RNA–Protein interactions for RNA: ENSMUST00000081654.12

Col18a1-202, Transcript of Collagen alpha-1(XVIII) chain, mousemouse

TSL 1 (best) BASIC

Gene Col18a1, Length 5,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1-202ENSMUST00000081654 Asic1Q6NXK8 526 aa18.58■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Frat2Q8K025 231 aa18.58■□□□□ 0.56
Col18a1-202ENSMUST00000081654 GmnnO88513 206 aa18.57■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Exoc1Q8R3S6 894 aa18.57■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Fam208aQ69ZR9 1610 aaKnown RBP18.57■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Snx13Q6PHS6 957 aa18.57■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Krt15Q61414 452 aa18.57■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Fermt2Q8CIB5 680 aa18.57■□□□□ 0.56
Col18a1-202ENSMUST00000081654 TrdnE9Q9K5 693 aa18.56■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Timm10P62073 90 aa18.56■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Klhl30Q8C3F7 581 aa18.56■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Ctnnbl1Q9CWL8 563 aaKnown RBP18.56■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Ncaph2Q8BSP2 607 aa18.56■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Gle1Q8R322 699 aa18.56■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Zfp853A0A1D5RM95 733 aa18.56■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Mybl2P48972 704 aa18.56■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Pcdhb22Q91XZ8 794 aa18.56■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Luc7l2Q7TNC4 392 aaKnown RBP18.56■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Terf2ipQ91VL8 393 aa18.56■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Scaf11E9PZM7 1456 aaKnown RBP18.55■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Zkscan16A2ALW2 728 aa18.55■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Ccdc82Q6PG04 518 aa18.55■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Tm6sf1P58749 370 aa18.55■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Atp8a2P98200 1148 aa18.55■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Ctnna2Q61301 953 aa18.55■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Ano8Q6PB70 1060 aa18.55■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Appbp2Q9DAX9 585 aa18.55■□□□□ 0.56
Col18a1-202ENSMUST00000081654 LratQ9JI60 231 aa18.55■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Tacc2Q9JJG0 1149 aa18.55■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Gng11P61953 73 aa18.54■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Nlrp2Q4PLS0 1046 aaKnown RBP18.54■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Trim28Q62318 834 aa18.54■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Rps6kb1Q8BSK8 525 aa18.54■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Snapc4Q8BP86 1333 aa18.54■□□□□ 0.56
Col18a1-202ENSMUST00000081654 MycbpapQ5SUV2 932 aa18.54■□□□□ 0.56
Col18a1-202ENSMUST00000081654 9230110C19RikQ8CC70 267 aa18.54■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Plekhg1F6S200 1446 aa18.54■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Tex14Q7M6U3 1450 aa18.54■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Eif4a1P60843 406 aaKnown RBP18.54■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Nap1l4Q78ZA7 375 aaKnown RBP18.54■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Cabp5Q9JLK3 173 aa18.54■□□□□ 0.56
Col18a1-202ENSMUST00000081654 AmfrQ9R049 643 aa18.54■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Gm18336A0A140LIU8 765 aa18.54■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Fam186bD3Z420 943 aa18.54■□□□□ 0.56
Col18a1-202ENSMUST00000081654 DesP31001 469 aaKnown RBP18.54■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Ercc3P49135 783 aa18.53■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Lmbrd2Q8C561 694 aa18.53■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Syce1Q9D495 329 aa18.53■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Prpf40aQ9R1C7 953 aaKnown RBP18.53■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Hmgb1P63158 215 aaKnown RBP18.53■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Asic4Q7TNS7 539 aa18.53■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Prdm11A2AGX3 565 aa18.53■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Cep135Q6P5D4 1140 aa18.53■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Ccdc12Q8R344 166 aaKnown RBP18.53■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Arhgef18Q6P9R4 1021 aa18.53■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Ccdc83Q9D4V3 305 aa18.53■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Tyro3P55144 880 aa18.52■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Mlh1Q9JK91 760 aa18.52■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Syt10Q9R0N4 523 aa18.52■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Utp18Q5SSI6 552 aaKnown RBP18.52■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Sik1Q60670 779 aa18.52■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Kank4Q6P9J5 1016 aa18.52■□□□□ 0.56
Col18a1-202ENSMUST00000081654 AlkP97793 1621 aa18.52■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Mx1P09922 631 aa18.52■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Gas8Q60779 478 aa18.52■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Fchsd1Q6PFY1 688 aa18.52■□□□□ 0.56
Col18a1-202ENSMUST00000081654 SnrkQ8VDU5 748 aa18.52■□□□□ 0.56
Col18a1-202ENSMUST00000081654 CpvlQ9D3S9 478 aa18.52■□□□□ 0.56
Col18a1-202ENSMUST00000081654 Spocd1B1ASB6 936 aa18.52■□□□□ 0.55
Col18a1-202ENSMUST00000081654 Fermt1P59113 677 aa18.52■□□□□ 0.55
Col18a1-202ENSMUST00000081654 Ccdc73Q8CDM4 1066 aa18.52■□□□□ 0.55
Col18a1-202ENSMUST00000081654 Dbndd1Q9CZ00 160 aa18.52■□□□□ 0.55
Col18a1-202ENSMUST00000081654 Acot9Q9R0X4 439 aaKnown RBP18.52■□□□□ 0.55
Col18a1-202ENSMUST00000081654 Nckap5lQ6GQX2 1323 aa18.52■□□□□ 0.55
Col18a1-202ENSMUST00000081654 Bloc1s4Q8VED2 215 aa18.51■□□□□ 0.55
Col18a1-202ENSMUST00000081654 2310002L09RikQ9D7L5 217 aa18.51■□□□□ 0.55
Col18a1-202ENSMUST00000081654 Gm30191A0A0U1RNT7 187 aa18.51■□□□□ 0.55
Col18a1-202ENSMUST00000081654 Prr16A3KMN5 304 aa18.51■□□□□ 0.55
Col18a1-202ENSMUST00000081654 Svs3aF2Z472 265 aa18.51■□□□□ 0.55
Col18a1-202ENSMUST00000081654 CltaO08585 235 aa18.51■□□□□ 0.55
Col18a1-202ENSMUST00000081654 LdhaP06151 332 aaKnown RBP18.51■□□□□ 0.55
Col18a1-202ENSMUST00000081654 Serpinc1P32261 465 aa18.51■□□□□ 0.55
Col18a1-202ENSMUST00000081654 Arhgef1Q61210 920 aaKnown RBP18.51■□□□□ 0.55
Col18a1-202ENSMUST00000081654 Acnat2Q8BGG9 420 aa18.51■□□□□ 0.55
Col18a1-202ENSMUST00000081654 Gtf3c5Q8R2T8 520 aa18.51■□□□□ 0.55
Col18a1-202ENSMUST00000081654 Ankrd40Q5SUE8 363 aa18.5■□□□□ 0.55
Col18a1-202ENSMUST00000081654 Gjc1P28229 396 aa18.5■□□□□ 0.55
Col18a1-202ENSMUST00000081654 Ncoa4Q5U4H9 625 aa18.5■□□□□ 0.55
Col18a1-202ENSMUST00000081654 Cyp4f39Q8BGU0 532 aa18.5■□□□□ 0.55
Col18a1-202ENSMUST00000081654 Smc1bQ920F6 1248 aa18.5■□□□□ 0.55
Col18a1-202ENSMUST00000081654 Gm29094F6Q785 221 aa18.5■□□□□ 0.55
Col18a1-202ENSMUST00000081654 Snap23O09044 210 aa18.5■□□□□ 0.55
Col18a1-202ENSMUST00000081654 Snx25Q3ZT31 840 aa18.5■□□□□ 0.55
Col18a1-202ENSMUST00000081654 Nlrp9aQ66X03 949 aa18.5■□□□□ 0.55
Col18a1-202ENSMUST00000081654 Plch2A2AP18 1501 aa18.5■□□□□ 0.55
Col18a1-202ENSMUST00000081654 Znf394Q9Z1D9 521 aa18.5■□□□□ 0.55
Col18a1-202ENSMUST00000081654 Ccdc42Q5SV66 316 aa18.49■□□□□ 0.55
Col18a1-202ENSMUST00000081654 Tubb4aQ9D6F9 444 aa18.49■□□□□ 0.55
Col18a1-202ENSMUST00000081654 Hs6st3Q9QYK4 470 aa18.49■□□□□ 0.55
Col18a1-202ENSMUST00000081654 Eif2ak4Q9QZ05 1648 aa18.49■□□□□ 0.55
Retrieved 100 of 22,080 RNA–protein pairs in 18.7 ms