RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 FKBP4Q02790 459 aaKnown RBP eCLIP16.05■□□□□ 0.16
BCCIP-202ENST00000299130 AGXT2Q9BYV1 514 aa16.05■□□□□ 0.16
BCCIP-202ENST00000299130 ZSCAN16Q9H4T2 348 aaPredicted RBP16.05■□□□□ 0.16
BCCIP-202ENST00000299130 DCCP43146 1447 aa16.04■□□□□ 0.16
BCCIP-202ENST00000299130 PLEKHG2Q9H7P9 1386 aa16.04■□□□□ 0.16
BCCIP-202ENST00000299130 WDR17Q8IZU2 1322 aa16.04■□□□□ 0.16
BCCIP-202ENST00000299130 HMGB1P09429 215 aaKnown RBP16.04■□□□□ 0.16
BCCIP-202ENST00000299130 HSP90AB3PQ58FF7 597 aa16.04■□□□□ 0.16
BCCIP-202ENST00000299130 LLPHQ9BRT6 129 aaKnown RBP16.04■□□□□ 0.16
BCCIP-202ENST00000299130 GOLPH3LQ9H4A5 285 aa16.04■□□□□ 0.16
BCCIP-202ENST00000299130 PRDM11Q9NQV5 511 aa16.04■□□□□ 0.16
BCCIP-202ENST00000299130 NRBP1Q9UHY1 535 aa16.04■□□□□ 0.16
BCCIP-202ENST00000299130 ZNF330Q9Y3S2 320 aaPredicted RBP16.04■□□□□ 0.16
BCCIP-202ENST00000299130 ERVV-2B6SEH9 535 aa16.03■□□□□ 0.16
BCCIP-202ENST00000299130 PDIA3P30101 505 aaKnown RBP16.03■□□□□ 0.16
BCCIP-202ENST00000299130 SCARF1Q14162 830 aa16.03■□□□□ 0.16
BCCIP-202ENST00000299130 MYRIPQ8NFW9 859 aa16.03■□□□□ 0.16
BCCIP-202ENST00000299130 A0A087WWV3 80 aa16.03■□□□□ 0.16
BCCIP-202ENST00000299130 ILDR1Q86SU0 546 aaPredicted RBP16.03■□□□□ 0.16
BCCIP-202ENST00000299130 USP28Q96RU2 1077 aa16.03■□□□□ 0.16
BCCIP-202ENST00000299130 SALL1Q9NSC2 1324 aa16.03■□□□□ 0.16
BCCIP-202ENST00000299130 CIAO1O76071 339 aa16.02■□□□□ 0.16
BCCIP-202ENST00000299130 HAND2P61296 217 aa16.02■□□□□ 0.16
BCCIP-202ENST00000299130 NAA16Q6N069 864 aaPredicted RBP16.02■□□□□ 0.16
BCCIP-202ENST00000299130 CFAP45Q9UL16 551 aa16.02■□□□□ 0.16
BCCIP-202ENST00000299130 MYH15Q9Y2K3 1946 aa16.02■□□□□ 0.16
BCCIP-202ENST00000299130 FAM177BA6PVY3 158 aa16.02■□□□□ 0.15
BCCIP-202ENST00000299130 PI16Q6UXB8 463 aa16.02■□□□□ 0.15
BCCIP-202ENST00000299130 BRINP3Q76B58 766 aa16.02■□□□□ 0.15
BCCIP-202ENST00000299130 SYNE4Q8N205 404 aa16.02■□□□□ 0.15
BCCIP-202ENST00000299130 ISCA1Q9BUE6 129 aa16.02■□□□□ 0.15
BCCIP-202ENST00000299130 RCOR1Q9UKL0 485 aa16.02■□□□□ 0.15
BCCIP-202ENST00000299130 FDPSP14324 419 aaKnown RBP16.01■□□□□ 0.15
BCCIP-202ENST00000299130 ZNF165P49910 485 aa16.01■□□□□ 0.15
BCCIP-202ENST00000299130 NKX1-1Q15270 411 aaPredicted RBP16.01■□□□□ 0.15
BCCIP-202ENST00000299130 CCAR1Q8IX12 1150 aaKnown RBP16.01■□□□□ 0.15
BCCIP-202ENST00000299130 TDRD7Q8NHU6 1098 aaKnown RBP16.01■□□□□ 0.15
BCCIP-202ENST00000299130 FAM89AQ96GI7 184 aa16.01■□□□□ 0.15
BCCIP-202ENST00000299130 XAGE2Q96GT9 111 aa16.01■□□□□ 0.15
BCCIP-202ENST00000299130 CEP126Q9P2H0 1117 aa16.01■□□□□ 0.15
BCCIP-202ENST00000299130 NWD2Q9ULI1 1742 aa16.01■□□□□ 0.15
BCCIP-202ENST00000299130 ZNF75DP51815 510 aa16.01■□□□□ 0.15
BCCIP-202ENST00000299130 LRMPQ12912 555 aa16.01■□□□□ 0.15
BCCIP-202ENST00000299130 OTUD7BQ6GQQ9 843 aa16.01■□□□□ 0.15
BCCIP-202ENST00000299130 C11orf57Q6ZUT1 292 aaPredicted RBP16.01■□□□□ 0.15
BCCIP-202ENST00000299130 CCDC186Q7Z3E2 898 aa16.01■□□□□ 0.15
BCCIP-202ENST00000299130 PAPPAQ13219 1627 aa16.01■□□□□ 0.15
BCCIP-202ENST00000299130 SNW1Q13573 536 aaKnown RBP16■□□□□ 0.15
BCCIP-202ENST00000299130 PLA2G4DQ86XP0 818 aa16■□□□□ 0.15
BCCIP-202ENST00000299130 ARID3AQ99856 593 aa16■□□□□ 0.15
BCCIP-202ENST00000299130 TRIM5Q9C035 493 aa16■□□□□ 0.15
BCCIP-202ENST00000299130 ATG3Q9NT62 314 aa16■□□□□ 0.15
BCCIP-202ENST00000299130 COL5A2P05997 1499 aaPredicted RBP16■□□□□ 0.15
BCCIP-202ENST00000299130 IL2RBP14784 551 aa16■□□□□ 0.15
BCCIP-202ENST00000299130 HMGN5P82970 282 aaKnown RBP16■□□□□ 0.15
BCCIP-202ENST00000299130 TCIRG1Q13488 830 aa16■□□□□ 0.15
BCCIP-202ENST00000299130 CCDC57Q2TAC2 916 aa16■□□□□ 0.15
BCCIP-202ENST00000299130 TTC39AQ5SRH9 613 aa16■□□□□ 0.15
BCCIP-202ENST00000299130 RAB11FIP4Q86YS3 637 aa16■□□□□ 0.15
BCCIP-202ENST00000299130 ERCC4Q92889 916 aaPredicted RBP16■□□□□ 0.15
BCCIP-202ENST00000299130 STRN4Q9NRL3 753 aa16■□□□□ 0.15
BCCIP-202ENST00000299130 GOLGA6L6A8MZA4 724 aa15.99■□□□□ 0.15
BCCIP-202ENST00000299130 ZAP70P43403 619 aa15.99■□□□□ 0.15
BCCIP-202ENST00000299130 WASHC4Q2M389 1173 aa15.99■□□□□ 0.15
BCCIP-202ENST00000299130 ZNF274Q96GC6 653 aaPredicted RBP15.99■□□□□ 0.15
BCCIP-202ENST00000299130 PRIMPOLQ96LW4 560 aa15.99■□□□□ 0.15
BCCIP-202ENST00000299130 PUS7LQ9H0K6 701 aaKnown RBP15.99■□□□□ 0.15
BCCIP-202ENST00000299130 SHANK3Q9BYB0 1731 aa15.99■□□□□ 0.15
BCCIP-202ENST00000299130 CARMIL3Q8ND23 1372 aa15.99■□□□□ 0.15
BCCIP-202ENST00000299130 TNS2Q63HR2 1409 aa15.99■□□□□ 0.15
BCCIP-202ENST00000299130 IQCB1Q15051 598 aa15.99■□□□□ 0.15
BCCIP-202ENST00000299130 GORABQ5T7V8 394 aa15.99■□□□□ 0.15
BCCIP-202ENST00000299130 DRC7Q8IY82 874 aa15.99■□□□□ 0.15
BCCIP-202ENST00000299130 FGAP02671 866 aa15.98■□□□□ 0.15
BCCIP-202ENST00000299130 TPM3P06753 285 aa15.98■□□□□ 0.15
BCCIP-202ENST00000299130 HSPA2P54652 639 aa15.98■□□□□ 0.15
BCCIP-202ENST00000299130 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.98■□□□□ 0.15
BCCIP-202ENST00000299130 GJB4Q9NTQ9 266 aa15.98■□□□□ 0.15
BCCIP-202ENST00000299130 CCDC144BQ3MJ40 725 aa15.97■□□□□ 0.15
BCCIP-202ENST00000299130 CCDC158Q5M9N0 1113 aa15.97■□□□□ 0.15
BCCIP-202ENST00000299130 DNAJC10Q8IXB1 793 aa15.97■□□□□ 0.15
BCCIP-202ENST00000299130 CCDC144CPQ8IYA2 1237 aa15.97■□□□□ 0.15
BCCIP-202ENST00000299130 ZNF710Q8N1W2 664 aa15.97■□□□□ 0.15
BCCIP-202ENST00000299130 ENGASEQ8NFI3 743 aa15.97■□□□□ 0.15
BCCIP-202ENST00000299130 NKX2-3Q8TAU0 364 aa15.97■□□□□ 0.15
BCCIP-202ENST00000299130 ASAP1Q9ULH1 1129 aa15.97■□□□□ 0.15
BCCIP-202ENST00000299130 GLIPR1L2Q4G1C9 344 aa15.97■□□□□ 0.15
BCCIP-202ENST00000299130 VSIG10Q8N0Z9 540 aa15.97■□□□□ 0.15
BCCIP-202ENST00000299130 DENND2AQ9ULE3 1009 aa15.97■□□□□ 0.15
BCCIP-202ENST00000299130 TOGARAM1Q9Y4F4 1720 aa15.97■□□□□ 0.15
BCCIP-202ENST00000299130 SPEF2Q9C093 1822 aa15.96■□□□□ 0.15
BCCIP-202ENST00000299130 ANTXR2P58335 489 aa15.96■□□□□ 0.15
BCCIP-202ENST00000299130 ME1P48163 572 aa15.96■□□□□ 0.15
BCCIP-202ENST00000299130 EVCP57679 992 aa15.96■□□□□ 0.15
BCCIP-202ENST00000299130 ZSCAN25Q6NSZ9 544 aa15.96■□□□□ 0.15
BCCIP-202ENST00000299130 CARD10Q9BWT7 1032 aa15.96■□□□□ 0.15
BCCIP-202ENST00000299130 PCDHA7Q9UN72 937 aa15.96■□□□□ 0.15
BCCIP-202ENST00000299130 HPS5Q9UPZ3 1129 aa15.96■□□□□ 0.15
BCCIP-202ENST00000299130 XIRP1Q702N8 1843 aaKnown RBP15.96■□□□□ 0.14
BCCIP-202ENST00000299130 PRC1O43663 620 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms