RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 DUX4L2P0CJ85 424 aa13.65□□□□□ -0.22
COLCA2-207ENST00000639470 DUX4L3P0CJ86 424 aa13.65□□□□□ -0.22
COLCA2-207ENST00000639470 DUX4L4P0CJ87 422 aa13.65□□□□□ -0.22
COLCA2-207ENST00000639470 DUX4L5P0CJ88 424 aa13.65□□□□□ -0.22
COLCA2-207ENST00000639470 DUX4L6P0CJ89 424 aa13.65□□□□□ -0.22
COLCA2-207ENST00000639470 DUX4L7P0CJ90 424 aa13.65□□□□□ -0.22
COLCA2-207ENST00000639470 GATA4P43694 442 aa13.65□□□□□ -0.22
COLCA2-207ENST00000639470 PITPNBP48739 271 aa13.65□□□□□ -0.22
COLCA2-207ENST00000639470 CX3CR1P49238 355 aa13.65□□□□□ -0.22
COLCA2-207ENST00000639470 GNB2P62879 340 aa13.65□□□□□ -0.22
COLCA2-207ENST00000639470 UBA52P62987 128 aaKnown RBP13.65□□□□□ -0.22
COLCA2-207ENST00000639470 PAX8Q06710 450 aa13.65□□□□□ -0.22
COLCA2-207ENST00000639470 TAF13Q15543 124 aa13.65□□□□□ -0.22
COLCA2-207ENST00000639470 GFOD2Q3B7J2 385 aa13.65□□□□□ -0.22
COLCA2-207ENST00000639470 KLHL12Q53G59 568 aa13.65□□□□□ -0.22
COLCA2-207ENST00000639470 PLBD1Q6P4A8 553 aa13.65□□□□□ -0.22
COLCA2-207ENST00000639470 DUX4L9Q6RFH8 374 aaPredicted RBP13.65□□□□□ -0.22
COLCA2-207ENST00000639470 DRAM2Q6UX65 266 aa13.65□□□□□ -0.22
COLCA2-207ENST00000639470 ZNF841Q6ZN19 808 aa13.65□□□□□ -0.22
COLCA2-207ENST00000639470 USP43Q70EL4 1123 aa13.65□□□□□ -0.22
COLCA2-207ENST00000639470 FAM57BQ71RH2 274 aa13.65□□□□□ -0.22
COLCA2-207ENST00000639470 PRSS45Q7RTY3 260 aa13.65□□□□□ -0.22
COLCA2-207ENST00000639470 MUC20Q8N307 709 aaPredicted RBP13.65□□□□□ -0.22
COLCA2-207ENST00000639470 TEX47Q8TBZ9 253 aa13.65□□□□□ -0.22
COLCA2-207ENST00000639470 SLC7A6OSQ96CW6 309 aaPredicted RBP13.65□□□□□ -0.22
COLCA2-207ENST00000639470 SEH1LQ96EE3 360 aa13.65□□□□□ -0.22
COLCA2-207ENST00000639470 NEIL1Q96FI4 390 aaPredicted RBP13.65□□□□□ -0.22
COLCA2-207ENST00000639470 SUCNR1Q9BXA5 334 aa13.65□□□□□ -0.22
COLCA2-207ENST00000639470 SMURF1Q9HCE7 757 aa13.65□□□□□ -0.22
COLCA2-207ENST00000639470 DUX4Q9UBX2 424 aa13.65□□□□□ -0.22
COLCA2-207ENST00000639470 IGHV2-70DA0A0C4DH43 119 aa13.64□□□□□ -0.23
COLCA2-207ENST00000639470 ZNF878C9JN71 531 aa13.64□□□□□ -0.23
COLCA2-207ENST00000639470 ANXA2P07355 339 aaKnown RBP13.64□□□□□ -0.23
COLCA2-207ENST00000639470 ZNF3P17036 446 aa13.64□□□□□ -0.23
COLCA2-207ENST00000639470 GSTT1P30711 240 aa13.64□□□□□ -0.23
COLCA2-207ENST00000639470 GRK5P34947 590 aa13.64□□□□□ -0.23
COLCA2-207ENST00000639470 NAA10P41227 235 aaPredicted RBP13.64□□□□□ -0.23
COLCA2-207ENST00000639470 HCCSP53701 268 aa13.64□□□□□ -0.23
COLCA2-207ENST00000639470 ZNF121P58317 390 aaPredicted RBP13.64□□□□□ -0.23
COLCA2-207ENST00000639470 CSNK2BP67870 215 aa13.64□□□□□ -0.23
COLCA2-207ENST00000639470 GINS1Q14691 196 aa13.64□□□□□ -0.23
COLCA2-207ENST00000639470 ZNF181Q2M3W8 571 aa13.64□□□□□ -0.23
COLCA2-207ENST00000639470 TUSC1Q2TAM9 212 aa13.64□□□□□ -0.23
COLCA2-207ENST00000639470 TEX30Q5JUR7 227 aa13.64□□□□□ -0.23
COLCA2-207ENST00000639470 CD300LDQ6UXZ3 194 aa13.64□□□□□ -0.23
COLCA2-207ENST00000639470 SLC16A9Q7RTY1 509 aa13.64□□□□□ -0.23
COLCA2-207ENST00000639470 TIGD4Q8IY51 512 aa13.64□□□□□ -0.23
COLCA2-207ENST00000639470 Q8TCH9 128 aa13.64□□□□□ -0.23
COLCA2-207ENST00000639470 FAM216AQ8WUB2 273 aa13.64□□□□□ -0.23
COLCA2-207ENST00000639470 POP5Q969H6 163 aaKnown RBP13.64□□□□□ -0.23
