RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 HAGHQ16775 308 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 SP6Q3SY56 376 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 OPN5Q6U736 354 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 SFTPA2Q8IWL1 248 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 ADAD2Q8NCV1 583 aaKnown RBP9.45□□□□□ -0.9
USB1-212ENST00000566082 VSTM2LQ96N03 204 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 SPIN2AQ99865 258 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 SPIN2BQ9BPZ2 258 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 ZCCHC4Q9H5U6 513 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 MMP24Q9Y5R2 645 aa9.45□□□□□ -0.9
USB1-212ENST00000566082 HEATR5BQ9P2D3 2071 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 PPP1R2P9O14990 202 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 EIF4E2O60573 245 aaKnown RBP9.44□□□□□ -0.9
USB1-212ENST00000566082 CNOT4O95628 575 aaKnown RBP9.44□□□□□ -0.9
USB1-212ENST00000566082 ZNF117Q03924 483 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 DLX2Q07687 328 aaPredicted RBP9.44□□□□□ -0.9
USB1-212ENST00000566082 MIDNQ504T8 468 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 PHF19Q5T6S3 580 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 PRAMEF20Q5VT98 475 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 ALKBH2Q6NS38 261 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 CLEC9AQ6UXN8 241 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 HIST2H3AQ71DI3 136 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 SSX9Q7RTT3 188 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 PLXDC1Q8IUK5 500 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 OR5L2Q8NGL0 311 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 ASB5Q8WWX0 329 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 SPTSSAQ969W0 71 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 RSPO3Q9BXY4 272 aaPredicted RBP9.44□□□□□ -0.9
USB1-212ENST00000566082 TLNRD1Q9H1K6 362 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 ICAM5Q9UMF0 924 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 WDR90Q96KV7 1748 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 ZSWIM8A7E2V4 1837 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 TSTD3H0UI37 97 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 GFERP55789 205 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 CLDN17P56750 224 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 RPS11P62280 158 aaKnown RBP eCLIP9.44□□□□□ -0.9
USB1-212ENST00000566082 HIST2H3PS2Q5TEC6 136 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 RPUSD3Q6P087 351 aaKnown RBP9.44□□□□□ -0.9
USB1-212ENST00000566082 UNQ9370/PRO34162Q6UXP9 181 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 ZNF707Q96C28 371 aaPredicted RBP9.44□□□□□ -0.9
USB1-212ENST00000566082 OR5B12Q96R08 314 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 NMNAT2Q9BZQ4 307 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 WWTR1Q9GZV5 400 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 MED9Q9NWA0 146 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 CTSFQ9UBX1 484 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 PADI1Q9ULC6 663 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 KCNS2Q9ULS6 477 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 VSIG4Q9Y279 399 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 A0A1W2PNR3 127 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 METTL12A8MUP2 240 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 TP53I11O14683 189 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 MBTPS2O43462 519 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 UPK3AO75631 287 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 BPNT1O95861 308 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 ARG1P05089 322 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 TBPP20226 339 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 KIR3DL2P43630 455 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 NPBWR1P48145 328 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 C17orf67Q0P5P2 114 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 IKZF1Q13422 519 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 GGTLC2Q14390 218 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 LDLRAD3Q86YD5 345 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 DTWD2Q8NBA8 298 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 PLPP5Q8NEB5 264 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 RXFP4Q8TDU9 374 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 ARHGAP5-AS1Q96IT6 56 aa9.44□□□□□ -0.9
USB1-212ENST00000566082 TRBV11-1A0A0K0K1C0 115 aa9.43□□□□□ -0.9
USB1-212ENST00000566082 E9PQ18 207 aa9.43□□□□□ -0.9
USB1-212ENST00000566082 ASCL1P50553 236 aa9.43□□□□□ -0.9
USB1-212ENST00000566082 TAF9Q16594 264 aa9.43□□□□□ -0.9
USB1-212ENST00000566082 RNF212Q495C1 297 aa9.43□□□□□ -0.9
USB1-212ENST00000566082 NPSR1Q6W5P4 371 aa9.43□□□□□ -0.9
USB1-212ENST00000566082 OR13C8Q8NGS7 320 aa9.43□□□□□ -0.9
USB1-212ENST00000566082 OR2G3Q8NGZ4 309 aa9.43□□□□□ -0.9
USB1-212ENST00000566082 RGP1Q92546 391 aaPredicted RBP9.43□□□□□ -0.9
USB1-212ENST00000566082 EMG1Q92979 244 aaKnown RBP9.43□□□□□ -0.9
USB1-212ENST00000566082 NIPSNAP3BQ9BS92 247 aa9.43□□□□□ -0.9
USB1-212ENST00000566082 NPTNQ9Y639 398 aa9.43□□□□□ -0.9
USB1-212ENST00000566082 HSPB6O14558 160 aa9.43□□□□□ -0.9
USB1-212ENST00000566082 ST8SIA3O43173 380 aa9.43□□□□□ -0.9
USB1-212ENST00000566082 IL33O95760 270 aa9.43□□□□□ -0.9
USB1-212ENST00000566082 TNFRSF4P43489 277 aa9.43□□□□□ -0.9
USB1-212ENST00000566082 GUK1Q16774 197 aa9.43□□□□□ -0.9
USB1-212ENST00000566082 PCK2Q16822 640 aa9.43□□□□□ -0.9
USB1-212ENST00000566082 MOGAT2Q3SYC2 334 aa9.43□□□□□ -0.9
USB1-212ENST00000566082 SLC22A25Q6T423 547 aa9.43□□□□□ -0.9
USB1-212ENST00000566082 ATG4DQ86TL0 474 aaPredicted RBP9.43□□□□□ -0.9
USB1-212ENST00000566082 SLC25A42Q86VD7 318 aa9.43□□□□□ -0.9
USB1-212ENST00000566082 ARRDC1Q8N5I2 433 aa9.43□□□□□ -0.9
USB1-212ENST00000566082 STT3BQ8TCJ2 826 aa9.43□□□□□ -0.9
USB1-212ENST00000566082 C11orf40Q8WZ69 217 aa9.43□□□□□ -0.9
USB1-212ENST00000566082 PIK3IP1Q96FE7 263 aa9.43□□□□□ -0.9
USB1-212ENST00000566082 MRGPRX1Q96LB2 322 aa9.43□□□□□ -0.9
USB1-212ENST00000566082 SGCZQ96LD1 299 aa9.43□□□□□ -0.9
USB1-212ENST00000566082 MRPS18BQ9Y676 258 aaKnown RBP9.43□□□□□ -0.9
USB1-212ENST00000566082 SHISA8B8ZZ34 492 aa9.43□□□□□ -0.9
USB1-212ENST00000566082 GLULP15104 373 aa9.43□□□□□ -0.9
USB1-212ENST00000566082 CDAP32320 146 aa9.43□□□□□ -0.9
USB1-212ENST00000566082 CTHP32929 405 aa9.43□□□□□ -0.9
USB1-212ENST00000566082 VEGFBP49765 207 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms