RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 NUTM2AQ8IVF1 878 aaPredicted RBP26.26■■□□□ 1.79
CCDC9-201ENST00000221922 ZNF34Q8IZ26 560 aa26.26■■□□□ 1.79
CCDC9-201ENST00000221922 TCEANC2Q96MN5 208 aa26.26■■□□□ 1.79
CCDC9-201ENST00000221922 CYP21A2P08686 494 aa26.26■■□□□ 1.79
CCDC9-201ENST00000221922 SYNE4Q8N205 404 aa26.26■■□□□ 1.79
CCDC9-201ENST00000221922 CCDC87Q9NVE4 849 aa26.26■■□□□ 1.79
CCDC9-201ENST00000221922 USP25Q9UHP3 1055 aa26.26■■□□□ 1.79
CCDC9-201ENST00000221922 IRS4O14654 1257 aaPredicted RBP26.25■■□□□ 1.79
CCDC9-201ENST00000221922 COL9A3Q14050 684 aaPredicted RBP26.25■■□□□ 1.79
CCDC9-201ENST00000221922 INTS5Q6P9B9 1019 aaKnown RBP26.25■■□□□ 1.79
CCDC9-201ENST00000221922 TRMT112Q9UI30 125 aaKnown RBP26.25■■□□□ 1.79
CCDC9-201ENST00000221922 LAMA4Q16363 1823 aa26.25■■□□□ 1.79
CCDC9-201ENST00000221922 ABCC12Q96J65 1359 aa26.24■■□□□ 1.79
CCDC9-201ENST00000221922 CCDC158Q5M9N0 1113 aa26.24■■□□□ 1.79
CCDC9-201ENST00000221922 TBC1D2BQ9UPU7 963 aa26.24■■□□□ 1.79
CCDC9-201ENST00000221922 RNF113AO15541 343 aaKnown RBP26.24■■□□□ 1.79
CCDC9-201ENST00000221922 KIAA2012Q0VF49 1180 aa26.24■■□□□ 1.79
CCDC9-201ENST00000221922 CCDC85AQ96PX6 553 aaPredicted RBP26.24■■□□□ 1.79
CCDC9-201ENST00000221922 RIPOR2Q9Y4F9 1068 aa26.24■■□□□ 1.79
CCDC9-201ENST00000221922 UBN2Q6ZU65 1347 aa26.23■■□□□ 1.79
CCDC9-201ENST00000221922 LRP5O75197 1615 aa26.23■■□□□ 1.79
CCDC9-201ENST00000221922 PDE8AO60658 829 aa26.23■■□□□ 1.79
CCDC9-201ENST00000221922 ADCY5O95622 1261 aa26.23■■□□□ 1.79
CCDC9-201ENST00000221922 CHGBP05060 677 aa26.23■■□□□ 1.79
CCDC9-201ENST00000221922 ITGA6P23229 1130 aa26.23■■□□□ 1.79
CCDC9-201ENST00000221922 XAGE2Q96GT9 111 aa26.23■■□□□ 1.79
CCDC9-201ENST00000221922 GREM2Q9H772 168 aa26.23■■□□□ 1.79
CCDC9-201ENST00000221922 LOC102724428A0A0B4J2F2 783 aa26.23■■□□□ 1.79
CCDC9-201ENST00000221922 ANKRD18BA2A2Z9 1011 aa26.23■■□□□ 1.79
CCDC9-201ENST00000221922 KDM4AO75164 1064 aa26.23■■□□□ 1.79
CCDC9-201ENST00000221922 SIK1P57059 783 aa26.23■■□□□ 1.79
CCDC9-201ENST00000221922 ACSBG1Q96GR2 724 aa26.23■■□□□ 1.79
CCDC9-201ENST00000221922 AK7Q96M32 723 aa26.23■■□□□ 1.79
CCDC9-201ENST00000221922 ELP1O95163 1332 aa26.22■■□□□ 1.79
CCDC9-201ENST00000221922 ATP6V1AP38606 617 aa26.22■■□□□ 1.79
CCDC9-201ENST00000221922 GORABQ5T7V8 394 aa26.22■■□□□ 1.79
CCDC9-201ENST00000221922 ZNF831Q5JPB2 1677 aa26.22■■□□□ 1.79
CCDC9-201ENST00000221922 DTNBO60941 627 aa26.21■■□□□ 1.79
CCDC9-201ENST00000221922 CRKLP46109 303 aaKnown RBP26.21■■□□□ 1.79
CCDC9-201ENST00000221922 TTC39AQ5SRH9 613 aa26.21■■□□□ 1.79
CCDC9-201ENST00000221922 GIMAP6Q6P9H5 292 aa26.21■■□□□ 1.79
CCDC9-201ENST00000221922 GTF3C6Q969F1 213 aa26.21■■□□□ 1.79
CCDC9-201ENST00000221922 PIP4K2BP78356 416 aa26.21■■□□□ 1.79
CCDC9-201ENST00000221922 KRT85P78386 507 aa26.21■■□□□ 1.79
CCDC9-201ENST00000221922 Q6ZUG5 572 aa26.21■■□□□ 1.79
CCDC9-201ENST00000221922 ADORA1P30542 326 aa26.2■■□□□ 1.78
CCDC9-201ENST00000221922 LDHAL6AQ6ZMR3 332 aa26.2■■□□□ 1.78
CCDC9-201ENST00000221922 ZFYP08048 801 aaPredicted RBP26.19■■□□□ 1.78
CCDC9-201ENST00000221922 CDC37L1Q7L3B6 337 aa26.19■■□□□ 1.78
CCDC9-201ENST00000221922 PDCL3Q9H2J4 239 aa26.19■■□□□ 1.78
CCDC9-201ENST00000221922 COL5A3P25940 1745 aaPredicted RBP26.19■■□□□ 1.78
CCDC9-201ENST00000221922 TPRNQ4KMQ1 711 aa26.19■■□□□ 1.78
CCDC9-201ENST00000221922 METTL24Q5JXM2 366 aa26.19■■□□□ 1.78
CCDC9-201ENST00000221922 TTC6Q86TZ1 520 aa26.19■■□□□ 1.78
CCDC9-201ENST00000221922 SMARCC1Q92922 1105 aaPredicted RBP26.19■■□□□ 1.78
CCDC9-201ENST00000221922 MAST3O60307 1309 aa26.19■■□□□ 1.78
CCDC9-201ENST00000221922 HSP90B1P14625 803 aaKnown RBP26.18■■□□□ 1.78
CCDC9-201ENST00000221922 STK3Q13188 491 aa26.18■■□□□ 1.78
CCDC9-201ENST00000221922 ATP2B3Q16720 1220 aa26.18■■□□□ 1.78
CCDC9-201ENST00000221922 SASS6Q6UVJ0 657 aa26.18■■□□□ 1.78
CCDC9-201ENST00000221922 DHX32Q7L7V1 743 aaKnown RBP26.18■■□□□ 1.78
CCDC9-201ENST00000221922 MYH7P12883 1935 aa26.18■■□□□ 1.78
CCDC9-201ENST00000221922 MYH14Q7Z406 1995 aaKnown RBP26.18■■□□□ 1.78
CCDC9-201ENST00000221922 HSPD1P10809 573 aaKnown RBP26.18■■□□□ 1.78
CCDC9-201ENST00000221922 FGD1P98174 961 aa26.18■■□□□ 1.78
CCDC9-201ENST00000221922 ITPK1Q13572 414 aa26.18■■□□□ 1.78
CCDC9-201ENST00000221922 A0A0G2JS52 829 aa26.17■■□□□ 1.78
CCDC9-201ENST00000221922 VGLL2Q8N8G2 317 aa26.17■■□□□ 1.78
CCDC9-201ENST00000221922 PIBF1Q8WXW3 757 aa26.17■■□□□ 1.78
CCDC9-201ENST00000221922 UQCRHLA0A096LP55 91 aa26.16■■□□□ 1.78
CCDC9-201ENST00000221922 UQCRHP07919 91 aa26.16■■□□□ 1.78
CCDC9-201ENST00000221922 FKBP4Q02790 459 aaKnown RBP eCLIP26.16■■□□□ 1.78
CCDC9-201ENST00000221922 GLIPR1L2Q4G1C9 344 aa26.16■■□□□ 1.78
CCDC9-201ENST00000221922 STOX1Q6ZVD7 989 aa26.16■■□□□ 1.78
CCDC9-201ENST00000221922 CNNM1Q9NRU3 951 aa26.16■■□□□ 1.78
CCDC9-201ENST00000221922 LAMB2P55268 1798 aa26.16■■□□□ 1.78
CCDC9-201ENST00000221922 ZNF512BQ96KM6 892 aaPredicted RBP26.16■■□□□ 1.78
CCDC9-201ENST00000221922 LLPHQ9BRT6 129 aaKnown RBP26.16■■□□□ 1.78
CCDC9-201ENST00000221922 CAMTA2O94983 1202 aa26.15■■□□□ 1.78
CCDC9-201ENST00000221922 CCDC192P0DO97 292 aa26.15■■□□□ 1.78
CCDC9-201ENST00000221922 PARP10Q53GL7 1025 aa26.15■■□□□ 1.78
CCDC9-201ENST00000221922 ARAP2Q8WZ64 1704 aa26.15■■□□□ 1.78
CCDC9-201ENST00000221922 SCAND2PQ9GZW5 306 aaPredicted RBP26.15■■□□□ 1.78
CCDC9-201ENST00000221922 BCORQ6W2J9 1755 aa26.14■■□□□ 1.78
CCDC9-201ENST00000221922 FERMT3Q86UX7 667 aa26.14■■□□□ 1.77
CCDC9-201ENST00000221922 BRF1Q92994 677 aa26.14■■□□□ 1.77
CCDC9-201ENST00000221922 CTNNA3Q9UI47 895 aa26.14■■□□□ 1.77
CCDC9-201ENST00000221922 DDX60Q8IY21 1712 aaKnown RBP26.14■■□□□ 1.77
CCDC9-201ENST00000221922 AKAP11Q9UKA4 1901 aa26.14■■□□□ 1.77
CCDC9-201ENST00000221922 PFKFB2O60825 505 aa26.13■■□□□ 1.77
CCDC9-201ENST00000221922 SLFNL1Q499Z3 407 aa26.13■■□□□ 1.77
CCDC9-201ENST00000221922 SUSD4Q5VX71 490 aa26.13■■□□□ 1.77
CCDC9-201ENST00000221922 CHMP4CQ96CF2 233 aa26.13■■□□□ 1.77
CCDC9-201ENST00000221922 M0R2C6 588 aa26.13■■□□□ 1.77
CCDC9-201ENST00000221922 DYNC1I1O14576 645 aa26.13■■□□□ 1.77
CCDC9-201ENST00000221922 UTP14AQ9BVJ6 771 aaKnown RBP26.13■■□□□ 1.77
CCDC9-201ENST00000221922 AGXT2Q9BYV1 514 aa26.13■■□□□ 1.77
CCDC9-201ENST00000221922 BCL9LQ86UU0 1499 aa26.12■■□□□ 1.77
CCDC9-201ENST00000221922 E7EWF7 191 aa26.12■■□□□ 1.77
CCDC9-201ENST00000221922 PDE8BO95263 885 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms