RNA–Protein interactions for RNA: ENST00000304060.9

ZNF440-201, Transcript of zinc finger protein 440, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF440, Length 4,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-201ENST00000304060 SYMPKQ92797 1274 aaKnown RBP7.42□□□□□ -1.22
ZNF440-201ENST00000304060 LBHD1Q9BQE6 289 aaPredicted RBP7.42□□□□□ -1.22
ZNF440-201ENST00000304060 PTPN22Q9Y2R2 807 aa7.42□□□□□ -1.22
ZNF440-201ENST00000304060 MAST3O60307 1309 aa7.42□□□□□ -1.22
ZNF440-201ENST00000304060 STRIP1Q5VSL9 837 aa7.41□□□□□ -1.22
ZNF440-201ENST00000304060 CCDC88AQ3V6T2 1871 aa7.41□□□□□ -1.22
ZNF440-201ENST00000304060 CASP8AP2Q9UKL3 1982 aa7.41□□□□□ -1.22
ZNF440-201ENST00000304060 SLC4A2P04920 1241 aa7.41□□□□□ -1.22
ZNF440-201ENST00000304060 PABPC4Q13310 644 aaKnown RBP eCLIP7.41□□□□□ -1.22
ZNF440-201ENST00000304060 OTOP1Q7RTM1 612 aa7.41□□□□□ -1.22
ZNF440-201ENST00000304060 BRCA1P38398 1863 aaKnown RBP7.41□□□□□ -1.22
ZNF440-201ENST00000304060 TBC1D16Q8TBP0 767 aa7.41□□□□□ -1.22
ZNF440-201ENST00000304060 HDAC5Q9UQL6 1122 aa7.41□□□□□ -1.22
ZNF440-201ENST00000304060 MYH14Q7Z406 1995 aaKnown RBP7.41□□□□□ -1.22
ZNF440-201ENST00000304060 ZNF280AP59817 542 aaPredicted RBP7.41□□□□□ -1.22
ZNF440-201ENST00000304060 NBR1Q14596 966 aa7.41□□□□□ -1.22
ZNF440-201ENST00000304060 CFHR5Q9BXR6 569 aa7.41□□□□□ -1.22
ZNF440-201ENST00000304060 ZCCHC17Q9NP64 241 aaKnown RBP7.41□□□□□ -1.22
ZNF440-201ENST00000304060 CHMP3Q9Y3E7 222 aa7.41□□□□□ -1.22
ZNF440-201ENST00000304060 FER1L6Q2WGJ9 1857 aa7.4□□□□□ -1.22
ZNF440-201ENST00000304060 FARP2O94887 1054 aaPredicted RBP7.4□□□□□ -1.22
ZNF440-201ENST00000304060 MNX1P50219 401 aaPredicted RBP7.4□□□□□ -1.22
ZNF440-201ENST00000304060 FCGRTP55899 365 aa7.4□□□□□ -1.22
ZNF440-201ENST00000304060 EIF4A1P60842 406 aaKnown RBP7.4□□□□□ -1.22
ZNF440-201ENST00000304060 FMR1Q06787 632 aaKnown RBP eCLIP7.4□□□□□ -1.22
ZNF440-201ENST00000304060 TTLL5Q6EMB2 1281 aa7.4□□□□□ -1.22
ZNF440-201ENST00000304060 ARMC5Q96C12 935 aa7.4□□□□□ -1.22
ZNF440-201ENST00000304060 ABCC12Q96J65 1359 aa7.4□□□□□ -1.22
ZNF440-201ENST00000304060 NBPF26B4DH59 902 aa7.4□□□□□ -1.22
ZNF440-201ENST00000304060 RIPK4P57078 832 aa7.4□□□□□ -1.22
ZNF440-201ENST00000304060 NBPF10Q6P3W6 841 aaKnown RBP7.4□□□□□ -1.22
ZNF440-201ENST00000304060 IFNL1Q8IU54 200 aa7.4□□□□□ -1.22
ZNF440-201ENST00000304060 CCDC191Q8NCU4 936 aa7.4□□□□□ -1.22
ZNF440-201ENST00000304060 CD99L2Q8TCZ2 262 aa7.4□□□□□ -1.22
ZNF440-201ENST00000304060 WNK4Q96J92 1243 aa7.4□□□□□ -1.22
ZNF440-201ENST00000304060 CEMIPQ8WUJ3 1361 aa7.4□□□□□ -1.22
ZNF440-201ENST00000304060 TRPM7Q96QT4 1865 aa7.4□□□□□ -1.22
ZNF440-201ENST00000304060 SLX4Q8IY92 1834 aa7.4□□□□□ -1.23
ZNF440-201ENST00000304060 CCL15-CCL14A0A0B4J2E2 113 aa7.4□□□□□ -1.23
ZNF440-201ENST00000304060 KCNQ3O43525 872 aa7.4□□□□□ -1.23
ZNF440-201ENST00000304060 TFRCP02786 760 aaKnown RBP7.4□□□□□ -1.23
ZNF440-201ENST00000304060 DEKP35659 375 aaKnown RBP7.4□□□□□ -1.23
ZNF440-201ENST00000304060 SNAPC2Q13487 334 aa7.4□□□□□ -1.23
ZNF440-201ENST00000304060 CCL15Q16663 113 aa7.4□□□□□ -1.23
ZNF440-201ENST00000304060 COA7Q96BR5 231 aa7.4□□□□□ -1.23
ZNF440-201ENST00000304060 CCDC30Q5VVM6 783 aa7.39□□□□□ -1.23
ZNF440-201ENST00000304060 MIER1Q8N108 512 aa7.39□□□□□ -1.23
ZNF440-201ENST00000304060 RSPH6AQ9H0K4 717 aa7.39□□□□□ -1.23
ZNF440-201ENST00000304060 KCNH4Q9UQ05 1017 aa7.39□□□□□ -1.23
ZNF440-201ENST00000304060 KIAA1551Q9HCM1 1747 aa7.39□□□□□ -1.23
ZNF440-201ENST00000304060 GPSM2P81274 684 aa7.39□□□□□ -1.23
ZNF440-201ENST00000304060 CHRDL2Q6WN34 429 aa7.39□□□□□ -1.23
ZNF440-201ENST00000304060 DLEC1Q9Y238 1755 aa7.39□□□□□ -1.23
ZNF440-201ENST00000304060 PARK7Q99497 189 aaKnown RBP7.39□□□□□ -1.23
ZNF440-201ENST00000304060 ANKRD18BA2A2Z9 1011 aa7.38□□□□□ -1.23
ZNF440-201ENST00000304060 AFDNP55196 1824 aaKnown RBP7.38□□□□□ -1.23
ZNF440-201ENST00000304060 COL1A1P02452 1464 aaPredicted RBP7.38□□□□□ -1.23
ZNF440-201ENST00000304060 HIRAP54198 1017 aaPredicted RBP7.38□□□□□ -1.23
ZNF440-201ENST00000304060 MAP3K9P80192 1104 aa7.38□□□□□ -1.23
ZNF440-201ENST00000304060 SLAIN1Q8ND83 568 aa7.38□□□□□ -1.23
ZNF440-201ENST00000304060 RNF208Q9H0X6 261 aa7.38□□□□□ -1.23
ZNF440-201ENST00000304060 TJP1Q07157 1748 aa7.38□□□□□ -1.23
ZNF440-201ENST00000304060 NRXN2Q9P2S2 1712 aa7.38□□□□□ -1.23
ZNF440-201ENST00000304060 GNAI1P63096 354 aa7.38□□□□□ -1.23
ZNF440-201ENST00000304060 NECAB2Q7Z6G3 386 aa7.38□□□□□ -1.23
ZNF440-201ENST00000304060 SLF2Q8IX21 1173 aa7.38□□□□□ -1.23
ZNF440-201ENST00000304060 ZBTB38Q8NAP3 1195 aaPredicted RBP7.38□□□□□ -1.23
ZNF440-201ENST00000304060 TBC1D22AQ8WUA7 517 aa7.38□□□□□ -1.23
ZNF440-201ENST00000304060 TRIM34Q9BYJ4 488 aa7.38□□□□□ -1.23
ZNF440-201ENST00000304060 TSPYL2Q9H2G4 693 aaPredicted RBP7.38□□□□□ -1.23
ZNF440-201ENST00000304060 PNMA3Q9UL41 463 aa7.38□□□□□ -1.23
ZNF440-201ENST00000304060 SCN11AQ9UI33 1791 aa7.38□□□□□ -1.23
ZNF440-201ENST00000304060 FAM155AB1AL88 458 aaPredicted RBP7.38□□□□□ -1.23
ZNF440-201ENST00000304060 RTL5Q5HYW3 569 aaPredicted RBP7.38□□□□□ -1.23
ZNF440-201ENST00000304060 KIAA0825Q8IV33 1275 aa7.38□□□□□ -1.23
ZNF440-201ENST00000304060 NOL10Q9BSC4 688 aaKnown RBP7.38□□□□□ -1.23
ZNF440-201ENST00000304060 AKAP11Q9UKA4 1901 aa7.37□□□□□ -1.23
ZNF440-201ENST00000304060 MYCP01106 439 aaPredicted RBP7.37□□□□□ -1.23
ZNF440-201ENST00000304060 PTPN12Q05209 780 aaKnown RBP7.37□□□□□ -1.23
ZNF440-201ENST00000304060 DCTN1Q14203 1278 aa7.37□□□□□ -1.23
ZNF440-201ENST00000304060 PICK1Q9NRD5 415 aa7.37□□□□□ -1.23
ZNF440-201ENST00000304060 GNL3LQ9NVN8 582 aaKnown RBP7.37□□□□□ -1.23
ZNF440-201ENST00000304060 MIS18AQ9NYP9 233 aa7.37□□□□□ -1.23
ZNF440-201ENST00000304060 GLRX3O76003 335 aaKnown RBP7.37□□□□□ -1.23
ZNF440-201ENST00000304060 PCCAP05165 728 aaPredicted RBP7.37□□□□□ -1.23
ZNF440-201ENST00000304060 TRIM28Q13263 835 aaKnown RBP7.37□□□□□ -1.23
ZNF440-201ENST00000304060 CCDC174Q6PII3 467 aa7.37□□□□□ -1.23
ZNF440-201ENST00000304060 FAM89AQ96GI7 184 aa7.37□□□□□ -1.23
ZNF440-201ENST00000304060 DEFB129Q9H1M3 183 aa7.37□□□□□ -1.23
ZNF440-201ENST00000304060 CNNM1Q9NRU3 951 aa7.37□□□□□ -1.23
ZNF440-201ENST00000304060 SCN7AQ01118 1682 aa7.37□□□□□ -1.23
ZNF440-201ENST00000304060 GTF2IP78347 998 aa7.37□□□□□ -1.23
ZNF440-201ENST00000304060 CAVIN4Q5BKX8 364 aa7.37□□□□□ -1.23
ZNF440-201ENST00000304060 SMCR8Q8TEV9 937 aaPredicted RBP7.37□□□□□ -1.23
ZNF440-201ENST00000304060 GRK4P32298 578 aa7.36□□□□□ -1.23
ZNF440-201ENST00000304060 MAPK8IP2Q13387 824 aaPredicted RBP7.36□□□□□ -1.23
ZNF440-201ENST00000304060 FASTKD5Q7L8L6 764 aaKnown RBP7.36□□□□□ -1.23
ZNF440-201ENST00000304060 PIAS4Q8N2W9 510 aaPredicted RBP7.36□□□□□ -1.23
ZNF440-201ENST00000304060 MYD88Q99836 296 aa7.36□□□□□ -1.23
ZNF440-201ENST00000304060 THUMPD2Q9BTF0 503 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms