RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 P3h4Q8K2B0 443 aa20.63■□□□□ 0.89
Trim71-201ENSMUST00000111816 St13Q99L47 371 aaKnown RBP20.62■□□□□ 0.89
Trim71-201ENSMUST00000111816 Parp10Q8CIE4 960 aa20.62■□□□□ 0.89
Trim71-201ENSMUST00000111816 Mphosph6Q9D1Q1 161 aa20.62■□□□□ 0.89
Trim71-201ENSMUST00000111816 Stat2Q9WVL2 923 aa20.62■□□□□ 0.89
Trim71-201ENSMUST00000111816 Kdm3aQ6PCM1 1323 aa20.62■□□□□ 0.89
Trim71-201ENSMUST00000111816 Dapk3O54784 448 aa20.62■□□□□ 0.89
Trim71-201ENSMUST00000111816 Nlrp3Q8R4B8 1033 aa20.62■□□□□ 0.89
Trim71-201ENSMUST00000111816 Cdk5rap3Q99LM2 503 aa20.62■□□□□ 0.89
Trim71-201ENSMUST00000111816 MmeQ61391 750 aa20.61■□□□□ 0.89
Trim71-201ENSMUST00000111816 GopcQ8BH60 463 aa20.61■□□□□ 0.89
Trim71-201ENSMUST00000111816 Cttnbp2B9EJA2 1648 aa20.61■□□□□ 0.89
Trim71-201ENSMUST00000111816 Ccdc88bQ4QRL3 1481 aa20.61■□□□□ 0.89
Trim71-201ENSMUST00000111816 Krt20Q9D312 431 aa20.61■□□□□ 0.89
Trim71-201ENSMUST00000111816 Pacsin2Q9WVE8 486 aaKnown RBP20.61■□□□□ 0.89
Trim71-201ENSMUST00000111816 Fsip1Q9D3V5 435 aa20.61■□□□□ 0.89
Trim71-201ENSMUST00000111816 Tmem87aQ8BXN9 555 aa20.61■□□□□ 0.89
Trim71-201ENSMUST00000111816 Rap1gds1E9Q912 607 aa20.61■□□□□ 0.89
Trim71-201ENSMUST00000111816 Tsr2Q8C8T8 191 aa20.61■□□□□ 0.89
Trim71-201ENSMUST00000111816 Q9D5Q8 446 aa20.61■□□□□ 0.89
Trim71-201ENSMUST00000111816 1700122O11RikJ3QPW6 241 aa20.61■□□□□ 0.89
Trim71-201ENSMUST00000111816 Mctp2Q5RJH2 878 aa20.61■□□□□ 0.89
Trim71-201ENSMUST00000111816 Efhd1Q9D4J1 240 aa20.61■□□□□ 0.89
Trim71-201ENSMUST00000111816 Ccdc13D3YV10 709 aa20.61■□□□□ 0.89
Trim71-201ENSMUST00000111816 Q3TYL0 343 aa20.6■□□□□ 0.89
Trim71-201ENSMUST00000111816 Gm28043E0CXC2 719 aa20.6■□□□□ 0.89
Trim71-201ENSMUST00000111816 Snx25Q3ZT31 840 aa20.6■□□□□ 0.89
Trim71-201ENSMUST00000111816 Chd1lQ9CXF7 900 aa20.6■□□□□ 0.89
Trim71-201ENSMUST00000111816 Syt10Q9R0N4 523 aa20.6■□□□□ 0.89
Trim71-201ENSMUST00000111816 Rasa1E9PYG6 1038 aa20.6■□□□□ 0.89
Trim71-201ENSMUST00000111816 Ppp1r9aH3BJD6 1292 aa20.6■□□□□ 0.89
Trim71-201ENSMUST00000111816 Gm1604bQ3TRG0 118 aa20.6■□□□□ 0.89
Trim71-201ENSMUST00000111816 Slc26a8Q8R0C3 999 aa20.6■□□□□ 0.89
Trim71-201ENSMUST00000111816 Atf7Q8R0S1 413 aa20.6■□□□□ 0.89
Trim71-201ENSMUST00000111816 Zbtb22Q9Z0G7 638 aa20.6■□□□□ 0.89
Trim71-201ENSMUST00000111816 Atp2b1G5E829 1220 aa20.6■□□□□ 0.89
Trim71-201ENSMUST00000111816 Ces1aE9PYP1 563 aa20.59■□□□□ 0.89
Trim71-201ENSMUST00000111816 Terf2O35144 541 aa20.59■□□□□ 0.89
Trim71-201ENSMUST00000111816 Krt13P08730 437 aa20.59■□□□□ 0.89
Trim71-201ENSMUST00000111816 Mcm10Q0VBD2 885 aa20.59■□□□□ 0.89
Trim71-201ENSMUST00000111816 Btbd11Q6GQW0 1109 aa20.59■□□□□ 0.89
Trim71-201ENSMUST00000111816 Rad50P70388 1312 aa20.59■□□□□ 0.89
Trim71-201ENSMUST00000111816 Pde6cQ91ZQ1 861 aa20.59■□□□□ 0.89
Trim71-201ENSMUST00000111816 Svs3aF2Z472 265 aa20.59■□□□□ 0.89
Trim71-201ENSMUST00000111816 Atp8b3Q6UQ17 1335 aa20.59■□□□□ 0.89
Trim71-201ENSMUST00000111816 Cc2d2aQ8CFW7 1633 aa20.58■□□□□ 0.89
Trim71-201ENSMUST00000111816 EsrrgP62509 458 aa20.58■□□□□ 0.89
Trim71-201ENSMUST00000111816 HellsQ60848 821 aa20.58■□□□□ 0.89
Trim71-201ENSMUST00000111816 Ccdc113Q8C5T8 377 aa20.58■□□□□ 0.89
Trim71-201ENSMUST00000111816 Tekt2Q922G7 430 aa20.58■□□□□ 0.89
Trim71-201ENSMUST00000111816 Fmnl1Q9JL26 1094 aa20.58■□□□□ 0.89
Trim71-201ENSMUST00000111816 Pck1Q9Z2V4 622 aa20.58■□□□□ 0.89
Trim71-201ENSMUST00000111816 Tacc2Q9JJG0 1149 aa20.58■□□□□ 0.89
Trim71-201ENSMUST00000111816 Usp5P56399 858 aaKnown RBP20.58■□□□□ 0.88
Trim71-201ENSMUST00000111816 SyncQ9EPM5 470 aa20.58■□□□□ 0.88
Trim71-201ENSMUST00000111816 Exoc3l2D3YUP5 789 aa20.58■□□□□ 0.88
Trim71-201ENSMUST00000111816 Ppp1r14cQ8R4S0 164 aa20.58■□□□□ 0.88
Trim71-201ENSMUST00000111816 Kifap3P70188 793 aa20.58■□□□□ 0.88
Trim71-201ENSMUST00000111816 Cyp4f39Q8BGU0 532 aa20.58■□□□□ 0.88
Trim71-201ENSMUST00000111816 Trim16Q99PP9 556 aa20.58■□□□□ 0.88
Trim71-201ENSMUST00000111816 Drc3Q9D5E4 523 aa20.58■□□□□ 0.88
Trim71-201ENSMUST00000111816 Tshz2Q68FE9 1030 aa20.58■□□□□ 0.88
Trim71-201ENSMUST00000111816 Map3k13Q1HKZ5 959 aa20.57■□□□□ 0.88
Trim71-201ENSMUST00000111816 Tcp11l1Q8BTG3 509 aa20.57■□□□□ 0.88
Trim71-201ENSMUST00000111816 Myo1bP46735 1107 aa20.57■□□□□ 0.88
Trim71-201ENSMUST00000111816 1700013H16RikQ9DAC5 291 aa20.57■□□□□ 0.88
Trim71-201ENSMUST00000111816 AmfrQ9R049 643 aa20.57■□□□□ 0.88
Trim71-201ENSMUST00000111816 Nrbf2Q8VCQ3 287 aa20.57■□□□□ 0.88
Trim71-201ENSMUST00000111816 Metap2O08663 478 aaKnown RBP20.57■□□□□ 0.88
Trim71-201ENSMUST00000111816 Tshz1Q5DTH5 1084 aa20.57■□□□□ 0.88
Trim71-201ENSMUST00000111816 Tsnaxip1Q99P25 704 aa20.57■□□□□ 0.88
Trim71-201ENSMUST00000111816 Gm6657A0A1B0GRJ3 277 aa20.57■□□□□ 0.88
Trim71-201ENSMUST00000111816 Pik3r4Q8VD65 1358 aa20.56■□□□□ 0.88
Trim71-201ENSMUST00000111816 Ccpg1Q640L3 753 aa20.56■□□□□ 0.88
Trim71-201ENSMUST00000111816 Asic3Q6X1Y6 530 aa20.56■□□□□ 0.88
Trim71-201ENSMUST00000111816 Jade3Q6IE82 823 aa20.56■□□□□ 0.88
Trim71-201ENSMUST00000111816 Pcdhb2Q91Y00 799 aa20.56■□□□□ 0.88
Trim71-201ENSMUST00000111816 Exoc6bA6H5Z3 810 aa20.56■□□□□ 0.88
Trim71-201ENSMUST00000111816 Oas2E9Q9A9 742 aa20.56■□□□□ 0.88
Trim71-201ENSMUST00000111816 Tpd52l2Q9CYZ2 220 aaKnown RBP20.56■□□□□ 0.88
Trim71-201ENSMUST00000111816 PhexP70669 749 aa20.56■□□□□ 0.88
Trim71-201ENSMUST00000111816 Capza3P70190 299 aa20.55■□□□□ 0.88
Trim71-201ENSMUST00000111816 P4ha1Q60715 534 aa20.55■□□□□ 0.88
Trim71-201ENSMUST00000111816 Rabep2Q91WG2 554 aa20.55■□□□□ 0.88
Trim71-201ENSMUST00000111816 Eef2P58252 858 aaKnown RBP20.55■□□□□ 0.88
Trim71-201ENSMUST00000111816 Amotl1Q9D4H4 968 aa20.55■□□□□ 0.88
Trim71-201ENSMUST00000111816 Senp1P59110 640 aa20.55■□□□□ 0.88
Trim71-201ENSMUST00000111816 Lztfl1Q9JHQ5 299 aa20.55■□□□□ 0.88
Trim71-201ENSMUST00000111816 Tubgcp2Q921G8 905 aa20.54■□□□□ 0.88
Trim71-201ENSMUST00000111816 Dnaaf1Q9D2H9 634 aa20.54■□□□□ 0.88
Trim71-201ENSMUST00000111816 Diaph3Q9Z207 1171 aa20.54■□□□□ 0.88
Trim71-201ENSMUST00000111816 Irak4Q8R4K2 459 aa20.54■□□□□ 0.88
Trim71-201ENSMUST00000111816 Cdc37l1Q9CZP7 335 aa20.54■□□□□ 0.88
Trim71-201ENSMUST00000111816 Sh2b1Q91ZM2 756 aa20.54■□□□□ 0.88
Trim71-201ENSMUST00000111816 Faf1P54731 649 aa20.54■□□□□ 0.88
Trim71-201ENSMUST00000111816 Zbtb41Q811F1 908 aa20.54■□□□□ 0.88
Trim71-201ENSMUST00000111816 Cwc25Q9DBF7 416 aa20.54■□□□□ 0.88
Trim71-201ENSMUST00000111816 Map4k4P97820 1233 aaKnown RBP20.53■□□□□ 0.88
Trim71-201ENSMUST00000111816 Vps8Q0P5W1 1427 aa20.53■□□□□ 0.88
Trim71-201ENSMUST00000111816 Gngt1Q61012 74 aa20.53■□□□□ 0.88
Retrieved 100 of 22,080 RNA–protein pairs in 68.5 ms