RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 TRDNQ13061 729 aa12.97□□□□□ -0.33
ACTN1-201ENST00000193403 RESTQ13127 1097 aa12.97□□□□□ -0.33
ACTN1-201ENST00000193403 TRIM29Q14134 588 aa12.97□□□□□ -0.33
ACTN1-201ENST00000193403 MCMDC2Q4G0Z9 681 aa12.97□□□□□ -0.33
ACTN1-201ENST00000193403 KLHL10Q6JEL2 608 aa12.97□□□□□ -0.33
ACTN1-201ENST00000193403 ARHGEF10O15013 1369 aa12.97□□□□□ -0.33
ACTN1-201ENST00000193403 TAF5LO75529 589 aa12.96□□□□□ -0.33
ACTN1-201ENST00000193403 CYP21A2P08686 494 aa12.96□□□□□ -0.33
ACTN1-201ENST00000193403 CCDC150Q8NCX0 1101 aa12.96□□□□□ -0.33
ACTN1-201ENST00000193403 LINS1Q8NG48 757 aa12.96□□□□□ -0.33
ACTN1-201ENST00000193403 RASSF8Q8NHQ8 419 aa12.96□□□□□ -0.33
ACTN1-201ENST00000193403 A2ML1A8K2U0 1454 aa12.96□□□□□ -0.33
ACTN1-201ENST00000193403 KLF18A0A0U1RQI7 1052 aa12.96□□□□□ -0.33
ACTN1-201ENST00000193403 TIMM10P62072 90 aa12.96□□□□□ -0.33
ACTN1-201ENST00000193403 MCM6Q14566 821 aa12.96□□□□□ -0.33
ACTN1-201ENST00000193403 MRFAP1L1Q96HT8 127 aa12.96□□□□□ -0.33
ACTN1-201ENST00000193403 ARHGAP31Q2M1Z3 1444 aa12.96□□□□□ -0.34
ACTN1-201ENST00000193403 NDUFA8P51970 172 aa12.96□□□□□ -0.34
ACTN1-201ENST00000193403 EVCP57679 992 aa12.96□□□□□ -0.34
ACTN1-201ENST00000193403 GPHNQ9NQX3 736 aaPredicted RBP12.96□□□□□ -0.34
ACTN1-201ENST00000193403 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.96□□□□□ -0.34
ACTN1-201ENST00000193403 IGSF1Q8N6C5 1336 aa12.95□□□□□ -0.34
ACTN1-201ENST00000193403 SPTLC2O15270 562 aa12.95□□□□□ -0.34
ACTN1-201ENST00000193403 SPECC1Q5M775 1068 aa12.95□□□□□ -0.34
ACTN1-201ENST00000193403 ALDH1L1O75891 902 aa12.95□□□□□ -0.34
ACTN1-201ENST00000193403 CASQ1P31415 396 aa12.95□□□□□ -0.34
ACTN1-201ENST00000193403 DHX32Q7L7V1 743 aaKnown RBP12.95□□□□□ -0.34
ACTN1-201ENST00000193403 PPP1R13BQ96KQ4 1090 aa12.95□□□□□ -0.34
ACTN1-201ENST00000193403 PCDHA7Q9UN72 937 aa12.95□□□□□ -0.34
ACTN1-201ENST00000193403 IFIT1P09914 478 aaKnown RBP12.95□□□□□ -0.34
ACTN1-201ENST00000193403 CLCN6P51797 869 aa12.95□□□□□ -0.34
ACTN1-201ENST00000193403 CPLX2Q6PUV4 134 aaKnown RBP12.95□□□□□ -0.34
ACTN1-201ENST00000193403 ZBTB3Q9H5J0 574 aa12.95□□□□□ -0.34
ACTN1-201ENST00000193403 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.95□□□□□ -0.344e-9■■□□□ 14.3
ACTN1-201ENST00000193403 TBX22Q9Y458 520 aa12.94□□□□□ -0.34
ACTN1-201ENST00000193403 PHACTR2O75167 634 aa12.94□□□□□ -0.34
ACTN1-201ENST00000193403 ATP1A3P13637 1013 aa12.94□□□□□ -0.34
ACTN1-201ENST00000193403 GYS2P54840 703 aa12.94□□□□□ -0.34
ACTN1-201ENST00000193403 FANCCQ00597 558 aa12.94□□□□□ -0.34
ACTN1-201ENST00000193403 MICU3Q86XE3 530 aa12.94□□□□□ -0.34
ACTN1-201ENST00000193403 C10orf67Q8IYJ2 551 aa12.94□□□□□ -0.34
ACTN1-201ENST00000193403 LRRN4CLQ8ND94 238 aa12.94□□□□□ -0.34
ACTN1-201ENST00000193403 CCDC12Q8WUD4 166 aaPredicted RBP12.94□□□□□ -0.34
ACTN1-201ENST00000193403 TTC21AQ8NDW8 1320 aa12.94□□□□□ -0.34
ACTN1-201ENST00000193403 RICTORQ6R327 1708 aa12.94□□□□□ -0.34
ACTN1-201ENST00000193403 SLFN14P0C7P3 912 aa12.94□□□□□ -0.34
ACTN1-201ENST00000193403 SYKP43405 635 aa12.94□□□□□ -0.34
ACTN1-201ENST00000193403 LMBR1LQ6UX01 489 aa12.94□□□□□ -0.34
ACTN1-201ENST00000193403 CCDC102AQ96A19 550 aa12.94□□□□□ -0.34
ACTN1-201ENST00000193403 ZCCHC17Q9NP64 241 aaKnown RBP12.94□□□□□ -0.34
ACTN1-201ENST00000193403 PUF60Q9UHX1 559 aaKnown RBP12.94□□□□□ -0.34
ACTN1-201ENST00000193403 CLIC4Q9Y696 253 aa12.94□□□□□ -0.34
ACTN1-201ENST00000193403 ZNF335Q9H4Z2 1342 aaPredicted RBP12.94□□□□□ -0.34
ACTN1-201ENST00000193403 PIK3C2BO00750 1634 aa12.93□□□□□ -0.34
ACTN1-201ENST00000193403 IQCB1Q15051 598 aa12.93□□□□□ -0.34
ACTN1-201ENST00000193403 DBNLQ9UJU6 430 aaKnown RBP12.93□□□□□ -0.34
ACTN1-201ENST00000193403 PLEKHG3A1L390 1219 aa12.93□□□□□ -0.34
ACTN1-201ENST00000193403 SETD1BQ9UPS6 1966 aaKnown RBP12.93□□□□□ -0.34
ACTN1-201ENST00000193403 CCP110O43303 1012 aa12.93□□□□□ -0.34
ACTN1-201ENST00000193403 TNNI3KQ59H18 835 aa12.93□□□□□ -0.34
ACTN1-201ENST00000193403 KRBA2Q6ZNG9 492 aa12.93□□□□□ -0.34
ACTN1-201ENST00000193403 GOLGA6L1Q8N7Z2 621 aa12.93□□□□□ -0.34
ACTN1-201ENST00000193403 CNNM3Q8NE01 707 aa12.93□□□□□ -0.34
ACTN1-201ENST00000193403 NSUN7Q8NE18 718 aaKnown RBP12.93□□□□□ -0.34
ACTN1-201ENST00000193403 LZTFL1Q9NQ48 299 aa12.93□□□□□ -0.34
ACTN1-201ENST00000193403 FPGT-TNNI3KV9GXZ4 949 aa12.93□□□□□ -0.34
ACTN1-201ENST00000193403 DHX16O60231 1041 aaKnown RBP12.92□□□□□ -0.34
ACTN1-201ENST00000193403 EVA1CP58658 441 aa12.92□□□□□ -0.34
ACTN1-201ENST00000193403 DESI2Q9BSY9 194 aa12.92□□□□□ -0.34
ACTN1-201ENST00000193403 CBFA2T2O43439 604 aa12.92□□□□□ -0.34
ACTN1-201ENST00000193403 ZNF202O95125 648 aa12.92□□□□□ -0.34
ACTN1-201ENST00000193403 ADAMTS2O95450 1211 aa12.92□□□□□ -0.34
ACTN1-201ENST00000193403 CCZ1BP86790 482 aa12.92□□□□□ -0.34
ACTN1-201ENST00000193403 CCZ1P86791 482 aaPredicted RBP12.92□□□□□ -0.34
ACTN1-201ENST00000193403 MORC2Q9Y6X9 1032 aaPredicted RBP12.92□□□□□ -0.34
ACTN1-201ENST00000193403 HSP90B2PQ58FF3 399 aa12.92□□□□□ -0.34
ACTN1-201ENST00000193403 TTC39AQ5SRH9 613 aa12.92□□□□□ -0.34
ACTN1-201ENST00000193403 AK7Q96M32 723 aa12.92□□□□□ -0.34
ACTN1-201ENST00000193403 KIAA1468Q9P260 1216 aa12.92□□□□□ -0.34
ACTN1-201ENST00000193403 USP6P35125 1406 aa12.91□□□□□ -0.34
ACTN1-201ENST00000193403 ZSCAN12O43309 604 aa12.91□□□□□ -0.34
ACTN1-201ENST00000193403 HMGB1P09429 215 aaKnown RBP12.91□□□□□ -0.34
ACTN1-201ENST00000193403 OAS2P29728 719 aaKnown RBP12.91□□□□□ -0.34
ACTN1-201ENST00000193403 LEKR1Q6ZMV7 388 aa12.91□□□□□ -0.34
ACTN1-201ENST00000193403 CCDC191Q8NCU4 936 aa12.91□□□□□ -0.34
ACTN1-201ENST00000193403 IFT172Q9UG01 1749 aa12.91□□□□□ -0.34
ACTN1-201ENST00000193403 A0A0G2JLW4 131 aa12.91□□□□□ -0.34
ACTN1-201ENST00000193403 KDM4FA0A1W2PPD8 638 aa12.91□□□□□ -0.34
ACTN1-201ENST00000193403 IMMTQ16891 758 aaKnown RBP12.91□□□□□ -0.34
ACTN1-201ENST00000193403 EPHA10Q5JZY3 1008 aa12.91□□□□□ -0.34
ACTN1-201ENST00000193403 KRT28Q7Z3Y7 464 aa12.91□□□□□ -0.34
ACTN1-201ENST00000193403 DHX40Q8IX18 779 aaKnown RBP12.91□□□□□ -0.34
ACTN1-201ENST00000193403 ARFGAP3Q9NP61 516 aa12.91□□□□□ -0.34
ACTN1-201ENST00000193403 HNRNPH2P55795 449 aaKnown RBP12.91□□□□□ -0.34
ACTN1-201ENST00000193403 FAM193AP78312 1265 aa12.91□□□□□ -0.34
ACTN1-201ENST00000193403 PDE4CQ08493 712 aa12.91□□□□□ -0.34
ACTN1-201ENST00000193403 ANKRD13DQ6ZTN6 518 aa12.91□□□□□ -0.34
ACTN1-201ENST00000193403 TRMT44Q8IYL2 757 aaKnown RBP12.91□□□□□ -0.34
ACTN1-201ENST00000193403 PAG1Q9NWQ8 432 aa12.91□□□□□ -0.34
ACTN1-201ENST00000193403 NEURL4Q96JN8 1562 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms