RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 SOX21Q9Y651 276 aaPredicted RBP10.49□□□□□ -0.73
SMAD3-208ENST00000558827 PPIAL4EA0A075B759 164 aa10.48□□□□□ -0.73
SMAD3-208ENST00000558827 A6NLC8 198 aa10.48□□□□□ -0.73
SMAD3-208ENST00000558827 LRRC30A6NM36 301 aa10.48□□□□□ -0.73
SMAD3-208ENST00000558827 PPIAL4DF5H284 164 aa10.48□□□□□ -0.73
SMAD3-208ENST00000558827 PSMD9O00233 223 aa10.48□□□□□ -0.73
SMAD3-208ENST00000558827 MRPL3P09001 348 aaKnown RBP10.48□□□□□ -0.73
SMAD3-208ENST00000558827 H2BFMP0C1H6 154 aa10.48□□□□□ -0.73
SMAD3-208ENST00000558827 PPIAL4FP0DN26 164 aa10.48□□□□□ -0.73
SMAD3-208ENST00000558827 PAICSP22234 425 aaKnown RBP10.48□□□□□ -0.73
SMAD3-208ENST00000558827 OTX1P32242 354 aaPredicted RBP10.48□□□□□ -0.73
SMAD3-208ENST00000558827 DAPP51397 102 aa10.48□□□□□ -0.73
SMAD3-208ENST00000558827 ZNF121P58317 390 aaPredicted RBP10.48□□□□□ -0.73
SMAD3-208ENST00000558827 CDK5Q00535 292 aa10.48□□□□□ -0.73
SMAD3-208ENST00000558827 BNIP1Q12981 228 aa10.48□□□□□ -0.73
SMAD3-208ENST00000558827 ESCO2Q56NI9 601 aa10.48□□□□□ -0.73
SMAD3-208ENST00000558827 TEX30Q5JUR7 227 aa10.48□□□□□ -0.73
SMAD3-208ENST00000558827 SLC16A9Q7RTY1 509 aa10.48□□□□□ -0.73
SMAD3-208ENST00000558827 C1QL2Q7Z5L3 287 aa10.48□□□□□ -0.73
SMAD3-208ENST00000558827 BCDIN3DQ7Z5W3 292 aaKnown RBP10.48□□□□□ -0.73
SMAD3-208ENST00000558827 AMIGO2Q86SJ2 522 aa10.48□□□□□ -0.73
SMAD3-208ENST00000558827 KLBQ86Z14 1044 aa10.48□□□□□ -0.73
SMAD3-208ENST00000558827 TIGD4Q8IY51 512 aa10.48□□□□□ -0.73
SMAD3-208ENST00000558827 BCL6BQ8N143 479 aaPredicted RBP10.48□□□□□ -0.73
SMAD3-208ENST00000558827 OR11L1Q8NGX0 322 aa10.48□□□□□ -0.73
SMAD3-208ENST00000558827 NANPQ8TBE9 248 aa10.48□□□□□ -0.73
SMAD3-208ENST00000558827 POP5Q969H6 163 aaKnown RBP10.48□□□□□ -0.73
SMAD3-208ENST00000558827 PGAM5Q96HS1 289 aa10.48□□□□□ -0.73
SMAD3-208ENST00000558827 RASSF4Q9H2L5 321 aa10.48□□□□□ -0.73
SMAD3-208ENST00000558827 YY1AP1Q9H869 796 aa10.48□□□□□ -0.73
SMAD3-208ENST00000558827 C1orf123Q9NWV4 160 aa10.48□□□□□ -0.73
SMAD3-208ENST00000558827 KIF17Q9P2E2 1029 aa10.48□□□□□ -0.73
SMAD3-208ENST00000558827 PPIAL4AQ9Y536 164 aa10.48□□□□□ -0.73
SMAD3-208ENST00000558827 IGHV3OR15-7A0A075B7D8 119 aa10.47□□□□□ -0.73
SMAD3-208ENST00000558827 hCG_1807616A0A1W2PRN6 198 aa10.47□□□□□ -0.73
SMAD3-208ENST00000558827 ARRDC5A6NEK1 342 aa10.47□□□□□ -0.73
SMAD3-208ENST00000558827 F5H0A9 414 aaPredicted RBP10.47□□□□□ -0.73
SMAD3-208ENST00000558827 HMGN1P05114 100 aa10.47□□□□□ -0.73
SMAD3-208ENST00000558827 ANXA8P13928 327 aa10.47□□□□□ -0.73
SMAD3-208ENST00000558827 CD200P41217 278 aa10.47□□□□□ -0.73
SMAD3-208ENST00000558827 SLC15A1P46059 708 aa10.47□□□□□ -0.73
SMAD3-208ENST00000558827 GMFBP60983 142 aa10.47□□□□□ -0.73
SMAD3-208ENST00000558827 GRB2P62993 217 aaKnown RBP10.47□□□□□ -0.73
SMAD3-208ENST00000558827 ELF3P78545 371 aaPredicted RBP10.47□□□□□ -0.73
SMAD3-208ENST00000558827 ZNF154Q13106 437 aa10.47□□□□□ -0.73
SMAD3-208ENST00000558827 APOFQ13790 326 aa10.47□□□□□ -0.73
SMAD3-208ENST00000558827 SNAPC1Q16533 368 aa10.47□□□□□ -0.73
SMAD3-208ENST00000558827 LRRN1Q6UXK5 716 aa10.47□□□□□ -0.73
SMAD3-208ENST00000558827 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.47□□□□□ -0.73
SMAD3-208ENST00000558827 MUC20Q8N307 709 aaPredicted RBP10.47□□□□□ -0.73
SMAD3-208ENST00000558827 BPIFB2Q8N4F0 458 aa10.47□□□□□ -0.73
SMAD3-208ENST00000558827 PAPD5Q8NDF8 572 aaKnown RBP10.47□□□□□ -0.73
SMAD3-208ENST00000558827 ZNF418Q8TF45 676 aaPredicted RBP10.47□□□□□ -0.73
SMAD3-208ENST00000558827 RNF133Q8WVZ7 376 aa10.47□□□□□ -0.73
SMAD3-208ENST00000558827 REEP6Q96HR9 211 aa10.47□□□□□ -0.73
SMAD3-208ENST00000558827 DUX5Q96PT3 197 aa10.47□□□□□ -0.73
SMAD3-208ENST00000558827 SSBP3Q9BWW4 388 aaPredicted RBP10.47□□□□□ -0.73
SMAD3-208ENST00000558827 MMADHCQ9H3L0 296 aaPredicted RBP10.47□□□□□ -0.73
SMAD3-208ENST00000558827 AUP1Q9Y679 476 aa10.47□□□□□ -0.73
SMAD3-208ENST00000558827 ANKRD30BLA7E2S9 258 aa10.46□□□□□ -0.73
SMAD3-208ENST00000558827 J3QLI3 93 aa10.46□□□□□ -0.73
SMAD3-208ENST00000558827 LYNP07948 512 aa10.46□□□□□ -0.73
SMAD3-208ENST00000558827 ZNF12P17014 697 aa10.46□□□□□ -0.73
SMAD3-208ENST00000558827 EPHA2P29317 976 aa10.46□□□□□ -0.73
SMAD3-208ENST00000558827 OPRL1P41146 370 aa10.46□□□□□ -0.73
SMAD3-208ENST00000558827 BLVRAP53004 296 aa10.46□□□□□ -0.73
SMAD3-208ENST00000558827 CRISP1P54107 249 aa10.46□□□□□ -0.73
SMAD3-208ENST00000558827 GNB2P62879 340 aa10.46□□□□□ -0.73
SMAD3-208ENST00000558827 FAM3AP98173 230 aa10.46□□□□□ -0.73
SMAD3-208ENST00000558827 GK3PQ14409 553 aa10.46□□□□□ -0.73
SMAD3-208ENST00000558827 OR8B8Q15620 311 aa10.46□□□□□ -0.73
SMAD3-208ENST00000558827 ZNF404Q494X3 552 aa10.46□□□□□ -0.73
SMAD3-208ENST00000558827 DMRTC1Q5HYR2 192 aa10.46□□□□□ -0.73
SMAD3-208ENST00000558827 KLF17Q5JT82 389 aaPredicted RBP10.46□□□□□ -0.73
SMAD3-208ENST00000558827 SHFQ7M4L6 423 aa10.46□□□□□ -0.73
SMAD3-208ENST00000558827 C1orf87Q8N0U7 546 aa10.46□□□□□ -0.73
SMAD3-208ENST00000558827 UTP4Q969X6 686 aaKnown RBP10.46□□□□□ -0.73
SMAD3-208ENST00000558827 NEIL1Q96FI4 390 aaPredicted RBP10.46□□□□□ -0.73
SMAD3-208ENST00000558827 MARCH7Q9H992 704 aa10.46□□□□□ -0.73
SMAD3-208ENST00000558827 FN3KRPQ9HA64 309 aa10.46□□□□□ -0.73
SMAD3-208ENST00000558827 PAPOLBQ9NRJ5 636 aaKnown RBP10.46□□□□□ -0.73
SMAD3-208ENST00000558827 RNF7Q9UBF6 113 aa10.46□□□□□ -0.73
SMAD3-208ENST00000558827 ZNF69Q9UC07 566 aa10.46□□□□□ -0.73
SMAD3-208ENST00000558827 OR5V1Q9UGF6 321 aa10.46□□□□□ -0.73
SMAD3-208ENST00000558827 INSIG2Q9Y5U4 225 aa10.46□□□□□ -0.73
SMAD3-208ENST00000558827 A0A1B0GWJ7 208 aa10.45□□□□□ -0.74
SMAD3-208ENST00000558827 IFNL4K9M1U5 179 aa10.45□□□□□ -0.74
SMAD3-208ENST00000558827 MAGEB4O15481 346 aaPredicted RBP10.45□□□□□ -0.74
SMAD3-208ENST00000558827 XRCC2O43543 280 aa10.45□□□□□ -0.74
SMAD3-208ENST00000558827 PRKYO43930 277 aa10.45□□□□□ -0.74
SMAD3-208ENST00000558827 GYPAP02724 150 aa10.45□□□□□ -0.74
SMAD3-208ENST00000558827 EGR1P18146 543 aa10.45□□□□□ -0.74
SMAD3-208ENST00000558827 PITPNBP48739 271 aa10.45□□□□□ -0.74
SMAD3-208ENST00000558827 GSK3AP49840 483 aa10.45□□□□□ -0.74
SMAD3-208ENST00000558827 CSNK2BP67870 215 aa10.45□□□□□ -0.74
SMAD3-208ENST00000558827 ARMCX4Q5H9R4 360 aa10.45□□□□□ -0.74
SMAD3-208ENST00000558827 C1orf146Q5VVC0 180 aa10.45□□□□□ -0.74
SMAD3-208ENST00000558827 PRSS45Q7RTY3 260 aa10.45□□□□□ -0.74
SMAD3-208ENST00000558827 WDR86Q86TI4 376 aa10.45□□□□□ -0.74
SMAD3-208ENST00000558827 FGFRL1Q8N441 504 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms