RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 OOEPA6NGQ2 149 aa11.25□□□□□ -0.61
SNX1-214ENST00000625244 C12orf71A8MTZ7 269 aa11.25□□□□□ -0.61
SNX1-214ENST00000625244 CXCR6O00574 342 aa11.25□□□□□ -0.61
SNX1-214ENST00000625244 GYG2O15488 501 aa11.25□□□□□ -0.61
SNX1-214ENST00000625244 NDUFA2O43678 99 aa11.25□□□□□ -0.61
SNX1-214ENST00000625244 CHP2O43745 196 aa11.25□□□□□ -0.61
SNX1-214ENST00000625244 ATP5HO75947 161 aa11.25□□□□□ -0.61
SNX1-214ENST00000625244 KDELR2P33947 212 aa11.25□□□□□ -0.61
SNX1-214ENST00000625244 AQP2P41181 271 aa11.25□□□□□ -0.61
SNX1-214ENST00000625244 CD200P41217 278 aa11.25□□□□□ -0.61
SNX1-214ENST00000625244 BMXP51813 675 aa11.25□□□□□ -0.61
SNX1-214ENST00000625244 UBE2E1P51965 193 aa11.25□□□□□ -0.61
SNX1-214ENST00000625244 PRSS12P56730 875 aa11.25□□□□□ -0.61
SNX1-214ENST00000625244 CBX1P83916 185 aa11.25□□□□□ -0.61
SNX1-214ENST00000625244 ACSM1Q08AH1 577 aa11.25□□□□□ -0.61
SNX1-214ENST00000625244 TTC33Q6PID6 262 aaPredicted RBP11.25□□□□□ -0.61
SNX1-214ENST00000625244 HDDC2Q7Z4H3 204 aa11.25□□□□□ -0.61
SNX1-214ENST00000625244 SYT9Q86SS6 491 aa11.25□□□□□ -0.61
SNX1-214ENST00000625244 FAM90A1Q86YD7 464 aa11.25□□□□□ -0.61
SNX1-214ENST00000625244 CMTM4Q8IZR5 234 aa11.25□□□□□ -0.61
SNX1-214ENST00000625244 RNF148Q8N7C7 305 aa11.25□□□□□ -0.61
SNX1-214ENST00000625244 CELF2-AS1Q8N7Q2 184 aa11.25□□□□□ -0.61
SNX1-214ENST00000625244 PIFOQ8TCI5 191 aa11.25□□□□□ -0.61
SNX1-214ENST00000625244 DPF1Q92782 380 aa11.25□□□□□ -0.61
SNX1-214ENST00000625244 C1orf21Q9H246 121 aa11.25□□□□□ -0.61
SNX1-214ENST00000625244 WDR76Q9H967 626 aa11.25□□□□□ -0.61
SNX1-214ENST00000625244 EMC7Q9NPA0 242 aa11.25□□□□□ -0.61
SNX1-214ENST00000625244 INIPQ9NRY2 104 aa11.25□□□□□ -0.61
SNX1-214ENST00000625244 MAGEL2Q9UJ55 1249 aa11.25□□□□□ -0.61
SNX1-214ENST00000625244 PRPF19Q9UMS4 504 aaKnown RBP11.25□□□□□ -0.61
SNX1-214ENST00000625244 ALMS1Q8TCU4 4167 aa11.25□□□□□ -0.61
SNX1-214ENST00000625244 A0A1W2PPL8 197 aa11.24□□□□□ -0.61
SNX1-214ENST00000625244 SGCEO43556 437 aa11.24□□□□□ -0.61
SNX1-214ENST00000625244 DBHP09172 617 aa11.24□□□□□ -0.61
SNX1-214ENST00000625244 CCDC159P0C7I6 412 aa11.24□□□□□ -0.61
SNX1-214ENST00000625244 HSD17B1P14061 328 aa11.24□□□□□ -0.61
SNX1-214ENST00000625244 MSR1P21757 451 aa11.24□□□□□ -0.61
SNX1-214ENST00000625244 IFNA8P32881 189 aa11.24□□□□□ -0.61
SNX1-214ENST00000625244 ELF3P78545 371 aaPredicted RBP11.24□□□□□ -0.61
SNX1-214ENST00000625244 CYBRD1Q53TN4 286 aa11.24□□□□□ -0.61
SNX1-214ENST00000625244 ZNF613Q6PF04 617 aa11.24□□□□□ -0.61
SNX1-214ENST00000625244 MOSPD2Q8NHP6 518 aa11.24□□□□□ -0.61
SNX1-214ENST00000625244 TAMM41Q96BW9 452 aa11.24□□□□□ -0.61
SNX1-214ENST00000625244 RASD2Q96D21 266 aa11.24□□□□□ -0.61
SNX1-214ENST00000625244 TPD52L3Q96J77 140 aa11.24□□□□□ -0.61
SNX1-214ENST00000625244 MCHR1Q99705 422 aa11.24□□□□□ -0.61
SNX1-214ENST00000625244 MEGF9Q9H1U4 602 aa11.24□□□□□ -0.61
SNX1-214ENST00000625244 PALMDQ9NP74 551 aa11.24□□□□□ -0.61
SNX1-214ENST00000625244 RPS6KA6Q9UK32 745 aa11.24□□□□□ -0.61
SNX1-214ENST00000625244 LSM4Q9Y4Z0 139 aaKnown RBP11.24□□□□□ -0.61
SNX1-214ENST00000625244 IGHV3OR15-7A0A075B7D8 119 aa11.23□□□□□ -0.61
SNX1-214ENST00000625244 CPSF4LA6NMK7 179 aaKnown RBP11.23□□□□□ -0.61
SNX1-214ENST00000625244 M0R3H8 397 aa11.23□□□□□ -0.61
SNX1-214ENST00000625244 PEX14O75381 377 aa11.23□□□□□ -0.61
SNX1-214ENST00000625244 ZNF682O95780 498 aa11.23□□□□□ -0.61
SNX1-214ENST00000625244 T-ENOLP0DO92 83 aa11.23□□□□□ -0.61
SNX1-214ENST00000625244 CD247P20963 164 aa11.23□□□□□ -0.61
SNX1-214ENST00000625244 GUCA1AP43080 201 aaPredicted RBP11.23□□□□□ -0.61
SNX1-214ENST00000625244 RGS6P49758 472 aa11.23□□□□□ -0.61
SNX1-214ENST00000625244 DUSP7Q16829 419 aa11.23□□□□□ -0.61
SNX1-214ENST00000625244 GLYATQ6IB77 296 aa11.23□□□□□ -0.61
SNX1-214ENST00000625244 LIAT1Q6ZQX7 453 aa11.23□□□□□ -0.61
SNX1-214ENST00000625244 FKBP9P1Q75LS8 142 aa11.23□□□□□ -0.61
SNX1-214ENST00000625244 C8orf46Q8TAG6 207 aa11.23□□□□□ -0.61
SNX1-214ENST00000625244 CDCA4Q9BXL8 241 aa11.23□□□□□ -0.61
SNX1-214ENST00000625244 MEPEQ9NQ76 525 aaPredicted RBP11.23□□□□□ -0.61
SNX1-214ENST00000625244 POLE4Q9NR33 117 aa11.23□□□□□ -0.61
SNX1-214ENST00000625244 STX18Q9P2W9 335 aaKnown RBP11.23□□□□□ -0.61
SNX1-214ENST00000625244 KAAG1Q9UBP8 84 aa11.23□□□□□ -0.61
SNX1-214ENST00000625244 SAMD4AQ9UPU9 718 aaKnown RBP11.23□□□□□ -0.61
SNX1-214ENST00000625244 SH3GLB1Q9Y371 365 aa11.23□□□□□ -0.61
SNX1-214ENST00000625244 SNX13Q9Y5W8 968 aa11.23□□□□□ -0.61
SNX1-214ENST00000625244 J3QW42 95 aa11.22□□□□□ -0.61
SNX1-214ENST00000625244 SERPINA1P01009 418 aa11.22□□□□□ -0.61
SNX1-214ENST00000625244 SELENOWP63302 87 aa11.22□□□□□ -0.61
SNX1-214ENST00000625244 SCRN3Q0VDG4 424 aa11.22□□□□□ -0.61
SNX1-214ENST00000625244 NPTX1Q15818 432 aa11.22□□□□□ -0.61
SNX1-214ENST00000625244 AANATQ16613 207 aa11.22□□□□□ -0.61
SNX1-214ENST00000625244 TMEM95Q3KNT9 176 aa11.22□□□□□ -0.61
SNX1-214ENST00000625244 TCTEX1D4Q5JR98 221 aa11.22□□□□□ -0.61
SNX1-214ENST00000625244 ENTPD8Q5MY95 495 aa11.22□□□□□ -0.61
SNX1-214ENST00000625244 ZFAND6Q6FIF0 208 aa11.22□□□□□ -0.61
SNX1-214ENST00000625244 HCP5Q6MZN7 132 aa11.22□□□□□ -0.61
SNX1-214ENST00000625244 ADAMTSL5Q6ZMM2 481 aa11.22□□□□□ -0.61
SNX1-214ENST00000625244 Q6ZS46 218 aa11.22□□□□□ -0.61
SNX1-214ENST00000625244 CCDC121Q6ZUS5 278 aa11.22□□□□□ -0.61
SNX1-214ENST00000625244 TSPYL5Q86VY4 417 aaPredicted RBP11.22□□□□□ -0.61
SNX1-214ENST00000625244 LINC00482Q8N8I6 264 aa11.22□□□□□ -0.61
SNX1-214ENST00000625244 Q8NFD4 153 aa11.22□□□□□ -0.61
SNX1-214ENST00000625244 OR5AU1Q8NGC0 362 aa11.22□□□□□ -0.61
SNX1-214ENST00000625244 OR5L1Q8NGL2 311 aa11.22□□□□□ -0.61
SNX1-214ENST00000625244 MCUR1Q96AQ8 359 aa11.22□□□□□ -0.61
SNX1-214ENST00000625244 NSMCE2Q96MF7 247 aa11.22□□□□□ -0.61
SNX1-214ENST00000625244 RBP7Q96R05 134 aa11.22□□□□□ -0.61
SNX1-214ENST00000625244 THTPAQ9BU02 230 aa11.22□□□□□ -0.61
SNX1-214ENST00000625244 ZNF426Q9BUY5 554 aa11.22□□□□□ -0.61
SNX1-214ENST00000625244 ALG12Q9BV10 488 aa11.22□□□□□ -0.61
SNX1-214ENST00000625244 GPR61Q9BZJ8 451 aa11.22□□□□□ -0.61
SNX1-214ENST00000625244 MUC13Q9H3R2 512 aa11.22□□□□□ -0.61
SNX1-214ENST00000625244 TRIM36Q9NQ86 728 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms