RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 HDGFL1Q5TGJ6 251 aa20.63■□□□□ 0.89
CDKN1B-201ENST00000228872 ZSCAN16Q9H4T2 348 aaPredicted RBP20.63■□□□□ 0.89
CDKN1B-201ENST00000228872 TEX35Q5T0J7 233 aa20.63■□□□□ 0.89
CDKN1B-201ENST00000228872 CEP57L1Q8IYX8 460 aa20.63■□□□□ 0.89
CDKN1B-201ENST00000228872 SNRKQ9NRH2 765 aa20.63■□□□□ 0.89
CDKN1B-201ENST00000228872 TOM1O60784 492 aa20.62■□□□□ 0.89
CDKN1B-201ENST00000228872 CEBPZQ03701 1054 aaKnown RBP20.62■□□□□ 0.89
CDKN1B-201ENST00000228872 TEFQ10587 303 aa20.62■□□□□ 0.89
CDKN1B-201ENST00000228872 IFIT2P09913 472 aaKnown RBP20.62■□□□□ 0.89
CDKN1B-201ENST00000228872 TMCO3Q6UWJ1 677 aa20.62■□□□□ 0.89
CDKN1B-201ENST00000228872 NEK11Q8NG66 645 aa20.62■□□□□ 0.89
CDKN1B-201ENST00000228872 CARD10Q9BWT7 1032 aa20.62■□□□□ 0.89
CDKN1B-201ENST00000228872 ORC3Q9UBD5 711 aaPredicted RBP20.62■□□□□ 0.89
CDKN1B-201ENST00000228872 H3BQV1 296 aa20.61■□□□□ 0.89
CDKN1B-201ENST00000228872 HIP1O00291 1037 aa20.61■□□□□ 0.89
CDKN1B-201ENST00000228872 PHKG2P15735 406 aa20.61■□□□□ 0.89
CDKN1B-201ENST00000228872 TPM4P67936 248 aa20.61■□□□□ 0.89
CDKN1B-201ENST00000228872 IFFO2Q5TF58 517 aa20.61■□□□□ 0.89
CDKN1B-201ENST00000228872 TOM1L2Q6ZVM7 507 aa20.61■□□□□ 0.89
CDKN1B-201ENST00000228872 CCDC150Q8NCX0 1101 aa20.61■□□□□ 0.89
CDKN1B-201ENST00000228872 ARGLU1Q9NWB6 273 aaPredicted RBP20.61■□□□□ 0.89
CDKN1B-201ENST00000228872 SHANK3Q9BYB0 1731 aa20.61■□□□□ 0.89
CDKN1B-201ENST00000228872 MRC1P22897 1456 aa20.61■□□□□ 0.89
CDKN1B-201ENST00000228872 POLR3GO15318 223 aaPredicted RBP20.61■□□□□ 0.89
CDKN1B-201ENST00000228872 ADD1P35611 737 aaKnown RBP20.61■□□□□ 0.89
CDKN1B-201ENST00000228872 ARMCX5Q6P1M9 558 aa20.61■□□□□ 0.89
CDKN1B-201ENST00000228872 CCDC73Q6ZRK6 1079 aa20.61■□□□□ 0.89
CDKN1B-201ENST00000228872 KDM6AO15550 1401 aaPredicted RBP20.61■□□□□ 0.89
CDKN1B-201ENST00000228872 TUBB4AP04350 444 aa20.61■□□□□ 0.89
CDKN1B-201ENST00000228872 KCNJ6P48051 423 aa20.61■□□□□ 0.89
CDKN1B-201ENST00000228872 EIF4A1P60842 406 aaKnown RBP20.61■□□□□ 0.89
CDKN1B-201ENST00000228872 TXLNBQ8N3L3 684 aa20.61■□□□□ 0.89
CDKN1B-201ENST00000228872 RCOR1Q9UKL0 485 aa20.61■□□□□ 0.89
CDKN1B-201ENST00000228872 KINO60870 393 aaKnown RBP20.6■□□□□ 0.89
CDKN1B-201ENST00000228872 MUM1L1Q5H9M0 696 aa20.6■□□□□ 0.89
CDKN1B-201ENST00000228872 BEND3Q5T5X7 828 aa20.6■□□□□ 0.89
CDKN1B-201ENST00000228872 IFNL2Q8IZJ0 200 aa20.6■□□□□ 0.89
CDKN1B-201ENST00000228872 A0A0D9SFI3 127 aa20.6■□□□□ 0.89
CDKN1B-201ENST00000228872 GORABQ5T7V8 394 aa20.59■□□□□ 0.89
CDKN1B-201ENST00000228872 ENGASEQ8NFI3 743 aa20.59■□□□□ 0.89
CDKN1B-201ENST00000228872 UBXN4Q92575 508 aa20.59■□□□□ 0.89
CDKN1B-201ENST00000228872 FTOQ9C0B1 505 aaKnown RBP eCLIP20.59■□□□□ 0.89
CDKN1B-201ENST00000228872 BTBD11A6QL63 1104 aa20.59■□□□□ 0.89
CDKN1B-201ENST00000228872 KCNQ3O43525 872 aa20.59■□□□□ 0.89
CDKN1B-201ENST00000228872 EIF2S2P20042 333 aaKnown RBP20.59■□□□□ 0.89
CDKN1B-201ENST00000228872 UBXN6Q9BZV1 441 aa20.59■□□□□ 0.89
CDKN1B-201ENST00000228872 NAT10Q9H0A0 1025 aaKnown RBP20.59■□□□□ 0.89
CDKN1B-201ENST00000228872 PLCH1Q4KWH8 1693 aa20.58■□□□□ 0.89
CDKN1B-201ENST00000228872 HOXB7P09629 217 aa20.58■□□□□ 0.89
CDKN1B-201ENST00000228872 TMC6Q7Z403 805 aa20.58■□□□□ 0.89
CDKN1B-201ENST00000228872 AACSQ86V21 672 aa20.58■□□□□ 0.89
CDKN1B-201ENST00000228872 SFPQP23246 707 aaKnown RBP eCLIP20.58■□□□□ 0.88
CDKN1B-201ENST00000228872 FAM160A1Q05DH4 1040 aa20.58■□□□□ 0.88
CDKN1B-201ENST00000228872 MTX1Q13505 466 aa20.58■□□□□ 0.88
CDKN1B-201ENST00000228872 FBXW7Q969H0 707 aa20.58■□□□□ 0.88
CDKN1B-201ENST00000228872 HMG20BQ9P0W2 317 aa20.58■□□□□ 0.88
CDKN1B-201ENST00000228872 MED23Q9ULK4 1368 aa20.57■□□□□ 0.88
CDKN1B-201ENST00000228872 TSGA10IPQ3SY00 556 aa20.57■□□□□ 0.88
CDKN1B-201ENST00000228872 DNAAF4Q8WXU2 420 aa20.57■□□□□ 0.88
CDKN1B-201ENST00000228872 ERCC4Q92889 916 aaPredicted RBP20.57■□□□□ 0.88
CDKN1B-201ENST00000228872 PHLPP2Q6ZVD8 1323 aa20.57■□□□□ 0.88
CDKN1B-201ENST00000228872 EVA1CP58658 441 aa20.57■□□□□ 0.88
CDKN1B-201ENST00000228872 ETF1P62495 437 aaKnown RBP20.57■□□□□ 0.88
CDKN1B-201ENST00000228872 NFATC2IPQ8NCF5 419 aa20.57■□□□□ 0.88
CDKN1B-201ENST00000228872 XPO4Q9C0E2 1151 aaKnown RBP20.57■□□□□ 0.88
CDKN1B-201ENST00000228872 CYP27B1O15528 508 aa20.56■□□□□ 0.88
CDKN1B-201ENST00000228872 SEC31AO94979 1220 aaKnown RBP20.56■□□□□ 0.88
CDKN1B-201ENST00000228872 SMC2O95347 1197 aa20.56■□□□□ 0.88
CDKN1B-201ENST00000228872 ST5P78524 1137 aa20.56■□□□□ 0.88
CDKN1B-201ENST00000228872 SMARCE1Q969G3 411 aa20.56■□□□□ 0.88
CDKN1B-201ENST00000228872 PA2G4Q9UQ80 394 aaKnown RBP20.56■□□□□ 0.88
CDKN1B-201ENST00000228872 ATP8B1O43520 1251 aa20.56■□□□□ 0.88
CDKN1B-201ENST00000228872 TADA3O75528 432 aa20.56■□□□□ 0.88
CDKN1B-201ENST00000228872 HOMER1Q86YM7 354 aa20.56■□□□□ 0.88
CDKN1B-201ENST00000228872 ERC1Q8IUD2 1116 aa20.56■□□□□ 0.88
CDKN1B-201ENST00000228872 DNAI1Q9UI46 699 aa20.56■□□□□ 0.88
CDKN1B-201ENST00000228872 WNK3Q9BYP7 1800 aa20.56■□□□□ 0.88
CDKN1B-201ENST00000228872 KRBA2Q6ZNG9 492 aa20.55■□□□□ 0.88
CDKN1B-201ENST00000228872 FSIP1Q8NA03 581 aa20.55■□□□□ 0.88
CDKN1B-201ENST00000228872 DCAF5Q96JK2 942 aa20.55■□□□□ 0.88
CDKN1B-201ENST00000228872 STRN4Q9NRL3 753 aa20.55■□□□□ 0.88
CDKN1B-201ENST00000228872 IFNKQ9P0W0 207 aa20.55■□□□□ 0.88
CDKN1B-201ENST00000228872 JCADQ9P266 1359 aa20.55■□□□□ 0.88
CDKN1B-201ENST00000228872 HEG1Q9ULI3 1381 aa20.55■□□□□ 0.88
CDKN1B-201ENST00000228872 PI4KAP2A4QPH2 592 aa20.55■□□□□ 0.88
CDKN1B-201ENST00000228872 IL2RBP14784 551 aa20.55■□□□□ 0.88
CDKN1B-201ENST00000228872 PI4KAP1Q8N8J0 262 aa20.55■□□□□ 0.88
CDKN1B-201ENST00000228872 MNS1Q8NEH6 495 aa20.55■□□□□ 0.88
CDKN1B-201ENST00000228872 CHMP4AQ9BY43 222 aa20.55■□□□□ 0.88
CDKN1B-201ENST00000228872 SLC52A2Q9HAB3 445 aa20.55■□□□□ 0.88
CDKN1B-201ENST00000228872 CHPF2Q9P2E5 772 aa20.55■□□□□ 0.88
CDKN1B-201ENST00000228872 NRDCO43847 1150 aa20.54■□□□□ 0.88
CDKN1B-201ENST00000228872 ZNF589Q86UQ0 364 aaPredicted RBP20.54■□□□□ 0.88
CDKN1B-201ENST00000228872 USP28Q96RU2 1077 aa20.54■□□□□ 0.88
CDKN1B-201ENST00000228872 BTG4Q9NY30 223 aa20.54■□□□□ 0.88
CDKN1B-201ENST00000228872 PCDH11XQ9BZA7 1347 aa20.54■□□□□ 0.88
CDKN1B-201ENST00000228872 PCDH11YQ9BZA8 1340 aa20.54■□□□□ 0.88
CDKN1B-201ENST00000228872 NRAPQ86VF7 1730 aa20.54■□□□□ 0.88
CDKN1B-201ENST00000228872 FSD1Q9BTV5 496 aa20.54■□□□□ 0.88
CDKN1B-201ENST00000228872 SRRTQ9BXP5 876 aaKnown RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms