RNA–Protein interactions for RNA: ENST00000310032.12

TSPAN17-202, Transcript of tetraspanin 17, humanhuman

TSL 5 BASIC

Gene TSPAN17, Length 2,550 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-202ENST00000310032 KMT5BQ4FZB7 885 aa23.33■■□□□ 1.33
TSPAN17-202ENST00000310032 SKILP12757 684 aa23.33■■□□□ 1.32
TSPAN17-202ENST00000310032 GABPB1Q06547 395 aaPredicted RBP23.33■■□□□ 1.32
TSPAN17-202ENST00000310032 TFCP2Q12800 502 aa23.33■■□□□ 1.32
TSPAN17-202ENST00000310032 PTPN14Q15678 1187 aa23.33■■□□□ 1.32
TSPAN17-202ENST00000310032 IL2RBP14784 551 aa23.32■■□□□ 1.32
TSPAN17-202ENST00000310032 RBM6P78332 1123 aaKnown RBP23.32■■□□□ 1.32
TSPAN17-202ENST00000310032 FILIP1Q7Z7B0 1213 aa23.32■■□□□ 1.32
TSPAN17-202ENST00000310032 H3BQV1 296 aa23.32■■□□□ 1.32
TSPAN17-202ENST00000310032 IFFO2Q5TF58 517 aa23.32■■□□□ 1.32
TSPAN17-202ENST00000310032 SARM1Q6SZW1 724 aa23.32■■□□□ 1.32
TSPAN17-202ENST00000310032 GTF3C6Q969F1 213 aa23.32■■□□□ 1.32
TSPAN17-202ENST00000310032 FTOQ9C0B1 505 aaKnown RBP eCLIP23.32■■□□□ 1.324e-8■■■■■ 31.1
TSPAN17-202ENST00000310032 MED23Q9ULK4 1368 aa23.31■■□□□ 1.32
TSPAN17-202ENST00000310032 EVA1CP58658 441 aa23.31■■□□□ 1.32
TSPAN17-202ENST00000310032 NYAP1Q6ZVC0 841 aa23.31■■□□□ 1.32
TSPAN17-202ENST00000310032 MRFAP1L1Q96HT8 127 aa23.31■■□□□ 1.32
TSPAN17-202ENST00000310032 FOSBP53539 338 aa23.31■■□□□ 1.32
TSPAN17-202ENST00000310032 LMBR1LQ6UX01 489 aa23.31■■□□□ 1.32
TSPAN17-202ENST00000310032 DBNLQ9UJU6 430 aaKnown RBP23.31■■□□□ 1.32
TSPAN17-202ENST00000310032 CASP7P55210 303 aa23.3■■□□□ 1.32
TSPAN17-202ENST00000310032 CCDC69A6NI79 296 aa23.3■■□□□ 1.32
TSPAN17-202ENST00000310032 CCZ1BP86790 482 aa23.3■■□□□ 1.32
TSPAN17-202ENST00000310032 CCZ1P86791 482 aaPredicted RBP23.3■■□□□ 1.32
TSPAN17-202ENST00000310032 TAF5LO75529 589 aa23.29■■□□□ 1.32
TSPAN17-202ENST00000310032 CAVIN2O95810 425 aa23.29■■□□□ 1.32
TSPAN17-202ENST00000310032 ZNF397Q8NF99 534 aaPredicted RBP23.29■■□□□ 1.32
TSPAN17-202ENST00000310032 PLBD2Q8NHP8 589 aa23.29■■□□□ 1.32
TSPAN17-202ENST00000310032 GOLPH3LQ9H4A5 285 aa23.29■■□□□ 1.32
TSPAN17-202ENST00000310032 Q6ZUG5 572 aa23.29■■□□□ 1.32
TSPAN17-202ENST00000310032 CCAR1Q8IX12 1150 aaKnown RBP23.29■■□□□ 1.32
TSPAN17-202ENST00000310032 HSP90B1P14625 803 aaKnown RBP23.28■■□□□ 1.32
TSPAN17-202ENST00000310032 STX1AQ16623 288 aa23.28■■□□□ 1.32
TSPAN17-202ENST00000310032 SLFNL1Q499Z3 407 aa23.28■■□□□ 1.32
TSPAN17-202ENST00000310032 LRRC2Q9BYS8 371 aa23.28■■□□□ 1.32
TSPAN17-202ENST00000310032 CFAP45Q9UL16 551 aa23.28■■□□□ 1.32
TSPAN17-202ENST00000310032 BECN2A8MW95 431 aa23.28■■□□□ 1.32
TSPAN17-202ENST00000310032 ELF2Q15723 593 aa23.28■■□□□ 1.32
TSPAN17-202ENST00000310032 TSGA10IPQ3SY00 556 aa23.28■■□□□ 1.32
TSPAN17-202ENST00000310032 DHX40Q8IX18 779 aaKnown RBP23.28■■□□□ 1.32
TSPAN17-202ENST00000310032 ERCC4Q92889 916 aaPredicted RBP23.28■■□□□ 1.32
TSPAN17-202ENST00000310032 HMG20BQ9P0W2 317 aa23.28■■□□□ 1.32
TSPAN17-202ENST00000310032 NEMFO60524 1076 aa23.27■■□□□ 1.32
TSPAN17-202ENST00000310032 ADD1P35611 737 aaKnown RBP23.27■■□□□ 1.32
TSPAN17-202ENST00000310032 FBXO38Q6PIJ6 1188 aa23.27■■□□□ 1.32
TSPAN17-202ENST00000310032 FBXW7Q969H0 707 aa23.27■■□□□ 1.32
TSPAN17-202ENST00000310032 ZNF594Q96JF6 807 aaPredicted RBP23.27■■□□□ 1.32
TSPAN17-202ENST00000310032 NEK1Q96PY6 1258 aa23.27■■□□□ 1.32
TSPAN17-202ENST00000310032 DBNDD2Q9BQY9 259 aa23.27■■□□□ 1.32
TSPAN17-202ENST00000310032 CARD10Q9BWT7 1032 aa23.27■■□□□ 1.32
TSPAN17-202ENST00000310032 ASAP1Q9ULH1 1129 aa23.27■■□□□ 1.32
TSPAN17-202ENST00000310032 COL15A1P39059 1388 aa23.27■■□□□ 1.32
TSPAN17-202ENST00000310032 KRT222Q8N1A0 295 aa23.27■■□□□ 1.32
TSPAN17-202ENST00000310032 CCDC85AQ96PX6 553 aaPredicted RBP23.27■■□□□ 1.32
TSPAN17-202ENST00000310032 HDAC5Q9UQL6 1122 aa23.27■■□□□ 1.32
TSPAN17-202ENST00000310032 TERF2Q15554 542 aa23.26■■□□□ 1.31
TSPAN17-202ENST00000310032 ZSCAN16Q9H4T2 348 aaPredicted RBP23.26■■□□□ 1.31
TSPAN17-202ENST00000310032 NPHP1O15259 732 aa23.26■■□□□ 1.31
TSPAN17-202ENST00000310032 CCAR2Q8N163 923 aaKnown RBP23.26■■□□□ 1.31
TSPAN17-202ENST00000310032 COPRSQ9NQ92 184 aa23.26■■□□□ 1.31
TSPAN17-202ENST00000310032 BTG4Q9NY30 223 aa23.26■■□□□ 1.31
TSPAN17-202ENST00000310032 ARFGEF2Q9Y6D5 1785 aa23.25■■□□□ 1.31
TSPAN17-202ENST00000310032 ABCC6O95255 1503 aa23.25■■□□□ 1.31
TSPAN17-202ENST00000310032 FOXO4P98177 505 aa23.25■■□□□ 1.31
TSPAN17-202ENST00000310032 SCRN1Q12765 414 aa23.25■■□□□ 1.31
TSPAN17-202ENST00000310032 SNW1Q13573 536 aaKnown RBP23.25■■□□□ 1.31
TSPAN17-202ENST00000310032 RABL6Q3YEC7 729 aaPredicted RBP23.25■■□□□ 1.31
TSPAN17-202ENST00000310032 TNNI3KQ59H18 835 aa23.25■■□□□ 1.31
TSPAN17-202ENST00000310032 FPGT-TNNI3KV9GXZ4 949 aa23.25■■□□□ 1.31
TSPAN17-202ENST00000310032 JCADQ9P266 1359 aa23.25■■□□□ 1.31
TSPAN17-202ENST00000310032 CCDC129Q6ZRS4 1044 aa23.25■■□□□ 1.31
TSPAN17-202ENST00000310032 KCPQ6ZWJ8 1503 aa23.24■■□□□ 1.31
TSPAN17-202ENST00000310032 AFDNP55196 1824 aaKnown RBP23.24■■□□□ 1.31
TSPAN17-202ENST00000310032 DNAJC2Q99543 621 aaKnown RBP23.24■■□□□ 1.31
TSPAN17-202ENST00000310032 USPL1Q5W0Q7 1092 aa23.24■■□□□ 1.31
TSPAN17-202ENST00000310032 ERO1AQ96HE7 468 aa23.24■■□□□ 1.31
TSPAN17-202ENST00000310032 SEC62Q99442 399 aaKnown RBP23.24■■□□□ 1.31
TSPAN17-202ENST00000310032 ERVV-2B6SEH9 535 aa23.23■■□□□ 1.31
TSPAN17-202ENST00000310032 PPFIA3O75145 1194 aa23.23■■□□□ 1.31
TSPAN17-202ENST00000310032 AOPEPQ8N6M6 819 aa23.23■■□□□ 1.31
TSPAN17-202ENST00000310032 RCOR1Q9UKL0 485 aa23.23■■□□□ 1.31
TSPAN17-202ENST00000310032 CTAGE5O15320 804 aa23.23■■□□□ 1.31
TSPAN17-202ENST00000310032 ST7Q9NRC1 585 aa23.23■■□□□ 1.31
TSPAN17-202ENST00000310032 KRT32Q14532 448 aa23.22■■□□□ 1.31
TSPAN17-202ENST00000310032 SYTL4Q96C24 671 aaPredicted RBP23.22■■□□□ 1.31
TSPAN17-202ENST00000310032 USP28Q96RU2 1077 aa23.22■■□□□ 1.31
TSPAN17-202ENST00000310032 FAM53CQ9NYF3 392 aa23.22■■□□□ 1.31
TSPAN17-202ENST00000310032 NKX1-1Q15270 411 aaPredicted RBP23.22■■□□□ 1.31
TSPAN17-202ENST00000310032 LRRC24Q50LG9 513 aa23.22■■□□□ 1.31
TSPAN17-202ENST00000310032 DNAJC10Q8IXB1 793 aa23.22■■□□□ 1.31
TSPAN17-202ENST00000310032 SYNE4Q8N205 404 aa23.22■■□□□ 1.31
TSPAN17-202ENST00000310032 KAT6BQ8WYB5 2073 aa23.21■■□□□ 1.31
TSPAN17-202ENST00000310032 SLU7O95391 586 aaKnown RBP23.21■■□□□ 1.31
TSPAN17-202ENST00000310032 DDX46Q7L014 1031 aaKnown RBP23.21■■□□□ 1.31
TSPAN17-202ENST00000310032 PIGBQ92521 554 aa23.21■■□□□ 1.31
TSPAN17-202ENST00000310032 CYP21A2P08686 494 aa23.21■■□□□ 1.31
TSPAN17-202ENST00000310032 TIMM10P62072 90 aa23.21■■□□□ 1.31
TSPAN17-202ENST00000310032 TAF3Q5VWG9 929 aa23.21■■□□□ 1.31
TSPAN17-202ENST00000310032 CCDC73Q6ZRK6 1079 aa23.21■■□□□ 1.31
TSPAN17-202ENST00000310032 PUS3Q9BZE2 481 aaKnown RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms