RNA–Protein interactions for RNA: ENST00000173898.11

TRO-201, Transcript of trophinin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRO, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-201ENST00000173898 GOPCQ9HD26 462 aa13.73□□□□□ -0.21
TRO-201ENST00000173898 KAT6BQ8WYB5 2073 aa13.73□□□□□ -0.21
TRO-201ENST00000173898 CABP5Q9NP86 173 aa13.73□□□□□ -0.21
TRO-201ENST00000173898 BCCIPQ9P287 314 aaKnown RBP eCLIP13.73□□□□□ -0.21
TRO-201ENST00000173898 YTHDC2Q9H6S0 1430 aaKnown RBP13.73□□□□□ -0.21
TRO-201ENST00000173898 EZRP15311 586 aaKnown RBP13.73□□□□□ -0.21
TRO-201ENST00000173898 RXRAP19793 462 aa13.73□□□□□ -0.21
TRO-201ENST00000173898 PTGS1P23219 599 aa13.73□□□□□ -0.21
TRO-201ENST00000173898 HEATR3Q7Z4Q2 680 aa13.73□□□□□ -0.21
TRO-201ENST00000173898 MIGA1Q8NAN2 632 aa13.73□□□□□ -0.21
TRO-201ENST00000173898 SETDB2Q96T68 719 aa13.73□□□□□ -0.21
TRO-201ENST00000173898 IRS4O14654 1257 aaPredicted RBP13.72□□□□□ -0.21
TRO-201ENST00000173898 HS1BP3Q53T59 392 aa13.72□□□□□ -0.21
TRO-201ENST00000173898 DZIP3Q86Y13 1208 aaKnown RBP13.72□□□□□ -0.21
TRO-201ENST00000173898 SPAG5Q96R06 1193 aa13.72□□□□□ -0.21
TRO-201ENST00000173898 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.72□□□□□ -0.21
TRO-201ENST00000173898 UHRF1BP1Q6BDS2 1440 aa13.72□□□□□ -0.21
TRO-201ENST00000173898 PSMA7O14818 248 aa13.72□□□□□ -0.21
TRO-201ENST00000173898 IL2RBP14784 551 aa13.72□□□□□ -0.21
TRO-201ENST00000173898 LIG1P18858 919 aa13.72□□□□□ -0.21
TRO-201ENST00000173898 SIRT1Q96EB6 747 aa13.72□□□□□ -0.21
TRO-201ENST00000173898 LRRC27Q9C0I9 530 aa13.72□□□□□ -0.21
TRO-201ENST00000173898 RNF123Q5XPI4 1314 aa13.72□□□□□ -0.21
TRO-201ENST00000173898 EIF2AK4Q9P2K8 1649 aaKnown RBP13.72□□□□□ -0.21
TRO-201ENST00000173898 GSTO1P78417 241 aa13.72□□□□□ -0.21
TRO-201ENST00000173898 MAPK8IP2Q13387 824 aaPredicted RBP13.72□□□□□ -0.21
TRO-201ENST00000173898 PPP4R3AQ6IN85 833 aa13.72□□□□□ -0.21
TRO-201ENST00000173898 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.72□□□□□ -0.21
TRO-201ENST00000173898 V9GYY5 206 aaPredicted RBP13.72□□□□□ -0.21
TRO-201ENST00000173898 WDR78Q5VTH9 848 aa13.71□□□□□ -0.21
TRO-201ENST00000173898 EHBP1Q8NDI1 1231 aa13.71□□□□□ -0.21
TRO-201ENST00000173898 EHMT1Q9H9B1 1298 aa13.71□□□□□ -0.21
TRO-201ENST00000173898 IBSPP21815 317 aaPredicted RBP13.71□□□□□ -0.21
TRO-201ENST00000173898 MAP2K1Q02750 393 aaPredicted RBP13.71□□□□□ -0.21
TRO-201ENST00000173898 CTR9Q6PD62 1173 aa13.71□□□□□ -0.21
TRO-201ENST00000173898 SYCP3Q8IZU3 236 aa13.71□□□□□ -0.21
TRO-201ENST00000173898 KLHDC4Q8TBB5 520 aa13.71□□□□□ -0.21
TRO-201ENST00000173898 CALCOCO1Q9P1Z2 691 aa13.71□□□□□ -0.21
TRO-201ENST00000173898 SAMM50Q9Y512 469 aa13.71□□□□□ -0.21
TRO-201ENST00000173898 WDR7Q9Y4E6 1490 aa13.71□□□□□ -0.21
TRO-201ENST00000173898 CYLC1P35663 651 aaPredicted RBP13.71□□□□□ -0.21
TRO-201ENST00000173898 SCLT1Q96NL6 688 aa13.71□□□□□ -0.21
TRO-201ENST00000173898 UTP14AQ9BVJ6 771 aaKnown RBP13.71□□□□□ -0.21
TRO-201ENST00000173898 ABCC10Q5T3U5 1492 aa13.71□□□□□ -0.21
TRO-201ENST00000173898 CHMP4BP1P59074 171 aa13.71□□□□□ -0.22
TRO-201ENST00000173898 FAM173BQ6P4H8 233 aa13.71□□□□□ -0.22
TRO-201ENST00000173898 C19orf44Q9H6X5 657 aa13.71□□□□□ -0.22
TRO-201ENST00000173898 SHANK2Q9UPX8 1470 aa13.7□□□□□ -0.22
TRO-201ENST00000173898 MAGEB6P1A0A0J9YX57 407 aa13.7□□□□□ -0.22
TRO-201ENST00000173898 PNMA6EA0A0J9YXQ4 647 aa13.7□□□□□ -0.22
TRO-201ENST00000173898 LMAN1P49257 510 aa13.7□□□□□ -0.22
TRO-201ENST00000173898 STX17P56962 302 aa13.7□□□□□ -0.22
TRO-201ENST00000173898 ASIC1P78348 528 aa13.7□□□□□ -0.22
TRO-201ENST00000173898 STXBP4Q6ZWJ1 553 aa13.7□□□□□ -0.22
TRO-201ENST00000173898 BRAPQ7Z569 592 aa13.7□□□□□ -0.22
TRO-201ENST00000173898 MAGEB6Q8N7X4 407 aa13.7□□□□□ -0.22
TRO-201ENST00000173898 ARFGAP3Q9NP61 516 aa13.7□□□□□ -0.22
TRO-201ENST00000173898 DBNDD2Q9BQY9 259 aa13.7□□□□□ -0.22
TRO-201ENST00000173898 IFNKQ9P0W0 207 aa13.7□□□□□ -0.22
TRO-201ENST00000173898 TBCAO75347 108 aaKnown RBP13.7□□□□□ -0.22
TRO-201ENST00000173898 RBSNQ9H1K0 784 aa13.7□□□□□ -0.22
TRO-201ENST00000173898 A0A1B0GVL5 298 aa13.7□□□□□ -0.22
TRO-201ENST00000173898 F8W031 263 aaPredicted RBP13.7□□□□□ -0.22
TRO-201ENST00000173898 SGSM2O43147 1006 aa13.7□□□□□ -0.22
TRO-201ENST00000173898 NAPAP54920 295 aa13.7□□□□□ -0.22
TRO-201ENST00000173898 ZNF790Q6PG37 636 aa13.7□□□□□ -0.22
TRO-201ENST00000173898 CCDC129Q6ZRS4 1044 aa13.7□□□□□ -0.22
TRO-201ENST00000173898 KRT222Q8N1A0 295 aa13.7□□□□□ -0.22
TRO-201ENST00000173898 ZNF622Q969S3 477 aaKnown RBP eCLIP13.7□□□□□ -0.22
TRO-201ENST00000173898 FAM89AQ96GI7 184 aa13.7□□□□□ -0.22
TRO-201ENST00000173898 WDR62O43379 1518 aa13.69□□□□□ -0.22
TRO-201ENST00000173898 CTAGE15A4D2H0 777 aa13.69□□□□□ -0.22
TRO-201ENST00000173898 CTAGE8P0CG41 777 aa13.69□□□□□ -0.22
TRO-201ENST00000173898 GNAT2P19087 354 aa13.69□□□□□ -0.22
TRO-201ENST00000173898 DDB1Q16531 1140 aa13.69□□□□□ -0.22
TRO-201ENST00000173898 CTAGE6Q86UF2 777 aa13.69□□□□□ -0.22
TRO-201ENST00000173898 CTAGE4Q8IX94 777 aa13.69□□□□□ -0.22
TRO-201ENST00000173898 DRC1Q96MC2 740 aa13.69□□□□□ -0.22
TRO-201ENST00000173898 SLU7O95391 586 aaKnown RBP13.69□□□□□ -0.22
TRO-201ENST00000173898 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.69□□□□□ -0.22
TRO-201ENST00000173898 CALML3P27482 149 aa13.69□□□□□ -0.22
TRO-201ENST00000173898 MCM6Q14566 821 aa13.69□□□□□ -0.22
TRO-201ENST00000173898 MCM9Q9NXL9 1143 aa13.69□□□□□ -0.22
TRO-201ENST00000173898 ZHX1Q9UKY1 873 aaPredicted RBP13.69□□□□□ -0.22
TRO-201ENST00000173898 TBX22Q9Y458 520 aa13.69□□□□□ -0.22
TRO-201ENST00000173898 A0A1B0GUL7 405 aa13.68□□□□□ -0.22
TRO-201ENST00000173898 NEBLO76041 1014 aa13.68□□□□□ -0.22
TRO-201ENST00000173898 LGR6Q9HBX8 967 aa13.68□□□□□ -0.22
TRO-201ENST00000173898 SNX14Q9Y5W7 946 aa13.68□□□□□ -0.22
TRO-201ENST00000173898 EYA2O00167 538 aa13.68□□□□□ -0.22
TRO-201ENST00000173898 CCDC175P0C221 793 aa13.68□□□□□ -0.22
TRO-201ENST00000173898 FAM227BQ96M60 508 aa13.68□□□□□ -0.22
TRO-201ENST00000173898 TAOK3Q9H2K8 898 aa13.68□□□□□ -0.22
TRO-201ENST00000173898 DTNBO60941 627 aa13.68□□□□□ -0.22
TRO-201ENST00000173898 CALM1P0DP23 149 aa13.68□□□□□ -0.22
TRO-201ENST00000173898 CALM2P0DP24 149 aa13.68□□□□□ -0.22
TRO-201ENST00000173898 CALM3P0DP25 149 aa13.68□□□□□ -0.22
TRO-201ENST00000173898 RPS6KB1P23443 525 aa13.68□□□□□ -0.22
TRO-201ENST00000173898 ERMNQ8TAM6 284 aa13.68□□□□□ -0.22
TRO-201ENST00000173898 MMRN2Q9H8L6 949 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms