RNA–Protein interactions for RNA: ENST00000216492.9

CHGA-201, Transcript of chromogranin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGA, Length 2,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-201ENST00000216492 GAS2L3Q86XJ1 694 aa20.3■□□□□ 0.84
CHGA-201ENST00000216492 LMBRD1Q9NUN5 540 aa20.3■□□□□ 0.84
CHGA-201ENST00000216492 SERPINB2P05120 415 aa20.3■□□□□ 0.84
CHGA-201ENST00000216492 FKBP4Q02790 459 aaKnown RBP eCLIP20.3■□□□□ 0.84
CHGA-201ENST00000216492 CHRNDQ07001 517 aa20.3■□□□□ 0.84
CHGA-201ENST00000216492 COL23A1Q86Y22 540 aaPredicted RBP20.3■□□□□ 0.84
CHGA-201ENST00000216492 CELF1Q92879 486 aaKnown RBP20.3■□□□□ 0.84
CHGA-201ENST00000216492 FAM227BQ96M60 508 aa20.3■□□□□ 0.84
CHGA-201ENST00000216492 RAD50Q92878 1312 aa20.29■□□□□ 0.84
CHGA-201ENST00000216492 RPS8P62241 208 aaKnown RBP20.29■□□□□ 0.84
CHGA-201ENST00000216492 KBTBD3Q8NAB2 608 aa20.29■□□□□ 0.84
CHGA-201ENST00000216492 FLAD1Q8NFF5 587 aa20.29■□□□□ 0.84
CHGA-201ENST00000216492 UBE2Q2Q8WVN8 375 aa20.29■□□□□ 0.84
CHGA-201ENST00000216492 UBR3Q6ZT12 1888 aa20.29■□□□□ 0.84
CHGA-201ENST00000216492 NMIQ13287 307 aaPredicted RBP20.28■□□□□ 0.84
CHGA-201ENST00000216492 PRR5LQ6MZQ0 368 aa20.28■□□□□ 0.84
CHGA-201ENST00000216492 ZDHHC9Q9Y397 364 aa20.28■□□□□ 0.84
CHGA-201ENST00000216492 C4AP0C0L4 1744 aa20.28■□□□□ 0.84
CHGA-201ENST00000216492 SNAP23O00161 211 aa20.28■□□□□ 0.84
CHGA-201ENST00000216492 SLC5A1P13866 664 aa20.28■□□□□ 0.84
CHGA-201ENST00000216492 NCLP19338 710 aaKnown RBP20.28■□□□□ 0.84
CHGA-201ENST00000216492 ZNF445P59923 1031 aa20.27■□□□□ 0.84
CHGA-201ENST00000216492 ZNF512BQ96KM6 892 aaPredicted RBP20.27■□□□□ 0.84
CHGA-201ENST00000216492 SNRKQ9NRH2 765 aa20.27■□□□□ 0.84
CHGA-201ENST00000216492 MINPP1Q9UNW1 487 aa20.27■□□□□ 0.84
CHGA-201ENST00000216492 EN1Q05925 392 aaPredicted RBP20.26■□□□□ 0.83
CHGA-201ENST00000216492 SCARF1Q14162 830 aa20.26■□□□□ 0.83
CHGA-201ENST00000216492 CCDC102BQ68D86 513 aa20.26■□□□□ 0.83
CHGA-201ENST00000216492 NLGN1Q8N2Q7 840 aa20.26■□□□□ 0.83
CHGA-201ENST00000216492 ANP32BQ92688 251 aaKnown RBP20.26■□□□□ 0.83
CHGA-201ENST00000216492 LSG1Q9H089 658 aaKnown RBP20.26■□□□□ 0.83
CHGA-201ENST00000216492 PRPF40AO75400 957 aaKnown RBP20.26■□□□□ 0.83
CHGA-201ENST00000216492 ST5P78524 1137 aa20.26■□□□□ 0.83
CHGA-201ENST00000216492 TICAM2Q86XR7 235 aa20.26■□□□□ 0.83
CHGA-201ENST00000216492 RRAGDQ9NQL2 400 aaPredicted RBP20.26■□□□□ 0.83
CHGA-201ENST00000216492 A0A0D9SFI3 127 aa20.25■□□□□ 0.83
CHGA-201ENST00000216492 EZH2Q15910 746 aaKnown RBP20.25■□□□□ 0.83
CHGA-201ENST00000216492 CAVIN1Q6NZI2 390 aaKnown RBP20.25■□□□□ 0.83
CHGA-201ENST00000216492 TRIM44Q96DX7 344 aaPredicted RBP20.25■□□□□ 0.83
CHGA-201ENST00000216492 CAMKK2Q96RR4 588 aa20.25■□□□□ 0.83
CHGA-201ENST00000216492 UPF3BQ9BZI7 483 aaKnown RBP20.25■□□□□ 0.83
CHGA-201ENST00000216492 COL24A1Q17RW2 1714 aa20.25■□□□□ 0.83
CHGA-201ENST00000216492 LRP5O75197 1615 aa20.25■□□□□ 0.83
CHGA-201ENST00000216492 POLRMTO00411 1230 aaKnown RBP20.25■□□□□ 0.83
CHGA-201ENST00000216492 BRD1O95696 1058 aa20.25■□□□□ 0.83
CHGA-201ENST00000216492 ZAP70P43403 619 aa20.25■□□□□ 0.83
CHGA-201ENST00000216492 DDR1Q08345 913 aa20.25■□□□□ 0.83
CHGA-201ENST00000216492 LAMB2P55268 1798 aa20.25■□□□□ 0.83
CHGA-201ENST00000216492 MCAMP43121 646 aa20.24■□□□□ 0.83
CHGA-201ENST00000216492 PHKA1P46020 1223 aa20.24■□□□□ 0.83
CHGA-201ENST00000216492 NASPP49321 788 aaPredicted RBP20.24■□□□□ 0.83
CHGA-201ENST00000216492 UQCRFS1P1P0C7P4 283 aa20.23■□□□□ 0.83
CHGA-201ENST00000216492 ZSCAN23Q3MJ62 389 aa20.23■□□□□ 0.83
CHGA-201ENST00000216492 NOL8Q76FK4 1167 aaKnown RBP20.23■□□□□ 0.83
CHGA-201ENST00000216492 RFX7Q2KHR2 1363 aa20.23■□□□□ 0.83
CHGA-201ENST00000216492 MBD3O95983 291 aa20.23■□□□□ 0.83
CHGA-201ENST00000216492 CHGBP05060 677 aa20.23■□□□□ 0.83
CHGA-201ENST00000216492 PTH1RQ03431 593 aa20.23■□□□□ 0.83
CHGA-201ENST00000216492 ARID4AP29374 1257 aaPredicted RBP20.22■□□□□ 0.83
CHGA-201ENST00000216492 CCDC173Q0VFZ6 552 aa20.22■□□□□ 0.83
CHGA-201ENST00000216492 PI16Q6UXB8 463 aa20.22■□□□□ 0.83
CHGA-201ENST00000216492 SF3B2Q13435 895 aaKnown RBP20.22■□□□□ 0.83
CHGA-201ENST00000216492 UBE4AQ14139 1066 aa20.22■□□□□ 0.83
CHGA-201ENST00000216492 LRRFIP1Q32MZ4 808 aaKnown RBP20.22■□□□□ 0.83
CHGA-201ENST00000216492 MCMDC2Q4G0Z9 681 aa20.22■□□□□ 0.83
CHGA-201ENST00000216492 SNX14Q9Y5W7 946 aa20.22■□□□□ 0.83
CHGA-201ENST00000216492 PNPLA7Q6ZV29 1317 aa20.22■□□□□ 0.83
CHGA-201ENST00000216492 BCAMP50895 628 aa20.21■□□□□ 0.83
CHGA-201ENST00000216492 COL4A1P02462 1669 aa20.21■□□□□ 0.83
CHGA-201ENST00000216492 RNF113AO15541 343 aaKnown RBP20.2■□□□□ 0.82
CHGA-201ENST00000216492 GRAPQ13588 217 aa20.2■□□□□ 0.82
CHGA-201ENST00000216492 ZNF589Q86UQ0 364 aaPredicted RBP20.2■□□□□ 0.82
CHGA-201ENST00000216492 GRAPLQ8TC17 118 aaPredicted RBP20.2■□□□□ 0.82
CHGA-201ENST00000216492 RPGRQ92834 1020 aaKnown RBP20.2■□□□□ 0.82
CHGA-201ENST00000216492 MAP4K1Q92918 833 aa20.2■□□□□ 0.82
CHGA-201ENST00000216492 CCDC171Q6TFL3 1326 aa20.2■□□□□ 0.82
CHGA-201ENST00000216492 WDR33Q9C0J8 1336 aaKnown RBP20.2■□□□□ 0.82
CHGA-201ENST00000216492 SLC15A2Q16348 729 aa20.2■□□□□ 0.82
CHGA-201ENST00000216492 CRY2Q49AN0 593 aa20.2■□□□□ 0.82
CHGA-201ENST00000216492 SEC62Q99442 399 aaKnown RBP20.2■□□□□ 0.82
CHGA-201ENST00000216492 ANKRD2Q9GZV1 360 aa20.2■□□□□ 0.82
CHGA-201ENST00000216492 HELLSQ9NRZ9 838 aa20.2■□□□□ 0.82
CHGA-201ENST00000216492 WTIPA6NIX2 430 aaPredicted RBP20.19■□□□□ 0.82
CHGA-201ENST00000216492 TTF1Q15361 905 aaPredicted RBP20.19■□□□□ 0.82
CHGA-201ENST00000216492 SLFNL1Q499Z3 407 aa20.19■□□□□ 0.82
CHGA-201ENST00000216492 GPT2Q8TD30 523 aa20.19■□□□□ 0.82
CHGA-201ENST00000216492 HMG20BQ9P0W2 317 aa20.19■□□□□ 0.82
CHGA-201ENST00000216492 MED23Q9ULK4 1368 aa20.19■□□□□ 0.82
CHGA-201ENST00000216492 CLCN1P35523 988 aa20.18■□□□□ 0.82
CHGA-201ENST00000216492 FOXD4L5Q5VV16 416 aaPredicted RBP20.18■□□□□ 0.82
CHGA-201ENST00000216492 FOXD4L4Q8WXT5 416 aaPredicted RBP20.18■□□□□ 0.82
CHGA-201ENST00000216492 ZFYP08048 801 aaPredicted RBP20.18■□□□□ 0.82
CHGA-201ENST00000216492 ZMYM1Q5SVZ6 1142 aa20.18■□□□□ 0.82
CHGA-201ENST00000216492 SPATA5Q8NB90 893 aa20.18■□□□□ 0.82
CHGA-201ENST00000216492 STK32BQ9NY57 414 aa20.18■□□□□ 0.82
CHGA-201ENST00000216492 TNS1Q9HBL0 1735 aaKnown RBP20.17■□□□□ 0.82
CHGA-201ENST00000216492 BAG6P46379 1132 aa20.17■□□□□ 0.82
CHGA-201ENST00000216492 KCNJ4P48050 445 aa20.17■□□□□ 0.82
CHGA-201ENST00000216492 NECTIN1Q15223 517 aa20.17■□□□□ 0.82
CHGA-201ENST00000216492 CAVIN4Q5BKX8 364 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms