RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 GCSAMQ8N6F7 178 aa14.73□□□□□ -0.05
SHKBP1-227ENST00000602011 CYB561A3Q8NBI2 242 aa14.73□□□□□ -0.05
SHKBP1-227ENST00000602011 SCCPDHQ8NBX0 429 aa14.73□□□□□ -0.05
SHKBP1-227ENST00000602011 C19orf18Q8NEA5 215 aa14.73□□□□□ -0.05
SHKBP1-227ENST00000602011 OR8S1Q8NH09 359 aa14.73□□□□□ -0.05
SHKBP1-227ENST00000602011 LHX4Q969G2 390 aa14.73□□□□□ -0.05
SHKBP1-227ENST00000602011 MYLK2Q9H1R3 596 aa14.73□□□□□ -0.05
SHKBP1-227ENST00000602011 RPUSD1Q9UJJ7 312 aaKnown RBP14.73□□□□□ -0.05
SHKBP1-227ENST00000602011 hCG_1807616A0A1W2PRN6 198 aa14.72□□□□□ -0.05
SHKBP1-227ENST00000602011 BTBD17A6NE02 478 aa14.72□□□□□ -0.05
SHKBP1-227ENST00000602011 ZNF878C9JN71 531 aa14.72□□□□□ -0.05
SHKBP1-227ENST00000602011 GPR137BO60478 399 aa14.72□□□□□ -0.05
SHKBP1-227ENST00000602011 GYPAP02724 150 aa14.72□□□□□ -0.05
SHKBP1-227ENST00000602011 ENTPD1P49961 510 aa14.72□□□□□ -0.05
SHKBP1-227ENST00000602011 SLC25A1P53007 311 aa14.72□□□□□ -0.05
SHKBP1-227ENST00000602011 TAF9Q16594 264 aa14.72□□□□□ -0.05
SHKBP1-227ENST00000602011 RUSC1-AS1Q66K80 236 aa14.72□□□□□ -0.05
SHKBP1-227ENST00000602011 PGBD2Q6P3X8 592 aa14.72□□□□□ -0.05
SHKBP1-227ENST00000602011 C1orf122Q6ZSJ8 110 aa14.72□□□□□ -0.05
SHKBP1-227ENST00000602011 RASSF6Q6ZTQ3 369 aa14.72□□□□□ -0.05
SHKBP1-227ENST00000602011 FAM90A1Q86YD7 464 aa14.72□□□□□ -0.05
SHKBP1-227ENST00000602011 ZSCAN4Q8NAM6 433 aaPredicted RBP14.72□□□□□ -0.05
SHKBP1-227ENST00000602011 LY6G5BQ8NDX9 201 aa14.72□□□□□ -0.05
SHKBP1-227ENST00000602011 OR52H1Q8NGJ2 320 aa14.72□□□□□ -0.05
SHKBP1-227ENST00000602011 LINC01006Q8NI28 216 aa14.72□□□□□ -0.05
SHKBP1-227ENST00000602011 SLAMF6Q96DU3 332 aa14.72□□□□□ -0.05
SHKBP1-227ENST00000602011 DNTTIP1Q9H147 329 aa14.72□□□□□ -0.05
SHKBP1-227ENST00000602011 ABCB9Q9NP78 766 aa14.72□□□□□ -0.05
SHKBP1-227ENST00000602011 ZNF593O00488 134 aaPredicted RBP14.71□□□□□ -0.05
SHKBP1-227ENST00000602011 FBP1P09467 338 aa14.71□□□□□ -0.05
SHKBP1-227ENST00000602011 EEF1B2P24534 225 aaKnown RBP14.71□□□□□ -0.05
SHKBP1-227ENST00000602011 PRSS12P56730 875 aa14.71□□□□□ -0.05
SHKBP1-227ENST00000602011 LNX2Q8N448 690 aa14.71□□□□□ -0.05
SHKBP1-227ENST00000602011 CSNK2A3Q8NEV1 391 aa14.71□□□□□ -0.05
SHKBP1-227ENST00000602011 OR56B2PQ8NGI1 322 aa14.71□□□□□ -0.05
SHKBP1-227ENST00000602011 OR2AE1Q8NHA4 323 aa14.71□□□□□ -0.05
SHKBP1-227ENST00000602011 UBE2FQ969M7 185 aa14.71□□□□□ -0.05
SHKBP1-227ENST00000602011 ITFG2Q969R8 447 aa14.71□□□□□ -0.05
SHKBP1-227ENST00000602011 FN3KQ9H479 309 aa14.71□□□□□ -0.05
SHKBP1-227ENST00000602011 RGCCQ9H4X1 137 aa14.71□□□□□ -0.05
SHKBP1-227ENST00000602011 C16orf95Q9H693 158 aa14.71□□□□□ -0.05
SHKBP1-227ENST00000602011 SMURF1Q9HCE7 757 aa14.71□□□□□ -0.05
SHKBP1-227ENST00000602011 CENPMQ9NSP4 180 aa14.71□□□□□ -0.05
SHKBP1-227ENST00000602011 NDE1Q9NXR1 346 aa14.71□□□□□ -0.05
SHKBP1-227ENST00000602011 IFNGP01579 166 aa14.7□□□□□ -0.06
SHKBP1-227ENST00000602011 PYCR1P32322 319 aa14.7□□□□□ -0.06
SHKBP1-227ENST00000602011 PRKXP51817 358 aa14.7□□□□□ -0.06
SHKBP1-227ENST00000602011 ATPAF1Q5TC12 328 aaPredicted RBP14.7□□□□□ -0.06
SHKBP1-227ENST00000602011 DPY19L4Q7Z388 723 aa14.7□□□□□ -0.06
SHKBP1-227ENST00000602011 PGAM4Q8N0Y7 254 aa14.7□□□□□ -0.06
SHKBP1-227ENST00000602011 RNF148Q8N7C7 305 aa14.7□□□□□ -0.06
SHKBP1-227ENST00000602011 DTX3Q8N9I9 347 aa14.7□□□□□ -0.06
SHKBP1-227ENST00000602011 RBM4BQ9BQ04 359 aaKnown RBP14.7□□□□□ -0.06
SHKBP1-227ENST00000602011 RASSF4Q9H2L5 321 aa14.7□□□□□ -0.06
SHKBP1-227ENST00000602011 PRPF19Q9UMS4 504 aaKnown RBP14.7□□□□□ -0.06
SHKBP1-227ENST00000602011 COMMD3-BMI1R4GMX3 469 aa14.7□□□□□ -0.06
SHKBP1-227ENST00000602011 TVP23AA6NH52 213 aa14.69□□□□□ -0.06
SHKBP1-227ENST00000602011 NDUFB3O43676 98 aa14.69□□□□□ -0.06
SHKBP1-227ENST00000602011 SPARCP09486 303 aa14.69□□□□□ -0.06
SHKBP1-227ENST00000602011 TGFBR2P37173 567 aa14.69□□□□□ -0.06
SHKBP1-227ENST00000602011 PROK1P58294 105 aa14.69□□□□□ -0.06
SHKBP1-227ENST00000602011 KRTAP10-3P60369 221 aa14.69□□□□□ -0.06
SHKBP1-227ENST00000602011 IL5RAQ01344 420 aa14.69□□□□□ -0.06
SHKBP1-227ENST00000602011 TIGD6Q17RP2 521 aa14.69□□□□□ -0.06
SHKBP1-227ENST00000602011 LRRC10Q5BKY1 277 aa14.69□□□□□ -0.06
SHKBP1-227ENST00000602011 ASPHD2Q6ICH7 369 aa14.69□□□□□ -0.06
SHKBP1-227ENST00000602011 ZNF826PQ6ZT77 177 aa14.69□□□□□ -0.06
SHKBP1-227ENST00000602011 SLC16A9Q7RTY1 509 aa14.69□□□□□ -0.06
SHKBP1-227ENST00000602011 GALNT4Q8N4A0 578 aa14.69□□□□□ -0.06
SHKBP1-227ENST00000602011 SLC37A3Q8NCC5 494 aa14.69□□□□□ -0.06
SHKBP1-227ENST00000602011 OR1M1Q8NGA1 313 aa14.69□□□□□ -0.06
SHKBP1-227ENST00000602011 OR5R1Q8NH85 324 aa14.69□□□□□ -0.06
SHKBP1-227ENST00000602011 ST8SIA4Q92187 359 aa14.69□□□□□ -0.06
SHKBP1-227ENST00000602011 MICU1Q9BPX6 476 aa14.69□□□□□ -0.06
SHKBP1-227ENST00000602011 EGLN3Q9H6Z9 239 aa14.69□□□□□ -0.06
SHKBP1-227ENST00000602011 V9GYQ6 96 aa14.69□□□□□ -0.06
SHKBP1-227ENST00000602011 A0A0U1RQK1 487 aa14.68□□□□□ -0.06
SHKBP1-227ENST00000602011 SLC22A31A6NKX4 558 aa14.68□□□□□ -0.06
SHKBP1-227ENST00000602011 ANXA2P2A6NMY6 339 aa14.68□□□□□ -0.06
SHKBP1-227ENST00000602011 TNFRSF11BO00300 401 aa14.68□□□□□ -0.06
SHKBP1-227ENST00000602011 TSPAN9O75954 239 aa14.68□□□□□ -0.06
SHKBP1-227ENST00000602011 IGHV4-59P01825 116 aa14.68□□□□□ -0.06
SHKBP1-227ENST00000602011 HSD11B1P28845 292 aa14.68□□□□□ -0.06
SHKBP1-227ENST00000602011 GNALP38405 381 aa14.68□□□□□ -0.06
SHKBP1-227ENST00000602011 TGM4P49221 684 aa14.68□□□□□ -0.06
SHKBP1-227ENST00000602011 FAM3AP98173 230 aa14.68□□□□□ -0.06
SHKBP1-227ENST00000602011 SHFQ7M4L6 423 aa14.68□□□□□ -0.06
SHKBP1-227ENST00000602011 C11orf53Q8IXP5 236 aa14.68□□□□□ -0.06
SHKBP1-227ENST00000602011 OR2T33Q8NG76 320 aa14.68□□□□□ -0.06
SHKBP1-227ENST00000602011 OR10Z1Q8NGY1 313 aa14.68□□□□□ -0.06
SHKBP1-227ENST00000602011 LRRC29Q8WV35 223 aa14.68□□□□□ -0.06
SHKBP1-227ENST00000602011 SGK3Q96BR1 496 aa14.68□□□□□ -0.06
SHKBP1-227ENST00000602011 MED30Q96HR3 178 aa14.68□□□□□ -0.06
SHKBP1-227ENST00000602011 ELAC2Q9BQ52 826 aaKnown RBP14.68□□□□□ -0.06
SHKBP1-227ENST00000602011 NMNAT2Q9BZQ4 307 aa14.68□□□□□ -0.06
SHKBP1-227ENST00000602011 TLNRD1Q9H1K6 362 aa14.68□□□□□ -0.06
SHKBP1-227ENST00000602011 OR10A2Q9H208 303 aa14.68□□□□□ -0.06
SHKBP1-227ENST00000602011 TCF7L1Q9HCS4 588 aa14.68□□□□□ -0.06
SHKBP1-227ENST00000602011 MPC1Q9Y5U8 109 aa14.68□□□□□ -0.06
SHKBP1-227ENST00000602011 ARPC2O15144 300 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms