RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 P06335 190 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 PlgP20918 812 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Mmp2P33434 662 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 HbegfQ06186 208 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Nkx6-3Q3UHX8 262 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 4930512M02RikQ5SQK8 218 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Olfr429Q7TRW1 312 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Zfp286Q8C0E6 519 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Mfsd9Q8C0T7 466 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Egln3Q91UZ4 239 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Cdc42ep3Q9CQC5 254 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Dnmt3lQ9CWR8 421 aaKnown RBP12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Bex3Q9WTZ9 124 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Ch25hQ9Z0F5 298 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Muc3E9PWP7 378 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Vmn1r152E9Q9N3 307 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Vmn1r104L7N293 307 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Nxt2Q3UNA4 142 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Zfp975Q6NVD6 525 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Slc26a11Q80ZD3 593 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 B3galnt1Q920V1 331 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 FaimQ9WUD8 179 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Pmm2Q9Z2M7 242 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Gm17655A0A1B0GT13 591 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Gpld1O70362 837 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Lin7bO88951 207 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Rab6aP35279 208 aaKnown RBP12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Rps10P63325 165 aaKnown RBP12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Lin28bQ45KJ6 247 aaKnown RBP12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Xkr7Q5GH64 580 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Vezf1Q5SXC4 518 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Olfr1321Q7TQW4 319 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Olfr116Q923Q6 321 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Q9CQT6 229 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Tmem186Q9CR76 216 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Rgs11Q9Z2H1 443 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 KcpQ3U492 1550 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Trav15d-1-dv6d-1A0A075B624 124 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Olfr225E9PWF9 419 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Olfr1471F6QVZ8 314 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Prph2P15499 346 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 FahP35505 419 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Nkx2-2P42586 273 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 CycsP62897 105 aaKnown RBP12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 MakQ04859 622 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Fam187bQ0VAY3 358 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Gm773Q3TML4 206 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Kcmf1Q80UY2 381 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Syt17Q920M7 470 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Bpnt1Q9Z0S1 308 aa12.61□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 IqckD3YYL3 290 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Lipo5F6QKH6 233 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Il7rP16872 459 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Cd40P27512 289 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Ceacam1P31809 521 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Prg2Q61878 223 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Lmf2Q8C3X8 702 aaKnown RBP12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Srpx2Q8R054 468 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Lrrc3bQ8VCH9 259 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Olfr1501Q8VFQ3 315 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Olfr1489Q8VFQ5 313 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 2210010C04RikQ9CPN9 247 aaKnown RBP12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Keg1Q9DCY0 295 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Mmp1aQ9EPL5 464 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Klk1b11P15946 261 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Rce1P57791 329 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Rpl27P61358 136 aaKnown RBP12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Prss57Q14B24 284 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Olfr775Q7TRI4 312 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Zfp819Q80V81 607 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Zfp955aQ80XR7 545 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Wbp1lQ8BGW2 348 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Upp2Q8CGR7 320 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Zc3h3Q8CHP0 950 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 GcaQ8VC88 220 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Olfr1497Q8VG11 314 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Sectm1aQ921W8 192 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Letmd1Q924L1 360 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 P2ry14Q9ESG6 338 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Clec4eQ9R0Q8 214 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Cav2Q9WVC3 162 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Gm21970F6XX07 295 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Epha8O09127 1004 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Fosl2P47930 326 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Galr1P56479 348 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Anxa7Q07076 463 aaKnown RBP12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Olfr1428Q0VDY1 314 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Prss38Q3UKY7 322 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Fkbp10Q61576 581 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Flywch1Q8CI03 673 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Cmtm4Q8CJ61 208 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Olfr215Q8VF82 310 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Olfr1466Q8VFW4 310 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Olfr1257Q8VGP0 309 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 SlirpQ9D8T7 112 aaKnown RBP12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 HpgdsQ9JHF7 199 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Ralgapa2A3KGS3 1872 aa12.6□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Vmn2r76E9Q3F5 853 aa12.59□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 Smim18J3QNP2 93 aa12.59□□□□□ -0.39
Pcdha1-202ENSMUST00000193839 CtgfP29268 348 aa12.59□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 47.1 ms