RNA–Protein interactions for RNA: ENSMUST00000126429.7

Ccdc171-204, Transcript of Coiled-coil domain-containing protein 171, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc171, Length 1,388 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc171-204ENSMUST00000126429 AU019823E9PUQ3 292 aa17.33■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Gsdma2Q32M21 443 aa17.33■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Tor1aip2Q8BYU6 502 aa17.33■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Kdm3aQ6PCM1 1323 aa17.33■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Psmd14O35593 310 aa17.32■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Terf1P70371 421 aa17.32■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Nell2Q61220 819 aa17.32■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Ccdc93Q7TQK5 629 aa17.32■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Cluap1Q8R3P7 413 aa17.32■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 HnrnpuQ8VEK3 800 aaKnown RBP17.32■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Fam84aQ9D650 292 aa17.32■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Irs4Q9Z0Y7 1216 aa17.32■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Kcnh8P59111 1102 aa17.31■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Sept9Q80UG5 583 aa17.31■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Slc44a4Q91VA1 707 aa17.31■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Tnnt3Q9QZ47 272 aa17.31■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Znfx1Q8R151 1909 aaKnown RBP17.31■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Scn11aQ9R053 1765 aa17.3■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Kifc2O08672 792 aa17.3■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Tom1l2Q5SRX1 507 aa17.3■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Kiaa0753Q6A000 959 aa17.3■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Ift57Q8BXG3 429 aa17.3■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Klf15Q9EPW2 415 aa17.3■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Mbd3Q9Z2D8 285 aaKnown RBP17.3■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Trpm7Q923J1 1863 aa17.3■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 AampJ3QN89 436 aa17.29■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 TsksO54887 585 aa17.29■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Slc4a1P04919 929 aa17.29■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Gm2163Q6PCY5 473 aa17.29■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Asap2Q7SIG6 958 aa17.29■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Ptrh1Q8BW00 204 aa17.29■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Smarca5Q91ZW3 1051 aaKnown RBP17.29■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Gtf2iQ9ESZ8 998 aaKnown RBP17.29■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Col1a1P11087 1453 aa17.29■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Csrnp3P59055 597 aa17.28■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 GmpsQ3THK7 693 aa17.28■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 EspnlQ3UYR4 1005 aa17.28■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Gm5592Q3V0A6 857 aa17.28■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Ubxn2aQ99KJ0 258 aa17.28■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Rgs19Q9CX84 216 aa17.28■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Cfap44E9Q5M6 1843 aa17.28■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Nup98Q6PFD9 1816 aaKnown RBP17.28■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Bach1P97302 739 aa17.28■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Fam83bQ0VBM2 1012 aa17.28■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Tbc1d32Q3URV1 1296 aa17.28■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 DbnlQ62418 436 aa17.28■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Mxd3Q80US8 206 aa17.28■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Znf18Q810A1 556 aa17.28■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 FanclQ9CR14 375 aa17.28■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Letm1Q9Z2I0 738 aa17.28■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Mast3Q3U214 1321 aa17.27■□□□□ 0.36
Ccdc171-204ENSMUST00000126429 Ddx31Q6NZQ2 687 aaKnown RBP17.27■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 Armcx1Q9CX83 456 aa17.27■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 Atg4a-psA0A0G2JFS9 396 aa17.26■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 GabreA2AMW3 916 aa17.26■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 Atg4aQ8C9S8 396 aa17.26■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 Trmt44Q9D2Q2 713 aa17.26■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 Lama2Q60675 3118 aaKnown RBP17.25■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 Llgl2Q3TJ91 1027 aa17.25■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 Scaf8Q6DID3 1268 aa17.25■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 Slc26a8Q8R0C3 999 aa17.25■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 Bag3Q9JLV1 577 aaKnown RBP17.25■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 NeflP08551 543 aa17.24■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 Spg7Q3ULF4 781 aa17.24■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 Zbtb45Q52KG4 520 aa17.24■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 HdlbpQ8VDJ3 1268 aaKnown RBP17.24■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 Glrx3Q9CQM9 337 aa17.24■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 Tnip1Q9WUU8 647 aa17.24■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 Usp34Q6ZQ93 3582 aa17.23■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 A0A1W2P7S8 802 aa17.23■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 Izumo3A6PWV3 263 aa17.23■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 Mapkapk5O54992 473 aa17.23■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 Rps12P63323 132 aaKnown RBP17.23■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 Large2Q5XPT3 690 aa17.23■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 Nlrp9aQ66X03 949 aa17.23■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 Cdc5lQ6A068 802 aaKnown RBP17.23■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 Sf3a1Q8K4Z5 791 aaKnown RBP17.23■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 Rbbp6P97868 1790 aaKnown RBP17.22■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 Ifi207E9Q3L4 978 aa17.22■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 Mctp2Q5RJH2 878 aa17.22■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 Pram1Q6BCL1 675 aa17.22■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 Rbm15bQ6PHZ5 887 aaKnown RBP17.22■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 Abtb2Q7TQI7 1024 aa17.22■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 Tmem67Q8BR76 992 aa17.22■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 Tmem266Q8BZB3 538 aa17.22■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 CarsQ9ER72 831 aaKnown RBP17.22■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 NynrinQ5DTZ0 1840 aa17.22■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 Mical3Q8CJ19 1993 aa17.21■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 D1Pas1P16381 660 aa17.21■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 Znf692Q3U381 531 aa17.21■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 Polr3dQ91WD1 398 aa17.21■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 Dpp7Q9ET22 506 aa17.21■□□□□ 0.35
Ccdc171-204ENSMUST00000126429 CpdO89001 1377 aa17.21■□□□□ 0.34
Ccdc171-204ENSMUST00000126429 Prl3d1P18121 224 aa17.2■□□□□ 0.34
Ccdc171-204ENSMUST00000126429 Fam228bQ497Q6 232 aa17.2■□□□□ 0.34
Ccdc171-204ENSMUST00000126429 Cnot7Q60809 285 aa17.2■□□□□ 0.34
Ccdc171-204ENSMUST00000126429 Shtn1Q8K2Q9 631 aa17.2■□□□□ 0.34
Ccdc171-204ENSMUST00000126429 Eif2s2Q99L45 331 aaKnown RBP17.2■□□□□ 0.34
Ccdc171-204ENSMUST00000126429 Stag1Q9D3E6 1258 aa17.2■□□□□ 0.34
Ccdc171-204ENSMUST00000126429 Pappa2E9PZ87 1789 aa17.2■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 48.5 ms