COLCA2-207ENST00000639470 SGK3Q96BR1 496 aa13.64□□□□□ -0.23
COLCA2-207ENST00000639470 INTS14Q96SY0 518 aa13.64□□□□□ -0.23
COLCA2-207ENST00000639470 MMADHCQ9H3L0 296 aaPredicted RBP13.64□□□□□ -0.23
COLCA2-207ENST00000639470 C1orf123Q9NWV4 160 aa13.64□□□□□ -0.23
COLCA2-207ENST00000639470 NUP50Q9UKX7 468 aa13.64□□□□□ -0.23
COLCA2-207ENST00000639470 BAIAP2Q9UQB8 552 aa13.64□□□□□ -0.23
COLCA2-207ENST00000639470 LRCH1Q9Y2L9 728 aa13.64□□□□□ -0.23
COLCA2-207ENST00000639470 TENM1Q9UKZ4 2725 aa13.63□□□□□ -0.23
COLCA2-207ENST00000639470 TRAV40A0A0B4J280 105 aa13.63□□□□□ -0.23
COLCA2-207ENST00000639470 DNAJC9-AS1A6NH13 148 aa13.63□□□□□ -0.23
COLCA2-207ENST00000639470 TRIM77I1YAP6 450 aa13.63□□□□□ -0.23
COLCA2-207ENST00000639470 M0R129 80 aa13.63□□□□□ -0.23
COLCA2-207ENST00000639470 IFNGP01579 166 aa13.63□□□□□ -0.23
COLCA2-207ENST00000639470 TFF1P04155 84 aa13.63□□□□□ -0.23
COLCA2-207ENST00000639470 FAM3AP98173 230 aa13.63□□□□□ -0.23
COLCA2-207ENST00000639470 WDR25Q64LD2 544 aaPredicted RBP13.63□□□□□ -0.23
COLCA2-207ENST00000639470 BRD3OSQ6XYD6 125 aa13.63□□□□□ -0.23
COLCA2-207ENST00000639470 TRPM8Q7Z2W7 1104 aa13.63□□□□□ -0.23
COLCA2-207ENST00000639470 SPATA24Q86W54 205 aa13.63□□□□□ -0.23
COLCA2-207ENST00000639470 OR8B3Q8NGG8 313 aa13.63□□□□□ -0.23
COLCA2-207ENST00000639470 GCDHQ92947 438 aaPredicted RBP13.63□□□□□ -0.23
COLCA2-207ENST00000639470 OR8B2Q96RD0 313 aa13.63□□□□□ -0.23
COLCA2-207ENST00000639470 MRI1Q9BV20 369 aa13.63□□□□□ -0.23
COLCA2-207ENST00000639470 FGF23Q9GZV9 251 aaPredicted RBP13.63□□□□□ -0.23
COLCA2-207ENST00000639470 MIOXQ9UGB7 285 aa13.63□□□□□ -0.23
COLCA2-207ENST00000639470 TMEM89A2RUT3 159 aa13.62□□□□□ -0.23
COLCA2-207ENST00000639470 A6NLC8 198 aa13.62□□□□□ -0.23
COLCA2-207ENST00000639470 LRRC30A6NM36 301 aa13.62□□□□□ -0.23
COLCA2-207ENST00000639470 PRR32B1ATL7 298 aa13.62□□□□□ -0.23
COLCA2-207ENST00000639470 IFNL4K9M1U5 179 aa13.62□□□□□ -0.23
COLCA2-207ENST00000639470 GLCEO94923 617 aa13.62□□□□□ -0.23
COLCA2-207ENST00000639470 GYPAP02724 150 aa13.62□□□□□ -0.23
COLCA2-207ENST00000639470 SFTPBP07988 381 aa13.62□□□□□ -0.23
COLCA2-207ENST00000639470 IRF2P14316 349 aa13.62□□□□□ -0.23
COLCA2-207ENST00000639470 OPRL1P41146 370 aa13.62□□□□□ -0.23
COLCA2-207ENST00000639470 DMRTC1Q5HYR2 192 aa13.62□□□□□ -0.23
COLCA2-207ENST00000639470 RUSC1-AS1Q66K80 236 aa13.62□□□□□ -0.23
COLCA2-207ENST00000639470 CPOQ8IVL8 374 aa13.62□□□□□ -0.23
COLCA2-207ENST00000639470 C11orf53Q8IXP5 236 aa13.62□□□□□ -0.23
COLCA2-207ENST00000639470 PARP8Q8N3A8 854 aa13.62□□□□□ -0.23
COLCA2-207ENST00000639470 GCSAMQ8N6F7 178 aa13.62□□□□□ -0.23
COLCA2-207ENST00000639470 OR11L1Q8NGX0 322 aa13.62□□□□□ -0.23
COLCA2-207ENST00000639470 ZFAND2BQ8WV99 257 aa13.62□□□□□ -0.23
COLCA2-207ENST00000639470 RNF133Q8WVZ7 376 aa13.62□□□□□ -0.23
COLCA2-207ENST00000639470 RAB40AQ8WXH6 277 aa13.62□□□□□ -0.23
COLCA2-207ENST00000639470 SPSB4Q96A44 273 aa13.62□□□□□ -0.23
COLCA2-207ENST00000639470 REEP6Q96HR9 211 aa13.62□□□□□ -0.23
COLCA2-207ENST00000639470 TECTBQ96PL2 329 aa13.62□□□□□ -0.23
COLCA2-207ENST00000639470 NUDT16L1Q9BRJ7 211 aaKnown RBP13.62□□□□□ -0.23
COLCA2-207ENST00000639470 TTTY10Q9BZA0 68 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms