RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 PRR5LQ6MZQ0 368 aa16.96■□□□□ 0.31
VRK3-201ENST00000316763 CNBD1Q8NA66 436 aa16.96■□□□□ 0.31
VRK3-201ENST00000316763 CCDC8Q9H0W5 538 aaPredicted RBP16.96■□□□□ 0.31
VRK3-201ENST00000316763 TLR7Q9NYK1 1049 aaKnown RBP16.96■□□□□ 0.31
VRK3-201ENST00000316763 LIMCH1Q9UPQ0 1083 aa16.96■□□□□ 0.31
VRK3-201ENST00000316763 RIPOR2Q9Y4F9 1068 aa16.96■□□□□ 0.31
VRK3-201ENST00000316763 NPHP1O15259 732 aa16.96■□□□□ 0.3
VRK3-201ENST00000316763 ZSCAN23Q3MJ62 389 aa16.96■□□□□ 0.3
VRK3-201ENST00000316763 CCDC152Q4G0S7 254 aa16.96■□□□□ 0.3
VRK3-201ENST00000316763 TAF7LQ5H9L4 462 aa16.96■□□□□ 0.3
VRK3-201ENST00000316763 TTC14Q96N46 770 aa16.96■□□□□ 0.3
VRK3-201ENST00000316763 SF3B3Q15393 1217 aaKnown RBP16.95■□□□□ 0.3
VRK3-201ENST00000316763 FOXD4L5Q5VV16 416 aaPredicted RBP16.95■□□□□ 0.3
VRK3-201ENST00000316763 FOXD4L4Q8WXT5 416 aaPredicted RBP16.95■□□□□ 0.3
VRK3-201ENST00000316763 TM6SF1Q9BZW5 370 aa16.95■□□□□ 0.3
VRK3-201ENST00000316763 DBNLQ9UJU6 430 aaKnown RBP16.95■□□□□ 0.3
VRK3-201ENST00000316763 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.95■□□□□ 0.3
VRK3-201ENST00000316763 LRP5O75197 1615 aa16.95■□□□□ 0.3
VRK3-201ENST00000316763 LDHAL6AQ6ZMR3 332 aa16.94■□□□□ 0.3
VRK3-201ENST00000316763 RASEFQ8IZ41 740 aa16.94■□□□□ 0.3
VRK3-201ENST00000316763 TRIM44Q96DX7 344 aaPredicted RBP16.94■□□□□ 0.3
VRK3-201ENST00000316763 ABCC12Q96J65 1359 aa16.94■□□□□ 0.3
VRK3-201ENST00000316763 ZKSCAN1P17029 563 aaPredicted RBP16.94■□□□□ 0.3
VRK3-201ENST00000316763 CASTP20810 708 aaKnown RBP16.94■□□□□ 0.3
VRK3-201ENST00000316763 NASPP49321 788 aaPredicted RBP16.94■□□□□ 0.3
VRK3-201ENST00000316763 AK2P54819 239 aa16.94■□□□□ 0.3
VRK3-201ENST00000316763 KCNB2Q92953 911 aa16.94■□□□□ 0.3
VRK3-201ENST00000316763 SGIP1Q9BQI5 828 aa16.94■□□□□ 0.3
VRK3-201ENST00000316763 CEP126Q9P2H0 1117 aa16.94■□□□□ 0.3
VRK3-201ENST00000316763 GPT2Q8TD30 523 aa16.93■□□□□ 0.3
VRK3-201ENST00000316763 ZSCAN31Q96LW9 406 aaPredicted RBP16.93■□□□□ 0.3
VRK3-201ENST00000316763 CCDC171Q6TFL3 1326 aa16.93■□□□□ 0.3
VRK3-201ENST00000316763 ZNF609O15014 1411 aa16.93■□□□□ 0.3
VRK3-201ENST00000316763 RIC1Q4ADV7 1423 aa16.93■□□□□ 0.3
VRK3-201ENST00000316763 POLD1P28340 1107 aa16.92■□□□□ 0.3
VRK3-201ENST00000316763 PTGER2P43116 358 aa16.92■□□□□ 0.3
VRK3-201ENST00000316763 KCNJ4P48050 445 aa16.92■□□□□ 0.3
VRK3-201ENST00000316763 ST5P78524 1137 aa16.92■□□□□ 0.3
VRK3-201ENST00000316763 PTH1RQ03431 593 aa16.92■□□□□ 0.3
VRK3-201ENST00000316763 CCDC173Q0VFZ6 552 aa16.92■□□□□ 0.3
VRK3-201ENST00000316763 VPS53Q5VIR6 699 aa16.92■□□□□ 0.3
VRK3-201ENST00000316763 PRPF40BQ6NWY9 871 aaKnown RBP16.92■□□□□ 0.3
VRK3-201ENST00000316763 C3orf67Q6ZVT6 689 aa16.92■□□□□ 0.3
VRK3-201ENST00000316763 SEC31BQ9NQW1 1179 aa16.92■□□□□ 0.3
VRK3-201ENST00000316763 CYP46A1Q9Y6A2 500 aa16.92■□□□□ 0.3
VRK3-201ENST00000316763 ANKRD31Q8N7Z5 1873 aa16.92■□□□□ 0.3
VRK3-201ENST00000316763 VGLL2Q8N8G2 317 aa16.92■□□□□ 0.3
VRK3-201ENST00000316763 JAKMIP1Q96N16 626 aaKnown RBP16.92■□□□□ 0.3
VRK3-201ENST00000316763 FSD1Q9BTV5 496 aa16.92■□□□□ 0.3
VRK3-201ENST00000316763 RRAGDQ9NQL2 400 aaPredicted RBP16.92■□□□□ 0.3
VRK3-201ENST00000316763 PDRG1Q9NUG6 133 aa16.92■□□□□ 0.3
VRK3-201ENST00000316763 AKAP2Q9Y2D5 859 aa16.92■□□□□ 0.3
VRK3-201ENST00000316763 ATP5JP18859 108 aa16.91■□□□□ 0.3
VRK3-201ENST00000316763 RUFY3Q7L099 469 aa16.91■□□□□ 0.3
VRK3-201ENST00000316763 DBNDD2Q9BQY9 259 aa16.91■□□□□ 0.3
VRK3-201ENST00000316763 SPON1Q9HCB6 807 aa16.91■□□□□ 0.3
VRK3-201ENST00000316763 SH2B1Q9NRF2 756 aaPredicted RBP16.91■□□□□ 0.3
VRK3-201ENST00000316763 PSMA5P28066 241 aa16.9■□□□□ 0.3
VRK3-201ENST00000316763 TIMM10P62072 90 aa16.9■□□□□ 0.3
VRK3-201ENST00000316763 NMIQ13287 307 aaPredicted RBP16.9■□□□□ 0.3
VRK3-201ENST00000316763 NECTIN1Q15223 517 aa16.9■□□□□ 0.3
VRK3-201ENST00000316763 RNF20Q5VTR2 975 aa16.9■□□□□ 0.3
VRK3-201ENST00000316763 SYAP1Q96A49 352 aaPredicted RBP16.9■□□□□ 0.3
VRK3-201ENST00000316763 BOLA2Q9H3K6 86 aa16.9■□□□□ 0.3
VRK3-201ENST00000316763 ZSWIM6Q9HCJ5 1215 aa16.9■□□□□ 0.3
VRK3-201ENST00000316763 SNRKQ9NRH2 765 aa16.9■□□□□ 0.3
VRK3-201ENST00000316763 CNNM1Q9NRU3 951 aa16.9■□□□□ 0.3
VRK3-201ENST00000316763 SMC3Q9UQE7 1217 aa16.9■□□□□ 0.3
VRK3-201ENST00000316763 TNRC6CQ9HCJ0 1690 aaKnown RBP16.9■□□□□ 0.3
VRK3-201ENST00000316763 A0A1B0GUL7 405 aa16.9■□□□□ 0.3
VRK3-201ENST00000316763 METTL24Q5JXM2 366 aa16.9■□□□□ 0.3
VRK3-201ENST00000316763 MAP4K1Q92918 833 aa16.9■□□□□ 0.3
VRK3-201ENST00000316763 NLRP3Q96P20 1036 aa16.9■□□□□ 0.3
VRK3-201ENST00000316763 RBM8AQ9Y5S9 174 aaKnown RBP16.9■□□□□ 0.3
VRK3-201ENST00000316763 MROH5Q6ZUA9 1318 aa16.9■□□□□ 0.3
VRK3-201ENST00000316763 CDC5LQ99459 802 aaKnown RBP16.89■□□□□ 0.29
VRK3-201ENST00000316763 BRIP1Q9BX63 1249 aa16.89■□□□□ 0.29
VRK3-201ENST00000316763 ATP6V1DQ9Y5K8 247 aa16.89■□□□□ 0.29
VRK3-201ENST00000316763 CREB3L3Q68CJ9 461 aa16.88■□□□□ 0.29
VRK3-201ENST00000316763 FAM227BQ96M60 508 aa16.88■□□□□ 0.29
VRK3-201ENST00000316763 NEUROD6Q96NK8 337 aa16.88■□□□□ 0.29
VRK3-201ENST00000316763 PPP1R9BQ96SB3 815 aa16.88■□□□□ 0.29
VRK3-201ENST00000316763 MPHOSPH8Q99549 860 aa16.88■□□□□ 0.29
VRK3-201ENST00000316763 PDE8BO95263 885 aa16.88■□□□□ 0.29
VRK3-201ENST00000316763 IGHMBP2P38935 993 aaKnown RBP16.88■□□□□ 0.29
VRK3-201ENST00000316763 LRSAM1Q6UWE0 723 aa16.88■□□□□ 0.29
VRK3-201ENST00000316763 RBM27Q9P2N5 1060 aaKnown RBP16.88■□□□□ 0.29
VRK3-201ENST00000316763 ZSCAN22P10073 491 aaPredicted RBP16.87■□□□□ 0.29
VRK3-201ENST00000316763 TMEM63CQ9P1W3 806 aa16.87■□□□□ 0.29
VRK3-201ENST00000316763 RPAP1Q9BWH6 1393 aaPredicted RBP16.87■□□□□ 0.29
VRK3-201ENST00000316763 KLRG2A4D1S0 409 aaPredicted RBP16.86■□□□□ 0.29
VRK3-201ENST00000316763 STX6O43752 255 aa16.86■□□□□ 0.29
VRK3-201ENST00000316763 PDIA4P13667 645 aaKnown RBP16.86■□□□□ 0.29
VRK3-201ENST00000316763 CLCN1P35523 988 aa16.86■□□□□ 0.29
VRK3-201ENST00000316763 ATP2B3Q16720 1220 aa16.86■□□□□ 0.29
VRK3-201ENST00000316763 CHAMP1Q96JM3 812 aa16.86■□□□□ 0.29
VRK3-201ENST00000316763 HMG20BQ9P0W2 317 aa16.86■□□□□ 0.29
VRK3-201ENST00000316763 TAF1P21675 1872 aa16.86■□□□□ 0.29
VRK3-201ENST00000316763 KIF13BQ9NQT8 1826 aa16.86■□□□□ 0.29
VRK3-201ENST00000316763 COL4A1P02462 1669 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms