RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Rcc2Q8BK67 520 aaKnown RBP14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Abhd14bQ8VCR7 210 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Slco1b2Q9JJL3 689 aa14.14□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr585E9PXW4 318 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 H2-T10F6T1I5 379 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Rpl27P61358 136 aaKnown RBP14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 SryQ05738 395 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Lyg2Q3V1I0 213 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Prmt8Q6PAK3 394 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Zfp955aQ80XR7 545 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Mboat1Q8BH98 492 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Gpr152Q8BXS7 511 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr488Q8VG02 314 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Dnajb11Q99KV1 358 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Nudt21Q9CQF3 227 aaKnown RBP14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Trappc6bQ9D289 158 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Q9D4G1 230 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Acot12Q9DBK0 556 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 MioxQ9QXN5 285 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Clec4dQ9Z2H6 219 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 P01809 118 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Ces2fQ08ED5 561 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Nkx6-3Q3UHX8 262 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Defb28Q3V2L0 89 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Ceacam18Q9D871 376 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr957Q9EQB7 311 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Trav15d-1-dv6d-1A0A075B624 124 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr663A0A1B0GSI9 319 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Gm436B1AVU6 407 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Mptx2D3YYJ7 219 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Ldlrad1D3YYZ1 218 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Gm21767J3QPV5 180 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 HbzP06467 142 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Tnfaip3Q60769 775 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Tex261Q62302 196 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Faap24Q8BHL6 221 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Gpr137bQ8BNQ3 385 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 CebpzosQ8BTE5 80 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Mfsd9Q8C0T7 466 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr460Q8VF31 314 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Lnx2Q91XL2 687 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Emc6Q9CQW0 110 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Dpep3Q9DA79 493 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Plxdc2Q9DC11 530 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Gm5039J3QNT6 144 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr889L7N1Y6 314 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Pla2g5P97391 137 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Znf8Q8BGV5 572 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Cd177Q8R2S8 817 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Pcdhga3Q91XY5 928 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Mcts1Q9DB27 181 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr710Q9EP55 310 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 RfxankQ9Z205 269 aa14.13□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Casp8ap2Q9WUF3 1962 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Tmem74bA2AU34 232 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr225E9PWF9 419 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Spi1P17433 272 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 VtnP29788 478 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Cdk5r1P61809 307 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Gm10750Q3V0I0 133 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Gramd2aQ3V3G7 320 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Gm14851Q5ERJ0 116 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Slc17a1Q61983 465 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Cggbp1Q8BHG9 167 aaKnown RBP14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Cnot4Q8BT14 575 aaKnown RBP14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Tmem27Q9ESG4 222 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr1291-ps1A0A286YE47 326 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Col9a3A2ACT7 680 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Gm43720E0CXM8 267 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr597L7N224 315 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Kcns1O35173 497 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Sp3O70494 783 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 PtgirP43252 415 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 FapP97321 761 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Tmem217Q14AF1 189 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Abhd17bQ7M759 288 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr1321Q7TQW4 319 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr198Q7TS40 306 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Dcaf12l1Q8CBW4 501 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Neil1Q8K4Q6 389 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Olfr1143Q8VEU8 314 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 4930553M12RikQ9CUH1 165 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Il36bQ9D6Z6 183 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Tmem25Q9DCF1 365 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 MokQ9WVS4 420 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 A0A286YD13 301 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Gm15446D3Z5Y8 553 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Slc16a7O70451 484 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 AcheP21836 614 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Rps2P25444 293 aaKnown RBP14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 SgcaP82350 387 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 HykkQ5U5V2 376 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Exosc3Q7TQK4 274 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Stk17bQ8BG48 372 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Acaa2Q8BWT1 397 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Uqcr10Q8R1I1 64 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Gm20489A2AGH5 449 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Gm42791D3YYB5 209 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 HgdO09173 445 aa14.12□□□□□ -0.15
Ccdc88b-201ENSMUST00000113440 Fam196aQ3USH1 422 aa14.12□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 45.8 ms