RNA–Protein interactions for RNA: ENSMUST00000210774.1

Ebf3-208, Transcript of Transcription factor COE3, mousemouse

TSL 1 (best) BASIC

Gene Ebf3, Length 2,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-208ENSMUST00000210774 Mical1Q8VDP3 1048 aa17.03■□□□□ 0.32
Ebf3-208ENSMUST00000210774 Hps3Q91VB4 1002 aa17.03■□□□□ 0.32
Ebf3-208ENSMUST00000210774 Dnai2A2AC93 623 aa17.03■□□□□ 0.32
Ebf3-208ENSMUST00000210774 Psmb7P70195 277 aa17.03■□□□□ 0.32
Ebf3-208ENSMUST00000210774 Bicdl2Q8CHW5 507 aa17.03■□□□□ 0.32
Ebf3-208ENSMUST00000210774 LtkP08923 888 aa17.02■□□□□ 0.32
Ebf3-208ENSMUST00000210774 Rrp1P56183 494 aaKnown RBP17.02■□□□□ 0.32
Ebf3-208ENSMUST00000210774 Kcnd1Q03719 651 aa17.02■□□□□ 0.32
Ebf3-208ENSMUST00000210774 GphnQ8BUV3 769 aaKnown RBP17.02■□□□□ 0.32
Ebf3-208ENSMUST00000210774 Ccdc12Q8R344 166 aaKnown RBP17.02■□□□□ 0.32
Ebf3-208ENSMUST00000210774 Sh3bp5Q9Z131 463 aa17.02■□□□□ 0.32
Ebf3-208ENSMUST00000210774 Usp32F8VPZ3 1604 aa17.02■□□□□ 0.32
Ebf3-208ENSMUST00000210774 Rgs12Q8CGE9 1381 aa17.02■□□□□ 0.32
Ebf3-208ENSMUST00000210774 EmbP21995 330 aa17.02■□□□□ 0.31
Ebf3-208ENSMUST00000210774 HrQ61645 1182 aa17.02■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Idi2Q8BFZ6 227 aa17.02■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Tmem87aQ8BXN9 555 aa17.02■□□□□ 0.31
Ebf3-208ENSMUST00000210774 PdiltQ9DAN1 588 aa17.02■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Tlr7P58681 1050 aa17.01■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Cct5P80316 541 aaKnown RBP17.01■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Ppp1r7Q3UM45 361 aa17.01■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Npdc1Q64322 332 aa17.01■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Tmem132eQ6IEE6 982 aa17.01■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Ppp2r2cQ8BG02 447 aa17.01■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Il1rapl2Q9ERS6 686 aa17.01■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Ap1g2O88512 791 aa17.01■□□□□ 0.31
Ebf3-208ENSMUST00000210774 GmnnO88513 206 aa17.01■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Mdh1P14152 334 aa17.01■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Map3k13Q1HKZ5 959 aa17.01■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Map3k11Q80XI6 850 aa17.01■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Ccdc112A0AUP1 442 aa17.01■□□□□ 0.31
Ebf3-208ENSMUST00000210774 C2cd2E9Q3C1 696 aa17.01■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Gm10563F6WIE4 79 aa17.01■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Sp8Q8BMJ8 486 aa17.01■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Mtmr6Q8VE11 617 aa17.01■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Rsrc2A2RTL5 376 aaKnown RBP17■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Kcnb2A6H8H5 907 aa17■□□□□ 0.31
Ebf3-208ENSMUST00000210774 TxlnaQ6PAM1 554 aaKnown RBP17■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Slc35g1Q8BY79 368 aa17■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Brms1Q99N20 246 aa17■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Kif20bQ80WE4 1774 aaKnown RBP17■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Smarcc1P97496 1104 aa16.99■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Ddx49Q4FZF3 480 aaKnown RBP16.99■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Jakmip3Q5DTN8 844 aa16.99■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Hpcal4Q8BGZ1 191 aa16.99■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Edc3Q8K2D3 508 aaKnown RBP16.99■□□□□ 0.31
Ebf3-208ENSMUST00000210774 KynuQ9CXF0 464 aa16.99■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Fut8Q9WTS2 575 aa16.99■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Tmem94Q7TSH8 1360 aa16.99■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Cct2P80314 535 aaKnown RBP16.99■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Znhit6Q3UFB2 460 aaKnown RBP16.99■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Dpf2Q61103 391 aaKnown RBP16.99■□□□□ 0.31
Ebf3-208ENSMUST00000210774 PsapQ61207 557 aaKnown RBP16.99■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Itga6Q61739 1091 aa16.99■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Ddx11Q6AXC6 880 aa16.99■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Nrxn3Q6P9K9 1571 aa16.99■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Irx1P81068 480 aa16.98■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Trerf1Q8BXJ2 1205 aa16.98■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Cct8l1Q80YT3 562 aa16.98■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Aox2Q5SGK3 1345 aa16.98■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Als2Q920R0 1651 aa16.98■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Pa2g4P50580 394 aaKnown RBP16.98■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Tmem109Q3UBX0 243 aa16.98■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Sirt1Q923E4 737 aa16.98■□□□□ 0.31
Ebf3-208ENSMUST00000210774 AceP09470 1312 aa16.97■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Tnrc6bQ8BKI2 1810 aaKnown RBP16.97■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Znf541Q0GGX2 1363 aa16.97■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Trim30cD3YVI9 513 aa16.97■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Ier5O89113 308 aa16.97■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Smc2Q8CG48 1191 aaKnown RBP16.97■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Synpo2Q91YE8 1087 aaKnown RBP16.97■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Mon2Q80TL7 1715 aa16.97■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Stat1P42225 749 aa16.97■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Atp6v1aP50516 617 aaKnown RBP16.97■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Rps6kb1Q8BSK8 525 aa16.97■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Q8C1R3 189 aa16.97■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Mtmr3Q8K296 1196 aa16.97■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Msh6P54276 1358 aaKnown RBP16.97■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Eif5P59325 429 aaKnown RBP16.96■□□□□ 0.31
Ebf3-208ENSMUST00000210774 TmpoQ61033 693 aaKnown RBP16.96■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Lamb3Q61087 1168 aa16.96■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Lrrc1Q80VQ1 524 aa16.96■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Eif3cQ8R1B4 911 aaKnown RBP16.96■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Kank3Q9Z1P7 791 aa16.96■□□□□ 0.31
Ebf3-208ENSMUST00000210774 N4bp2F8VQG7 1678 aaKnown RBP16.96■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Mdm2P23804 489 aa16.96■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Cep63Q3UPP8 700 aa16.96■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Zrsr2Q62377 462 aaKnown RBP16.96■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Ccdc73Q8CDM4 1066 aa16.96■□□□□ 0.31
Ebf3-208ENSMUST00000210774 C5P06684 1680 aa16.96■□□□□ 0.31
Ebf3-208ENSMUST00000210774 Vsnl1P62761 191 aa16.95■□□□□ 0.3
Ebf3-208ENSMUST00000210774 Ccdc40Q8BI79 1192 aa16.95■□□□□ 0.3
Ebf3-208ENSMUST00000210774 Rreb1Q3UH06 1700 aaKnown RBP16.95■□□□□ 0.3
Ebf3-208ENSMUST00000210774 Specc1lQ2KN98 1118 aaKnown RBP16.95■□□□□ 0.3
Ebf3-208ENSMUST00000210774 Chpf2Q3UU43 768 aa16.95■□□□□ 0.3
Ebf3-208ENSMUST00000210774 Ccdc114Q3UX62 658 aa16.95■□□□□ 0.3
Ebf3-208ENSMUST00000210774 MmeQ61391 750 aa16.95■□□□□ 0.3
Ebf3-208ENSMUST00000210774 Ovgp1Q62010 721 aa16.95■□□□□ 0.3
Ebf3-208ENSMUST00000210774 Q8C5K5 320 aa16.95■□□□□ 0.3
Ebf3-208ENSMUST00000210774 Atf7Q8R0S1 413 aa16.95■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 16.6 ms