RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 OR1L6Q8NGR2 347 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 OR6K2Q8NGY2 324 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 OR52E5Q8NH55 327 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 SNIP1Q8TAD8 396 aaKnown RBP6.72□□□□□ -1.33
HDAC3-216ENST00000523088 ARRDC2Q8TBH0 407 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 ESAMQ96AP7 390 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 LGALS12Q96DT0 336 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 ELMOD3Q96FG2 381 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 SCRN2Q96FV2 425 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 BMFQ96LC9 184 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 VSTM2LQ96N03 204 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 SIGMAR1Q99720 223 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 SNRNP25Q9BV90 132 aaKnown RBP6.72□□□□□ -1.33
HDAC3-216ENST00000523088 PBDC1Q9BVG4 233 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 PDFQ9HBH1 243 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 LRTM1Q9HBL6 345 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 SLAMF7Q9NQ25 335 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 C1GALT1Q9NS00 363 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 ZNF629Q9UEG4 869 aaPredicted RBP6.72□□□□□ -1.33
HDAC3-216ENST00000523088 LRP12Q9Y561 859 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 ZFHX4Q86UP3 3567 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 ASXL3Q9C0F0 2248 aa6.72□□□□□ -1.33
HDAC3-216ENST00000523088 ZFC3H1O60293 1989 aaKnown RBP6.71□□□□□ -1.33
HDAC3-216ENST00000523088 LAMA5O15230 3695 aa6.71□□□□□ -1.33
HDAC3-216ENST00000523088 A0A0G2JND7 137 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 C7orf66A4D0T2 115 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 RCCD1A6NED2 376 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 ZNF724A8MTY0 619 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 LMO7DNF2Z398 122 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 K7ESM1 405 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 RS1O15537 224 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 OR7C2O60412 319 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 CFDP00746 253 aaPredicted RBP6.71□□□□□ -1.34
HDAC3-216ENST00000523088 AMBPP02760 352 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 TYMSP04818 313 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 ISG15P05161 165 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 FABP3P05413 133 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 UMODP07911 640 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 PPIAL4GP0DN37 164 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 CELP19835 753 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 ACHEP22303 614 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 CMPK1P30085 196 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 MIPP30301 263 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 IL2RGP31785 369 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 CFHR2P36980 270 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 RAG2P55895 527 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 CLDN2P57739 230 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 PSMA6P60900 246 aaKnown RBP6.71□□□□□ -1.34
HDAC3-216ENST00000523088 ERVK11-1P61568 191 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 STXBP1P61764 594 aaKnown RBP6.71□□□□□ -1.34
HDAC3-216ENST00000523088 SELENOWP63302 87 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 ACVR1Q04771 509 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 CD47Q08722 323 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 TMEM115Q12893 351 aaPredicted RBP6.71□□□□□ -1.34
HDAC3-216ENST00000523088 EIF3IQ13347 325 aaKnown RBP6.71□□□□□ -1.34
HDAC3-216ENST00000523088 NFATC4Q14934 902 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 EBPQ15125 230 aaKnown RBP6.71□□□□□ -1.34
HDAC3-216ENST00000523088 RHEBQ15382 184 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 CPSF6Q16630 551 aaKnown RBP eCLIP6.71□□□□□ -1.34
HDAC3-216ENST00000523088 ELOA3BQ3SY89 546 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 WIPI1Q5MNZ9 446 aaPredicted RBP6.71□□□□□ -1.34
HDAC3-216ENST00000523088 SLC22A10Q63ZE4 541 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 WDR25Q64LD2 544 aaPredicted RBP6.71□□□□□ -1.34
HDAC3-216ENST00000523088 OR52W1Q6IF63 320 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 ENPP6Q6UWR7 440 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 ZDHHC24Q6UX98 284 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 ZNF571Q7Z3V5 609 aaPredicted RBP6.71□□□□□ -1.34
HDAC3-216ENST00000523088 CPEB2Q7Z5Q1 589 aaKnown RBP6.71□□□□□ -1.34
HDAC3-216ENST00000523088 B3GNT8Q7Z7M8 397 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 GKN2Q86XP6 184 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 CBLN2Q8IUK8 224 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 IGDCC3Q8IVU1 814 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 KLHDC8BQ8IXV7 354 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 JAGN1Q8N5M9 183 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 ELOA3Q8NG57 546 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 OR10AD1Q8NGE0 317 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 OCC1Q8TAD7 63 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 LGALS14Q8TCE9 139 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 ZNF480Q8WV37 535 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 FCGR1BQ92637 280 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 KLK6Q92876 244 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 FGF11Q92914 225 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 ART4Q93070 314 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 TRMT61AQ96FX7 289 aaKnown RBP6.71□□□□□ -1.34
HDAC3-216ENST00000523088 SLC35E1Q96K37 410 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 CXorf58Q96LI9 332 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 MS4A4EQ96PG1 132 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 SYT3Q9BQG1 590 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 RAB11FIP5Q9BXF6 653 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 ALG9Q9H6U8 611 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 MANSC1Q9H8J5 431 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 PLEKHA1Q9HB21 404 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 Q9N2K0 584 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 LYRM2Q9NU23 88 aaPredicted RBP6.71□□□□□ -1.34
HDAC3-216ENST00000523088 RBFOX1Q9NWB1 397 aaKnown RBP6.71□□□□□ -1.34
HDAC3-216ENST00000523088 MRPL27Q9P0M9 148 aaKnown RBP6.71□□□□□ -1.34
HDAC3-216ENST00000523088 LHX3Q9UBR4 397 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 A4GNTQ9UNA3 340 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 SLC17A4Q9Y2C5 497 aa6.71□□□□□ -1.34
HDAC3-216ENST00000523088 UFC1Q9Y3C8 167 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms