ -0.71
COPB2-201ENST00000333188 PXDNLA1KZ92 1463 aa10.64□□□□□ -0.71
COPB2-201ENST00000333188 BRD1O95696 1058 aa10.64□□□□□ -0.71
COPB2-201ENST00000333188 F13A1P00488 732 aa10.64□□□□□ -0.71
COPB2-201ENST00000333188 KRT32Q14532 448 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms