RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 A0A1W2P7S8 802 aa17.83■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Trim30dE9PWL0 497 aa17.83■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Nedd4P46935 887 aaKnown RBP17.83■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Ddx46Q569Z5 1032 aaKnown RBP17.83■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Cdc5lQ6A068 802 aaKnown RBP17.83■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Ltv1Q6NSQ7 470 aaKnown RBP17.83■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Ppp6r3Q922D4 844 aa17.83■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Nrxn2E9Q7X7 1710 aa17.83■□□□□ 0.44
Ercc1-201ENSMUST00000003645 Col5a2Q3U962 1497 aa17.83■□□□□ 0.44
Ercc1-201ENSMUST00000003645 Ltn1Q6A009 1767 aa17.82■□□□□ 0.44
Ercc1-201ENSMUST00000003645 Nucb1Q02819 459 aaKnown RBP17.82■□□□□ 0.44
Ercc1-201ENSMUST00000003645 Fchsd1Q6PFY1 688 aa17.82■□□□□ 0.44
Ercc1-201ENSMUST00000003645 Slc51aQ8R000 340 aa17.82■□□□□ 0.44
Ercc1-201ENSMUST00000003645 Ppp4r3bQ922R5 820 aa17.82■□□□□ 0.44
Ercc1-201ENSMUST00000003645 Sytl4Q9R0Q1 673 aa17.82■□□□□ 0.44
Ercc1-201ENSMUST00000003645 Mroh6V9GX81 722 aa17.82■□□□□ 0.44
Ercc1-201ENSMUST00000003645 Mast3Q3U214 1321 aa17.82■□□□□ 0.44
Ercc1-201ENSMUST00000003645 Npc1l1Q6T3U4 1333 aa17.82■□□□□ 0.44
Ercc1-201ENSMUST00000003645 Csrnp1P59054 583 aa17.81■□□□□ 0.44
Ercc1-201ENSMUST00000003645 NpeppsQ11011 920 aa17.81■□□□□ 0.44
Ercc1-201ENSMUST00000003645 Ube3cQ80U95 1083 aa17.81■□□□□ 0.44
Ercc1-201ENSMUST00000003645 Skor1Q8BX46 964 aa17.81■□□□□ 0.44
Ercc1-201ENSMUST00000003645 Ptcd1Q8C2E4 695 aaKnown RBP17.81■□□□□ 0.44
Ercc1-201ENSMUST00000003645 Bmp2kQ91Z96 1138 aa17.81■□□□□ 0.44
Ercc1-201ENSMUST00000003645 Btaf1E9QAE3 1848 aa17.81■□□□□ 0.44
Ercc1-201ENSMUST00000003645 PnnO35691 725 aaKnown RBP17.8■□□□□ 0.44
Ercc1-201ENSMUST00000003645 Slc7a3P70423 618 aa17.8■□□□□ 0.44
Ercc1-201ENSMUST00000003645 Spg7Q3ULF4 781 aa17.8■□□□□ 0.44
Ercc1-201ENSMUST00000003645 Pram1Q6BCL1 675 aa17.8■□□□□ 0.44
Ercc1-201ENSMUST00000003645 Map10Q8BJS7 891 aa17.8■□□□□ 0.44
Ercc1-201ENSMUST00000003645 Plekhg6Q8R0J1 787 aa17.8■□□□□ 0.44
Ercc1-201ENSMUST00000003645 Rbm33Q9CXK9 1231 aaKnown RBP17.8■□□□□ 0.44
Ercc1-201ENSMUST00000003645 Tbc1d8Q9Z1A9 1134 aa17.8■□□□□ 0.44
Ercc1-201ENSMUST00000003645 Cyp2c69E9PXC3 491 aa17.79■□□□□ 0.44
Ercc1-201ENSMUST00000003645 Cyp2c40P56657 491 aa17.79■□□□□ 0.44
Ercc1-201ENSMUST00000003645 Rbm15bQ6PHZ5 887 aaKnown RBP17.79■□□□□ 0.44
Ercc1-201ENSMUST00000003645 Gpr101Q80T62 511 aa17.79■□□□□ 0.44
Ercc1-201ENSMUST00000003645 Letm1Q9Z2I0 738 aa17.79■□□□□ 0.44
Ercc1-201ENSMUST00000003645 Flt1P35969 1333 aa17.79■□□□□ 0.44
Ercc1-201ENSMUST00000003645 Prl7d1P04769 244 aa17.79■□□□□ 0.44
Ercc1-201ENSMUST00000003645 Stat5bP42232 786 aa17.79■□□□□ 0.44
Ercc1-201ENSMUST00000003645 Dpf2Q61103 391 aaKnown RBP17.79■□□□□ 0.44
Ercc1-201ENSMUST00000003645 Nell2Q61220 819 aa17.79■□□□□ 0.44
Ercc1-201ENSMUST00000003645 TrhQ62361 256 aa17.79■□□□□ 0.44
Ercc1-201ENSMUST00000003645 Ak7Q9D2H2 614 aa17.79■□□□□ 0.44
Ercc1-201ENSMUST00000003645 Trmt44Q9D2Q2 713 aa17.79■□□□□ 0.44
Ercc1-201ENSMUST00000003645 CpdO89001 1377 aa17.78■□□□□ 0.44
Ercc1-201ENSMUST00000003645 Ppfia1B2RXQ2 1266 aa17.78■□□□□ 0.44
Ercc1-201ENSMUST00000003645 Tuft1O08970 390 aa17.78■□□□□ 0.44
Ercc1-201ENSMUST00000003645 XpcP51612 930 aa17.78■□□□□ 0.44
Ercc1-201ENSMUST00000003645 Ppp1r21Q3TDD9 780 aa17.78■□□□□ 0.44
Ercc1-201ENSMUST00000003645 Arfgef1G3X9K3 1846 aaKnown RBP17.77■□□□□ 0.44
Ercc1-201ENSMUST00000003645 D830030K20RikE9PYQ5 218 aa17.77■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Usp17lbE9Q9U0 468 aa17.77■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Gm3043K7N693 218 aa17.77■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Gm16440K7N6G6 218 aa17.77■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Gm2244L7N2A3 218 aa17.77■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Gm3278L7N2D2 218 aa17.77■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Gm8271L7N2E2 218 aa17.77■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Mapkapk5O54992 473 aa17.77■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Fam83bQ0VBM2 1012 aa17.77■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Edrf1Q6GQV7 1239 aa17.77■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Spire2Q8K1S6 718 aa17.77■□□□□ 0.43
Ercc1-201ENSMUST00000003645 FliiQ9JJ28 1271 aa17.77■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Hsp90b1P08113 802 aaKnown RBP17.76■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Cyp2d10P24456 504 aa17.76■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Kif22Q3V300 660 aa17.76■□□□□ 0.43
Ercc1-201ENSMUST00000003645 B4galnt4Q766D5 1034 aa17.76■□□□□ 0.43
Ercc1-201ENSMUST00000003645 FktnQ8R507 461 aa17.76■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Rnaseh2aQ9CWY8 301 aa17.76■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Myh15E9Q264 1925 aa17.76■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Rbbp6P97868 1790 aaKnown RBP17.75■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Myh4Q5SX39 1939 aa17.75■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Mdm2P23804 489 aa17.75■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Pla2g4fQ50L41 855 aa17.75■□□□□ 0.43
Ercc1-201ENSMUST00000003645 CbarpQ66L44 698 aa17.75■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Slc44a4Q91VA1 707 aa17.75■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Pus3Q9JI38 481 aa17.75■□□□□ 0.43
Ercc1-201ENSMUST00000003645 AaasP58742 546 aa17.74■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Siah1aP61092 282 aa17.74■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Map3k9Q3U1V8 1077 aa17.74■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Krt40Q6IFX3 439 aa17.74■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Ipo8Q7TMY7 1010 aa17.74■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Mfap1aC0HKD8 439 aaKnown RBP17.73■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Mfap1bC0HKD9 439 aaKnown RBP17.73■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Zbtb7aO88939 569 aaKnown RBP17.73■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Tbc1d32Q3URV1 1296 aa17.73■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Thrap3Q569Z6 951 aaKnown RBP17.73■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Ddx11Q6AXC6 880 aa17.73■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Egfem1Q8C088 590 aa17.73■□□□□ 0.43
Ercc1-201ENSMUST00000003645 RarsQ9D0I9 660 aaKnown RBP17.73■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Rnf123Q5XPI3 1314 aa17.72■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Terf1P70371 421 aa17.72■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Vil1Q62468 827 aa17.72■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Ppip5k2Q6ZQB6 1129 aa17.72■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Mb21d2Q8C525 428 aa17.72■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Erc1Q99MI1 1120 aa17.72■□□□□ 0.43
Ercc1-201ENSMUST00000003645 MthfsQ9D110 203 aa17.72■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Stag1Q9D3E6 1258 aa17.72■□□□□ 0.43
Ercc1-201ENSMUST00000003645 Sept12Q9D451 317 aa17.72■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 23.3 ms