RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 SYNE4Q8N205 404 aa7.52□□□□□ -1.21
SSX3-201ENST00000298396 DNAAF4Q8WXU2 420 aa7.52□□□□□ -1.21
SSX3-201ENST00000298396 ARXQ96QS3 562 aa7.52□□□□□ -1.21
SSX3-201ENST00000298396 MYD88Q99836 296 aa7.52□□□□□ -1.21
SSX3-201ENST00000298396 METTL22Q9BUU2 404 aaPredicted RBP7.52□□□□□ -1.21
SSX3-201ENST00000298396 GOPCQ9HD26 462 aa7.52□□□□□ -1.21
SSX3-201ENST00000298396 NIP7Q9Y221 180 aaKnown RBP eCLIP7.52□□□□□ -1.21
SSX3-201ENST00000298396 PTPRCP08575 1304 aa7.52□□□□□ -1.21
SSX3-201ENST00000298396 IBTKQ9P2D0 1353 aaPredicted RBP7.51□□□□□ -1.21
SSX3-201ENST00000298396 PLIN1O60240 522 aa7.51□□□□□ -1.21
SSX3-201ENST00000298396 CASP7P55210 303 aa7.51□□□□□ -1.21
SSX3-201ENST00000298396 SUSD4Q5VX71 490 aa7.51□□□□□ -1.21
SSX3-201ENST00000298396 RIC3Q7Z5B4 369 aa7.51□□□□□ -1.21
SSX3-201ENST00000298396 NLGN1Q8N2Q7 840 aa7.51□□□□□ -1.21
SSX3-201ENST00000298396 CCDC24Q8N4L8 307 aa7.51□□□□□ -1.21
SSX3-201ENST00000298396 ANKK1Q8NFD2 765 aa7.51□□□□□ -1.21
SSX3-201ENST00000298396 LRCH3Q96II8 777 aa7.51□□□□□ -1.21
SSX3-201ENST00000298396 CHMP4AQ9BY43 222 aa7.51□□□□□ -1.21
SSX3-201ENST00000298396 LRRC37AA6NMS7 1700 aa7.51□□□□□ -1.21
SSX3-201ENST00000298396 SBF1O95248 1867 aa7.51□□□□□ -1.21
SSX3-201ENST00000298396 RNF123Q5XPI4 1314 aa7.51□□□□□ -1.21
SSX3-201ENST00000298396 KIF16BQ96L93 1317 aa7.51□□□□□ -1.21
SSX3-201ENST00000298396 NEURL1BA8MQ27 555 aa7.5□□□□□ -1.21
SSX3-201ENST00000298396 SERPINB2P05120 415 aa7.5□□□□□ -1.21
SSX3-201ENST00000298396 TRIM28Q13263 835 aaKnown RBP7.5□□□□□ -1.21
SSX3-201ENST00000298396 C20orf194Q5TEA3 1177 aa7.5□□□□□ -1.21
SSX3-201ENST00000298396 PRR5LQ6MZQ0 368 aa7.5□□□□□ -1.21
SSX3-201ENST00000298396 ATF7IPQ6VMQ6 1270 aa7.5□□□□□ -1.21
SSX3-201ENST00000298396 NUTM1Q86Y26 1132 aa7.5□□□□□ -1.21
SSX3-201ENST00000298396 ARHGAP45Q92619 1136 aa7.5□□□□□ -1.21
SSX3-201ENST00000298396 JARID2Q92833 1246 aaPredicted RBP7.5□□□□□ -1.21
SSX3-201ENST00000298396 BEGAINQ9BUH8 593 aa7.5□□□□□ -1.21
SSX3-201ENST00000298396 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.5□□□□□ -1.21
SSX3-201ENST00000298396 ZNF652Q9Y2D9 606 aa7.5□□□□□ -1.21
SSX3-201ENST00000298396 RIC1Q4ADV7 1423 aa7.5□□□□□ -1.21
SSX3-201ENST00000298396 LTBP1Q14766 1721 aa7.49□□□□□ -1.21
SSX3-201ENST00000298396 FER1L6Q2WGJ9 1857 aa7.49□□□□□ -1.21
SSX3-201ENST00000298396 FAM177BA6PVY3 158 aa7.49□□□□□ -1.21
SSX3-201ENST00000298396 DDX11L8A8MPP1 907 aa7.49□□□□□ -1.21
SSX3-201ENST00000298396 DDX58O95786 925 aaKnown RBP7.49□□□□□ -1.21
SSX3-201ENST00000298396 GCGRP47871 477 aa7.49□□□□□ -1.21
SSX3-201ENST00000298396 GCKRQ14397 625 aa7.49□□□□□ -1.21
SSX3-201ENST00000298396 ERFEQ4G0M1 354 aa7.49□□□□□ -1.21
SSX3-201ENST00000298396 THSD4Q6ZMP0 1018 aa7.49□□□□□ -1.21
SSX3-201ENST00000298396 NPM2Q86SE8 214 aaKnown RBP7.49□□□□□ -1.21
SSX3-201ENST00000298396 PANK1Q8TE04 598 aa7.49□□□□□ -1.21
SSX3-201ENST00000298396 FRAT1Q92837 279 aaPredicted RBP7.49□□□□□ -1.21
SSX3-201ENST00000298396 WNT2BQ93097 391 aa7.49□□□□□ -1.21
SSX3-201ENST00000298396 CLUAP1Q96AJ1 413 aa7.49□□□□□ -1.21
SSX3-201ENST00000298396 SETDB2Q96T68 719 aa7.49□□□□□ -1.21
SSX3-201ENST00000298396 SPON1Q9HCB6 807 aa7.49□□□□□ -1.21
SSX3-201ENST00000298396 UTRNP46939 3433 aa7.49□□□□□ -1.21
SSX3-201ENST00000298396 RRP1P56182 461 aaKnown RBP7.48□□□□□ -1.21
SSX3-201ENST00000298396 PARP10Q53GL7 1025 aa7.48□□□□□ -1.21
SSX3-201ENST00000298396 HSP90AB3PQ58FF7 597 aa7.48□□□□□ -1.21
SSX3-201ENST00000298396 SH3D19Q5HYK7 790 aa7.48□□□□□ -1.21
SSX3-201ENST00000298396 ZKSCAN2Q63HK3 967 aa7.48□□□□□ -1.21
SSX3-201ENST00000298396 INTS3Q68E01 1043 aaKnown RBP7.48□□□□□ -1.21
SSX3-201ENST00000298396 SLC4A10Q6U841 1118 aa7.48□□□□□ -1.21
SSX3-201ENST00000298396 SLC51AQ86UW1 340 aa7.48□□□□□ -1.21
SSX3-201ENST00000298396 NBPF5PQ86XG9 351 aaPredicted RBP7.48□□□□□ -1.21
SSX3-201ENST00000298396 TMEM57Q8N5G2 664 aa7.48□□□□□ -1.21
SSX3-201ENST00000298396 CCDC191Q8NCU4 936 aa7.48□□□□□ -1.21
SSX3-201ENST00000298396 LINS1Q8NG48 757 aa7.48□□□□□ -1.21
SSX3-201ENST00000298396 FAM89AQ96GI7 184 aa7.48□□□□□ -1.21
SSX3-201ENST00000298396 KAZALD1Q96I82 304 aa7.48□□□□□ -1.21
SSX3-201ENST00000298396 API5Q9BZZ5 524 aaKnown RBP7.48□□□□□ -1.21
SSX3-201ENST00000298396 CWC25Q9NXE8 425 aaPredicted RBP7.48□□□□□ -1.21
SSX3-201ENST00000298396 PARP3Q9Y6F1 533 aa7.48□□□□□ -1.21
SSX3-201ENST00000298396 DICER1Q9UPY3 1922 aaKnown RBP7.48□□□□□ -1.21
SSX3-201ENST00000298396 UTYO14607 1347 aa7.48□□□□□ -1.21
SSX3-201ENST00000298396 KLRG2A4D1S0 409 aaPredicted RBP7.47□□□□□ -1.21
SSX3-201ENST00000298396 GOLGA8CPA6NN73 597 aa7.47□□□□□ -1.21
SSX3-201ENST00000298396 H7C1W4 665 aa7.47□□□□□ -1.21
SSX3-201ENST00000298396 ALDH1L1O75891 902 aa7.47□□□□□ -1.21
SSX3-201ENST00000298396 PCCAP05165 728 aaPredicted RBP7.47□□□□□ -1.21
SSX3-201ENST00000298396 NBPF7P0C2Y1 421 aaPredicted RBP7.47□□□□□ -1.21
SSX3-201ENST00000298396 HCLS1P14317 486 aaPredicted RBP7.47□□□□□ -1.21
SSX3-201ENST00000298396 GJA5P36382 358 aa7.47□□□□□ -1.21
SSX3-201ENST00000298396 BCAMP50895 628 aa7.47□□□□□ -1.21
SSX3-201ENST00000298396 DIXDC1Q155Q3 683 aa7.47□□□□□ -1.21
SSX3-201ENST00000298396 RTL5Q5HYW3 569 aaPredicted RBP7.47□□□□□ -1.21
SSX3-201ENST00000298396 EPHA10Q5JZY3 1008 aa7.47□□□□□ -1.21
SSX3-201ENST00000298396 CNBD1Q8NA66 436 aa7.47□□□□□ -1.21
SSX3-201ENST00000298396 NLGN2Q8NFZ4 835 aa7.47□□□□□ -1.21
SSX3-201ENST00000298396 UTP14AQ9BVJ6 771 aaKnown RBP7.47□□□□□ -1.21
SSX3-201ENST00000298396 SRCIN1Q9C0H9 1055 aa7.47□□□□□ -1.21
SSX3-201ENST00000298396 USP44Q9H0E7 712 aa7.47□□□□□ -1.21
SSX3-201ENST00000298396 TSR3Q9UJK0 312 aaKnown RBP7.47□□□□□ -1.21
SSX3-201ENST00000298396 CDHR2Q9BYE9 1310 aa7.47□□□□□ -1.21
SSX3-201ENST00000298396 CHD4Q14839 1912 aa7.46□□□□□ -1.21
SSX3-201ENST00000298396 ZNF646O15015 1829 aaPredicted RBP7.46□□□□□ -1.21
SSX3-201ENST00000298396 IPO8O15397 1037 aaKnown RBP7.46□□□□□ -1.22
SSX3-201ENST00000298396 KCNA3P22001 575 aa7.46□□□□□ -1.22
SSX3-201ENST00000298396 POLD1P28340 1107 aa7.46□□□□□ -1.22
SSX3-201ENST00000298396 SLC4A3P48751 1232 aa7.46□□□□□ -1.22
SSX3-201ENST00000298396 USP46P62068 366 aa7.46□□□□□ -1.22
SSX3-201ENST00000298396 NEXNQ0ZGT2 675 aa7.46□□□□□ -1.22
SSX3-201ENST00000298396 TUSC1Q2TAM9 212 aa7.46□□□□□ -1.22
SSX3-201ENST00000298396 SLC10A5Q5PT55 438 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms