RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 CACNA1FO60840 1977 aa26.64■■□□□ 1.85
SMCO4-201ENST00000298966 ZNF609O15014 1411 aa26.63■■□□□ 1.85
SMCO4-201ENST00000298966 PSME4Q14997 1843 aa26.62■■□□□ 1.85
SMCO4-201ENST00000298966 HOXB7P09629 217 aa26.62■■□□□ 1.85
SMCO4-201ENST00000298966 HSP90B1P14625 803 aaKnown RBP26.62■■□□□ 1.85
SMCO4-201ENST00000298966 TRIM28Q13263 835 aaKnown RBP26.62■■□□□ 1.85
SMCO4-201ENST00000298966 PITPNM2Q9BZ72 1349 aa26.62■■□□□ 1.85
SMCO4-201ENST00000298966 HYPKQ9NX55 129 aa26.61■■□□□ 1.85
SMCO4-201ENST00000298966 MYOZ2Q9NPC6 264 aa26.6■■□□□ 1.85
SMCO4-201ENST00000298966 SEC31BQ9NQW1 1179 aa26.6■■□□□ 1.85
SMCO4-201ENST00000298966 USP17L8P0C7I0 530 aa26.59■■□□□ 1.85
SMCO4-201ENST00000298966 TWISTNBQ3B726 338 aaPredicted RBP26.59■■□□□ 1.85
SMCO4-201ENST00000298966 ZNF296Q8WUU4 475 aaPredicted RBP26.59■■□□□ 1.85
SMCO4-201ENST00000298966 VAMP4O75379 141 aa26.58■■□□□ 1.85
SMCO4-201ENST00000298966 TBC1D8O95759 1140 aa26.57■■□□□ 1.84
SMCO4-201ENST00000298966 MS4A1P11836 297 aa26.57■■□□□ 1.84
SMCO4-201ENST00000298966 IRX6P78412 446 aaPredicted RBP26.57■■□□□ 1.84
SMCO4-201ENST00000298966 CCDC152Q4G0S7 254 aa26.57■■□□□ 1.84
SMCO4-201ENST00000298966 MOB2Q70IA6 237 aa26.57■■□□□ 1.84
SMCO4-201ENST00000298966 RIC3Q7Z5B4 369 aa26.57■■□□□ 1.84
SMCO4-201ENST00000298966 ZBTB38Q8NAP3 1195 aaPredicted RBP26.57■■□□□ 1.84
SMCO4-201ENST00000298966 GMLQ99445 158 aa26.57■■□□□ 1.84
SMCO4-201ENST00000298966 KIF16BQ96L93 1317 aa26.57■■□□□ 1.84
SMCO4-201ENST00000298966 UBE2Q2LH0YL09 131 aa26.56■■□□□ 1.84
SMCO4-201ENST00000298966 USP17L3A6NCW0 530 aa26.55■■□□□ 1.84
SMCO4-201ENST00000298966 USP17L4A6NCW7 530 aa26.55■■□□□ 1.84
SMCO4-201ENST00000298966 TTLL12Q14166 644 aaPredicted RBP26.55■■□□□ 1.84
SMCO4-201ENST00000298966 USP17L1Q7RTZ2 530 aa26.55■■□□□ 1.84
SMCO4-201ENST00000298966 XDHP47989 1333 aa26.55■■□□□ 1.84
SMCO4-201ENST00000298966 PDE3AQ14432 1141 aa26.54■■□□□ 1.84
SMCO4-201ENST00000298966 PODNQ7Z5L7 613 aa26.54■■□□□ 1.84
SMCO4-201ENST00000298966 SMC4Q9NTJ3 1288 aa26.54■■□□□ 1.84
SMCO4-201ENST00000298966 NF2P35240 595 aa26.53■■□□□ 1.84
SMCO4-201ENST00000298966 C8orf58Q8NAV2 365 aa26.53■■□□□ 1.84
SMCO4-201ENST00000298966 SCAF8Q9UPN6 1271 aaKnown RBP26.53■■□□□ 1.84
SMCO4-201ENST00000298966 GPR25O00155 361 aa26.52■■□□□ 1.84
SMCO4-201ENST00000298966 IPO8O15397 1037 aaKnown RBP26.52■■□□□ 1.84
SMCO4-201ENST00000298966 PDE8AO60658 829 aa26.52■■□□□ 1.84
SMCO4-201ENST00000298966 BCAR3O75815 825 aa26.52■■□□□ 1.84
SMCO4-201ENST00000298966 ATP2B4P23634 1241 aa26.52■■□□□ 1.84
SMCO4-201ENST00000298966 TM4SF4P48230 202 aa26.52■■□□□ 1.84
SMCO4-201ENST00000298966 NOM1Q5C9Z4 860 aaKnown RBP26.52■■□□□ 1.84
SMCO4-201ENST00000298966 FBXO46Q6PJ61 603 aaPredicted RBP26.52■■□□□ 1.84
SMCO4-201ENST00000298966 ANKRD18AQ8IVF6 992 aa26.52■■□□□ 1.84
SMCO4-201ENST00000298966 PRAMEF18Q5VWM3 479 aa26.51■■□□□ 1.83
SMCO4-201ENST00000298966 SSH1Q8WYL5 1049 aa26.51■■□□□ 1.83
SMCO4-201ENST00000298966 CCDC85AQ96PX6 553 aaPredicted RBP26.51■■□□□ 1.83
SMCO4-201ENST00000298966 PCCAP05165 728 aaPredicted RBP26.5■■□□□ 1.83
SMCO4-201ENST00000298966 SREBF2Q12772 1141 aa26.5■■□□□ 1.83
SMCO4-201ENST00000298966 CCDC191Q8NCU4 936 aa26.5■■□□□ 1.83
SMCO4-201ENST00000298966 MYD88Q99836 296 aa26.5■■□□□ 1.83
SMCO4-201ENST00000298966 PPP4R2Q9NY27 417 aa26.5■■□□□ 1.83
SMCO4-201ENST00000298966 NBPF9Q3BBW0 867 aa26.49■■□□□ 1.83
SMCO4-201ENST00000298966 OGFOD1Q8N543 542 aa26.49■■□□□ 1.83
SMCO4-201ENST00000298966 TSPYL6Q8N831 410 aa26.49■■□□□ 1.83
SMCO4-201ENST00000298966 FKTNO75072 461 aa26.48■■□□□ 1.83
SMCO4-201ENST00000298966 MKRN3Q13064 507 aaKnown RBP26.48■■□□□ 1.83
SMCO4-201ENST00000298966 ZKSCAN2Q63HK3 967 aa26.48■■□□□ 1.83
SMCO4-201ENST00000298966 ARHGAP45Q92619 1136 aa26.48■■□□□ 1.83
SMCO4-201ENST00000298966 GCC1Q96CN9 775 aa26.47■■□□□ 1.83
SMCO4-201ENST00000298966 CWC25Q9NXE8 425 aaPredicted RBP26.47■■□□□ 1.83
SMCO4-201ENST00000298966 JARID2Q92833 1246 aaPredicted RBP26.46■■□□□ 1.83
SMCO4-201ENST00000298966 CDC5LQ99459 802 aaKnown RBP26.46■■□□□ 1.83
SMCO4-201ENST00000298966 PHAXQ9H814 394 aaKnown RBP26.46■■□□□ 1.83
SMCO4-201ENST00000298966 MED23Q9ULK4 1368 aa26.46■■□□□ 1.83
SMCO4-201ENST00000298966 MYO3BQ8WXR4 1341 aa26.45■■□□□ 1.83
SMCO4-201ENST00000298966 ARMC9Q7Z3E5 817 aa26.45■■□□□ 1.82
SMCO4-201ENST00000298966 FBXW7Q969H0 707 aa26.45■■□□□ 1.82
SMCO4-201ENST00000298966 CFHR5Q9BXR6 569 aa26.45■■□□□ 1.82
SMCO4-201ENST00000298966 ELL2O00472 640 aaPredicted RBP26.44■■□□□ 1.82
SMCO4-201ENST00000298966 WNT10BO00744 389 aa26.44■■□□□ 1.82
SMCO4-201ENST00000298966 PLIN1O60240 522 aa26.44■■□□□ 1.82
SMCO4-201ENST00000298966 AAMPQ13685 434 aa26.44■■□□□ 1.82
SMCO4-201ENST00000298966 DACT2Q5SW24 774 aa26.44■■□□□ 1.82
SMCO4-201ENST00000298966 CCDC30Q5VVM6 783 aa26.44■■□□□ 1.82
SMCO4-201ENST00000298966 MRPL50Q8N5N7 158 aaKnown RBP26.44■■□□□ 1.82
SMCO4-201ENST00000298966 PTPN12Q05209 780 aaKnown RBP26.42■■□□□ 1.82
SMCO4-201ENST00000298966 STRIP1Q5VSL9 837 aa26.42■■□□□ 1.82
SMCO4-201ENST00000298966 FRAT1Q92837 279 aaPredicted RBP26.42■■□□□ 1.82
SMCO4-201ENST00000298966 MXD3Q9BW11 206 aa26.42■■□□□ 1.82
SMCO4-201ENST00000298966 STK31Q9BXU1 1019 aa26.42■■□□□ 1.82
SMCO4-201ENST00000298966 ALDH1A1P00352 501 aa26.41■■□□□ 1.82
SMCO4-201ENST00000298966 MMP14P50281 582 aa26.41■■□□□ 1.82
SMCO4-201ENST00000298966 PRKG1Q13976 671 aa26.41■■□□□ 1.82
SMCO4-201ENST00000298966 ATF7IPQ6VMQ6 1270 aa26.41■■□□□ 1.82
SMCO4-201ENST00000298966 APOBEC3FQ8IUX4 373 aaKnown RBP26.41■■□□□ 1.82
SMCO4-201ENST00000298966 SPEF2Q9C093 1822 aa26.41■■□□□ 1.82
SMCO4-201ENST00000298966 ZNF646O15015 1829 aaPredicted RBP26.4■■□□□ 1.82
SMCO4-201ENST00000298966 SASH1O94885 1247 aa26.4■■□□□ 1.82
SMCO4-201ENST00000298966 DDX58O95786 925 aaKnown RBP26.4■■□□□ 1.82
SMCO4-201ENST00000298966 METTL22Q9BUU2 404 aaPredicted RBP26.4■■□□□ 1.82
SMCO4-201ENST00000298966 COA1Q9GZY4 146 aa26.4■■□□□ 1.82
SMCO4-201ENST00000298966 BSDC1Q9NW68 430 aaPredicted RBP26.4■■□□□ 1.82
SMCO4-201ENST00000298966 PTPRCP08575 1304 aa26.39■■□□□ 1.82
SMCO4-201ENST00000298966 MYH3P11055 1940 aa26.39■■□□□ 1.82
SMCO4-201ENST00000298966 WTIPA6NIX2 430 aaPredicted RBP26.39■■□□□ 1.82
SMCO4-201ENST00000298966 CCT4P50991 539 aaKnown RBP26.39■■□□□ 1.82
SMCO4-201ENST00000298966 CTSWP56202 376 aa26.39■■□□□ 1.82
SMCO4-201ENST00000298966 SPRYD7Q5W111 196 aa26.39■■□□□ 1.82
SMCO4-201ENST00000298966 API5Q9BZZ5 524 aaKnown RBP26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms