RNA–Protein interactions for RNA: ENSMUST00000039021.10

Ssx2ip-201, Transcript of Afadin- and alpha-actinin-binding protein, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssx2ip, Length 3,410 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx2ip-201ENSMUST00000039021 Sec62Q8BU14 398 aaKnown RBP21.59■■□□□ 1.05
Ssx2ip-201ENSMUST00000039021 Krt25Q8VCW2 446 aa21.59■■□□□ 1.05
Ssx2ip-201ENSMUST00000039021 Ddx27Q921N6 760 aaKnown RBP21.59■■□□□ 1.05
Ssx2ip-201ENSMUST00000039021 Als2Q920R0 1651 aa21.59■■□□□ 1.05
Ssx2ip-201ENSMUST00000039021 Rgs9O54828 675 aa21.59■■□□□ 1.05
Ssx2ip-201ENSMUST00000039021 XpcP51612 930 aa21.59■■□□□ 1.05
Ssx2ip-201ENSMUST00000039021 Kiaa0753Q6A000 959 aa21.59■■□□□ 1.05
Ssx2ip-201ENSMUST00000039021 Vmn2r23E9PXI5 849 aa21.58■■□□□ 1.05
Ssx2ip-201ENSMUST00000039021 RubcnlQ3TD16 648 aa21.58■■□□□ 1.05
Ssx2ip-201ENSMUST00000039021 Zkscan4Q5SZT6 480 aa21.58■■□□□ 1.05
Ssx2ip-201ENSMUST00000039021 Atg9aQ68FE2 551 aa21.58■■□□□ 1.05
Ssx2ip-201ENSMUST00000039021 Dnaaf2Q8BPI1 814 aa21.58■■□□□ 1.05
Ssx2ip-201ENSMUST00000039021 Flad1Q8R123 492 aa21.58■■□□□ 1.05
Ssx2ip-201ENSMUST00000039021 Col4a3bpQ9EQG9 624 aa21.58■■□□□ 1.05
Ssx2ip-201ENSMUST00000039021 Taf3Q5HZG4 932 aa21.58■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Nol10Q5RJG1 687 aaKnown RBP21.58■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Acnat2Q8BGG9 420 aa21.58■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Snw1Q9CSN1 536 aaKnown RBP21.58■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 BccipQ9CWI3 316 aa21.58■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Zscan29E9Q5B4 869 aa21.57■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Clec11aO88200 328 aa21.57■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 LyarQ08288 388 aaKnown RBP21.57■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Cwc25Q9DBF7 416 aa21.57■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Frat2Q8K025 231 aa21.57■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Txnrd1Q9JMH6 613 aa21.57■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 TnksQ6PFX9 1320 aa21.56■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Zfp397Q7TNK4 527 aa21.56■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Q8BZJ8 459 aa21.56■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Tubb6Q922F4 447 aa21.56■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Mon2Q80TL7 1715 aa21.56■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Cers3Q1A3B0 383 aa21.56■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 DymQ8CHY3 669 aa21.56■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Tns3Q5SSZ5 1440 aa21.56■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Samsn1P57725 372 aa21.55■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Dhx40Q6PE54 779 aaKnown RBP21.55■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 RgmbQ7TQ33 436 aa21.55■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 BrapQ99MP8 591 aa21.55■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 NfkbibQ60778 359 aa21.55■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Lmod1Q8BVA4 595 aa21.55■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Tmc2Q8R4P4 888 aa21.55■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Bmp2kQ91Z96 1138 aa21.55■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Xpo4Q9ESJ0 1151 aa21.55■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Cplx1P63040 134 aa21.55■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 4930572O03RikQ8C5Y0 211 aa21.55■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Ltb4r2Q9JJL9 360 aa21.55■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Znf568E9PYI1 671 aa21.54■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Smarcc2Q6PDG5 1213 aa21.54■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Fsd2Q8BZ52 692 aa21.54■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Elf2Q9JHC9 593 aa21.54■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Zbtb40Q6PCS8 1258 aa21.54■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Cep55Q8BT07 462 aa21.54■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Sept12Q9D451 317 aa21.54■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Slc4a1P04919 929 aa21.54■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Cdk4P30285 303 aa21.54■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Rec8Q8C5S7 591 aa21.54■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Nfat5Q9WV30 1534 aa21.53■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Usp42B2RQC2 1324 aaKnown RBP21.53■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Acap3Q6NXL5 833 aa21.53■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Smc4Q8CG47 1286 aa21.53■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Ccne2Q9Z238 404 aa21.53■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Eya2O08575 532 aa21.53■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Gsdma2Q32M21 443 aa21.53■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Atf3Q60765 181 aa21.53■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Eif3bQ8JZQ9 803 aaKnown RBP21.53■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Sipa1l2Q80TE4 1722 aa21.53■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 TrdnE9Q9K5 693 aa21.52■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 MpndQ3TV65 487 aa21.52■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Rrp1P56183 494 aaKnown RBP21.52■■□□□ 1.04
Ssx2ip-201ENSMUST00000039021 Stxbp4Q9WV89 557 aa21.51■■□□□ 1.03
Ssx2ip-201ENSMUST00000039021 Simc1E9Q6E9 1354 aa21.51■■□□□ 1.03
Ssx2ip-201ENSMUST00000039021 Arap3Q8R5G7 1538 aa21.51■■□□□ 1.03
Ssx2ip-201ENSMUST00000039021 Exosc10P56960 887 aaKnown RBP21.51■■□□□ 1.03
Ssx2ip-201ENSMUST00000039021 Sptlc2P97363 560 aaKnown RBP21.51■■□□□ 1.03
Ssx2ip-201ENSMUST00000039021 Rbm33Q9CXK9 1231 aaKnown RBP21.51■■□□□ 1.03
Ssx2ip-201ENSMUST00000039021 Me1P06801 572 aa21.51■■□□□ 1.03
Ssx2ip-201ENSMUST00000039021 Dnm1P39053 867 aa21.51■■□□□ 1.03
Ssx2ip-201ENSMUST00000039021 Prpf4bQ61136 1007 aaKnown RBP21.51■■□□□ 1.03
Ssx2ip-201ENSMUST00000039021 Pip4k2bQ80XI4 416 aa21.51■■□□□ 1.03
Ssx2ip-201ENSMUST00000039021 Cnot6lQ8VEG6 555 aa21.51■■□□□ 1.03
Ssx2ip-201ENSMUST00000039021 Magi2Q9WVQ1 1275 aa21.51■■□□□ 1.03
Ssx2ip-201ENSMUST00000039021 Large1Q9Z1M7 756 aa21.51■■□□□ 1.03
Ssx2ip-201ENSMUST00000039021 Ppp4r3aQ6P2K6 820 aa21.5■■□□□ 1.03
Ssx2ip-201ENSMUST00000039021 Otud6bQ8K2H2 294 aa21.5■■□□□ 1.03
Ssx2ip-201ENSMUST00000039021 CenpqQ9CPQ5 267 aa21.5■■□□□ 1.03
Ssx2ip-201ENSMUST00000039021 Acot9Q9R0X4 439 aaKnown RBP21.5■■□□□ 1.03
Ssx2ip-201ENSMUST00000039021 Nlrp1aQ2LKU9 1182 aa21.49■■□□□ 1.03
Ssx2ip-201ENSMUST00000039021 VeztQ3ZK22 780 aa21.49■■□□□ 1.03
Ssx2ip-201ENSMUST00000039021 Znf653Q6YND2 615 aa21.49■■□□□ 1.03
Ssx2ip-201ENSMUST00000039021 Zfp202Q8C879 641 aa21.49■■□□□ 1.03
Ssx2ip-201ENSMUST00000039021 Tcof1O08784 1320 aaKnown RBP21.49■■□□□ 1.03
Ssx2ip-201ENSMUST00000039021 Emilin1Q99K41 1017 aa21.48■■□□□ 1.03
Ssx2ip-201ENSMUST00000039021 Atad2Q8CDM1 1040 aa21.48■■□□□ 1.03
Ssx2ip-201ENSMUST00000039021 Nfatc2ipO09130 412 aa21.48■■□□□ 1.03
Ssx2ip-201ENSMUST00000039021 Irx2P81066 474 aa21.48■■□□□ 1.03
Ssx2ip-201ENSMUST00000039021 Shisa4Q8CA71 197 aa21.48■■□□□ 1.03
Ssx2ip-201ENSMUST00000039021 Tmem59lQ7TNI2 337 aa21.47■■□□□ 1.03
Ssx2ip-201ENSMUST00000039021 Zkscan8Q8BSL0 588 aa21.47■■□□□ 1.03
Ssx2ip-201ENSMUST00000039021 CtifQ6PEE2 600 aaKnown RBP21.47■■□□□ 1.03
Ssx2ip-201ENSMUST00000039021 Mei4Q8BRM6 389 aa21.47■■□□□ 1.03
Ssx2ip-201ENSMUST00000039021 Dnajc14Q921R4 703 aa21.47■■□□□ 1.03
Retrieved 100 of 22,080 RNA–protein pairs in 46.5 ms