RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-208	ENST00000436638	ABLIM2	Q6H8Q1	611 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	RPL13AP3	Q6NVV1	102 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	NIPAL3	Q6P499	406 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	VWA1	Q6PCB0	445 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	XKRX	Q6PP77	449 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	LRRN1	Q6UXK5	716 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	CASP12	Q6UXS9	341 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	RBPMS2	Q6ZRY4	209 aa	Known RBP	5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	SEM1	Q6ZVN7	128 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	TMPRSS11F	Q6ZWK6	438 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	SLC35D2	Q76EJ3	337 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	AAED1	Q7RTV5	226 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	SLC46A3	Q7Z3Q1	461 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	MRGPRG	Q86SM5	289 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	MEX3D	Q86XN8	651 aa	Known RBP	5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	ZNF808	Q8N4W9	903 aa	Predicted RBP	5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	FAM89B	Q8N5H3	189 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	LINC00482	Q8N8I6	264 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	OR10H4	Q8NGA5	316 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	OR9Q2	Q8NGE9	314 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	OR52L1	Q8NGH7	329 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	OR6K3	Q8NGY3	331 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	OR51A7	Q8NH64	312 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	NEK7	Q8TDX7	302 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	GPX8	Q8TED1	209 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	CACNG8	Q8WXS5	425 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	DNAJC9	Q8WXX5	260 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	AP3S1	Q92572	193 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	APH1A	Q96BI3	265 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	SAT2	Q96F10	170 aa	Predicted RBP	5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	PERP	Q96FX8	193 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	BSCL2	Q96G97	398 aa	Predicted RBP	5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	MRPL48	Q96GC5	212 aa	Known RBP	5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	PACRG	Q96M98	296 aa	Predicted RBP	5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	TNFRSF13C	Q96RJ3	184 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	TEAD3	Q99594	435 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	ALKBH7	Q9BT30	221 aa	Predicted RBP	5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	ANKRD60	Q9BZ19	345 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	CCDC90B	Q9GZT6	254 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	SLITRK2	Q9H156	845 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	SEMA6A	Q9H2E6	1030 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	NARFL	Q9H6Q4	476 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	RANBP3	Q9H6Z4	567 aa	Predicted RBP	5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	BCO1	Q9HAY6	547 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	B3GAT2	Q9NPZ5	323 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	GSN-AS1	Q9NRJ2	163 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	PCDHB16	Q9NRJ7	776 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	SDHAF2	Q9NX18	166 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	VNN3	Q9NY84	501 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	COA4	Q9NYJ1	87 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	UPB1	Q9UBR1	384 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	ZNF629	Q9UEG4	869 aa	Predicted RBP	5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638		Q9UFV3	132 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	MGAT4A	Q9UM21	535 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	RNF6	Q9Y252	685 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	ORC6	Q9Y5N6	252 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	COL6A6	A6NMZ7	2263 aa		5.43	□□□□□ -1.54
ECHDC1-208	ENST00000436638	FRY	Q5TBA9	3013 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	SHANK1	Q9Y566	2161 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	FREM2	Q5SZK8	3169 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	ZNF407	Q9C0G0	2248 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	USP24	Q9UPU5	2620 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	IGKV3D-15	A0A087WSY6	115 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	TRAV27	A0A087WT01	109 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638		A0A1B0GV90	55 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	LOC102725191	A0A1B0GVB3	256 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	ARRDC5	A6NEK1	342 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	METTL15	A6NJ78	407 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	SAC3D1	A6NKF1	404 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	FAM25A	B3EWG3	89 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	FAM25C	B3EWG5	89 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	FAM25G	B3EWG6	89 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	ZNF814	B7Z6K7	855 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	MS4A18	H0YCH9	400 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638		H3BN98	237 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638		H3BNX3	289 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	XKRY	O14609	159 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	ZG16	O60844	167 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	SLC43A1	O75387	559 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	SAP30	O75446	220 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	TOX	O94900	526 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	CLDN14	O95500	239 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	GAST	P01350	101 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	CD36	P16671	472 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	CDH2	P19022	906 aa	Predicted RBP	5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	KLK2	P20151	261 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	AGA	P20933	346 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	PRKACG	P22612	351 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	LAP3	P28838	519 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	AGTR1	P30556	359 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	KCNJ3	P48549	501 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	MTNR1B	P49286	362 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	DAP3	P51398	398 aa	Known RBP	5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	CDH15	P55291	814 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	BID	P55957	195 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	CTXN1	P60606	82 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	ESRRG	P62508	458 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	ADORA2A-AS1	P86434	159 aa		5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	RPL18	Q07020	188 aa	Known RBP	5.42	□□□□□ -1.54
ECHDC1-208	ENST00000436638	FOXF2	Q12947	444 aa		5.42	□□□□□ -1.54

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