RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 POLR2IP36954 125 aaKnown RBP10.5□□□□□ -0.73
HSPG2-212ENST00000493940 PSMB10P40306 273 aa10.5□□□□□ -0.73
HSPG2-212ENST00000493940 GSK3AP49840 483 aa10.5□□□□□ -0.73
HSPG2-212ENST00000493940 HILS1P60008 231 aa10.5□□□□□ -0.73
HSPG2-212ENST00000493940 GRB2P62993 217 aaKnown RBP10.5□□□□□ -0.73
HSPG2-212ENST00000493940 CSNK2BP67870 215 aa10.5□□□□□ -0.73
HSPG2-212ENST00000493940 DMRTC1Q5HYR2 192 aa10.5□□□□□ -0.73
HSPG2-212ENST00000493940 WDR25Q64LD2 544 aaPredicted RBP10.5□□□□□ -0.73
HSPG2-212ENST00000493940 DUX4L9Q6RFH8 374 aaPredicted RBP10.5□□□□□ -0.73
HSPG2-212ENST00000493940 GCSAMQ8N6F7 178 aa10.5□□□□□ -0.73
HSPG2-212ENST00000493940 OR5K1Q8NHB7 308 aa10.5□□□□□ -0.73
HSPG2-212ENST00000493940 NANPQ8TBE9 248 aa10.5□□□□□ -0.73
HSPG2-212ENST00000493940 THEM6Q8WUY1 208 aa10.5□□□□□ -0.73
HSPG2-212ENST00000493940 TAF15Q92804 592 aaKnown RBP eCLIP10.5□□□□□ -0.73
HSPG2-212ENST00000493940 TEAD3Q99594 435 aa10.5□□□□□ -0.73
HSPG2-212ENST00000493940 SSBP3Q9BWW4 388 aaPredicted RBP10.5□□□□□ -0.73
HSPG2-212ENST00000493940 TTTY10Q9BZA0 68 aa10.5□□□□□ -0.73
HSPG2-212ENST00000493940 SMURF1Q9HCE7 757 aa10.5□□□□□ -0.73
HSPG2-212ENST00000493940 C1orf123Q9NWV4 160 aa10.5□□□□□ -0.73
HSPG2-212ENST00000493940 MRPL15Q9P015 296 aaKnown RBP10.5□□□□□ -0.73
HSPG2-212ENST00000493940 RNF7Q9UBF6 113 aa10.5□□□□□ -0.73
HSPG2-212ENST00000493940 DUX4Q9UBX2 424 aa10.5□□□□□ -0.73
HSPG2-212ENST00000493940 RHBDD3Q9Y3P4 386 aa10.5□□□□□ -0.73
HSPG2-212ENST00000493940 AUP1Q9Y679 476 aa10.5□□□□□ -0.73
HSPG2-212ENST00000493940 IGHV3OR15-7A0A075B7D8 119 aa10.49□□□□□ -0.73
HSPG2-212ENST00000493940 C22orf46C9J442 243 aa10.49□□□□□ -0.73
HSPG2-212ENST00000493940 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.49□□□□□ -0.73
HSPG2-212ENST00000493940 XRCC2O43543 280 aa10.49□□□□□ -0.73
HSPG2-212ENST00000493940 FSTL3O95633 263 aa10.49□□□□□ -0.73
HSPG2-212ENST00000493940 TFF1P04155 84 aa10.49□□□□□ -0.73
HSPG2-212ENST00000493940 HMGN1P05114 100 aa10.49□□□□□ -0.73
HSPG2-212ENST00000493940 LYNP07948 512 aa10.49□□□□□ -0.73
HSPG2-212ENST00000493940 MRPL3P09001 348 aaKnown RBP10.49□□□□□ -0.73
HSPG2-212ENST00000493940 H2BFMP0C1H6 154 aa10.49□□□□□ -0.73
HSPG2-212ENST00000493940 AMY2BP19961 511 aa10.49□□□□□ -0.73
HSPG2-212ENST00000493940 GATA3P23771 443 aa10.49□□□□□ -0.73
HSPG2-212ENST00000493940 HSD11B1P28845 292 aa10.49□□□□□ -0.73
HSPG2-212ENST00000493940 BLVRAP53004 296 aa10.49□□□□□ -0.73
HSPG2-212ENST00000493940 SNAPC1Q16533 368 aa10.49□□□□□ -0.73
HSPG2-212ENST00000493940 GFOD2Q3B7J2 385 aa10.49□□□□□ -0.73
HSPG2-212ENST00000493940 ESCO2Q56NI9 601 aa10.49□□□□□ -0.73
HSPG2-212ENST00000493940 SHFQ7M4L6 423 aa10.49□□□□□ -0.73
HSPG2-212ENST00000493940 MUC20Q8N307 709 aaPredicted RBP10.49□□□□□ -0.73
HSPG2-212ENST00000493940 LRTOMTQ8WZ04 291 aa10.49□□□□□ -0.73
HSPG2-212ENST00000493940 NRBF2Q96F24 287 aa10.49□□□□□ -0.73
HSPG2-212ENST00000493940 NEIL1Q96FI4 390 aaPredicted RBP10.49□□□□□ -0.73
HSPG2-212ENST00000493940 DUX5Q96PT3 197 aa10.49□□□□□ -0.73
HSPG2-212ENST00000493940 TOR3AQ9H497 397 aa10.49□□□□□ -0.73
HSPG2-212ENST00000493940 ZNF556Q9HAH1 456 aa10.49□□□□□ -0.73
HSPG2-212ENST00000493940 PAPOLBQ9NRJ5 636 aaKnown RBP10.49□□□□□ -0.73
HSPG2-212ENST00000493940 MIOXQ9UGB7 285 aa10.49□□□□□ -0.73
HSPG2-212ENST00000493940 LRCH1Q9Y2L9 728 aa10.49□□□□□ -0.73
HSPG2-212ENST00000493940 LRP12Q9Y561 859 aa10.49□□□□□ -0.73
HSPG2-212ENST00000493940 IGHV2-70DA0A0C4DH43 119 aa10.48□□□□□ -0.73
HSPG2-212ENST00000493940 PRODHO43272 600 aa10.48□□□□□ -0.73
HSPG2-212ENST00000493940 GYPAP02724 150 aa10.48□□□□□ -0.73
HSPG2-212ENST00000493940 SLC15A1P46059 708 aa10.48□□□□□ -0.73
HSPG2-212ENST00000493940 PITPNBP48739 271 aa10.48□□□□□ -0.73
HSPG2-212ENST00000493940 GNB2P62879 340 aa10.48□□□□□ -0.73
HSPG2-212ENST00000493940 ATP6AP1Q15904 470 aa10.48□□□□□ -0.73
HSPG2-212ENST00000493940 TIGD6Q17RP2 521 aa10.48□□□□□ -0.73
HSPG2-212ENST00000493940 KDM4DQ6B0I6 523 aa10.48□□□□□ -0.73
HSPG2-212ENST00000493940 RHOUQ7L0Q8 258 aa10.48□□□□□ -0.73
HSPG2-212ENST00000493940 FAM90A1Q86YD7 464 aa10.48□□□□□ -0.73
HSPG2-212ENST00000493940 SIGLECL1Q8N7X8 197 aa10.48□□□□□ -0.73
HSPG2-212ENST00000493940 OR8B12Q8NGG6 310 aa10.48□□□□□ -0.73
HSPG2-212ENST00000493940 RAB40AQ8WXH6 277 aa10.48□□□□□ -0.73
HSPG2-212ENST00000493940 ERGIC1Q969X5 290 aa10.48□□□□□ -0.73
HSPG2-212ENST00000493940 DUS3LQ96G46 650 aaKnown RBP10.48□□□□□ -0.73
HSPG2-212ENST00000493940 PGAM5Q96HS1 289 aa10.48□□□□□ -0.73
HSPG2-212ENST00000493940 SEMA6AQ9H2E6 1030 aa10.48□□□□□ -0.73
HSPG2-212ENST00000493940 FN3KRPQ9HA64 309 aa10.48□□□□□ -0.73
HSPG2-212ENST00000493940 TRRAPQ9Y4A5 3859 aa10.47□□□□□ -0.73
HSPG2-212ENST00000493940 CMYA5Q8N3K9 4069 aa10.47□□□□□ -0.73
HSPG2-212ENST00000493940 PKD1L1Q8TDX9 2849 aa10.47□□□□□ -0.73
HSPG2-212ENST00000493940 A0A0A6YYJ9 748 aa10.47□□□□□ -0.73
HSPG2-212ENST00000493940 KIR2DS1A0A191URI9 304 aa10.47□□□□□ -0.73
HSPG2-212ENST00000493940 LRRC30A6NM36 301 aa10.47□□□□□ -0.73
HSPG2-212ENST00000493940 ZAR1LA6NP61 321 aa10.47□□□□□ -0.73
HSPG2-212ENST00000493940 LGALS8O00214 317 aa10.47□□□□□ -0.73
HSPG2-212ENST00000493940 PAICSP22234 425 aaKnown RBP10.47□□□□□ -0.73
HSPG2-212ENST00000493940 RPS7P62081 194 aaKnown RBP10.47□□□□□ -0.73
HSPG2-212ENST00000493940 OR8B8Q15620 311 aa10.47□□□□□ -0.73
HSPG2-212ENST00000493940 SLC35D3Q5M8T2 416 aa10.47□□□□□ -0.73
HSPG2-212ENST00000493940 AADACL4Q5VUY2 407 aa10.47□□□□□ -0.73
HSPG2-212ENST00000493940 C12orf73Q69YU5 71 aa10.47□□□□□ -0.73
HSPG2-212ENST00000493940 WDR82Q6UXN9 313 aa10.47□□□□□ -0.73
HSPG2-212ENST00000493940 DCDC5Q6ZRR9 648 aa10.47□□□□□ -0.73
HSPG2-212ENST00000493940 USP43Q70EL4 1123 aa10.47□□□□□ -0.73
HSPG2-212ENST00000493940 C1orf87Q8N0U7 546 aa10.47□□□□□ -0.73
HSPG2-212ENST00000493940 PARP8Q8N3A8 854 aa10.47□□□□□ -0.73
HSPG2-212ENST00000493940 OR1M1Q8NGA1 313 aa10.47□□□□□ -0.73
HSPG2-212ENST00000493940 OR11L1Q8NGX0 322 aa10.47□□□□□ -0.73
HSPG2-212ENST00000493940 ZNF418Q8TF45 676 aaPredicted RBP10.47□□□□□ -0.73
HSPG2-212ENST00000493940 ITPKCQ96DU7 683 aa10.47□□□□□ -0.73
HSPG2-212ENST00000493940 NUDT16L1Q9BRJ7 211 aaKnown RBP10.47□□□□□ -0.73
HSPG2-212ENST00000493940 SLC22A4Q9H015 551 aa10.47□□□□□ -0.73
HSPG2-212ENST00000493940 YY1AP1Q9H869 796 aa10.47□□□□□ -0.73
HSPG2-212ENST00000493940 FAM206AQ9NX38 181 aa10.47□□□□□ -0.73
HSPG2-212ENST00000493940 NUP50Q9UKX7 468 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 245.4 ms