Protein–RNA interactions for Protein: Q9CPN9

2210010C04Rik, RIKEN cDNA 2210010C04 gene, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
2210010C04RikQ9CPN9 Gm25239-201ENSMUST00000174915 86 ntBASIC30.55■■■□□ 2.48
2210010C04RikQ9CPN9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
2210010C04RikQ9CPN9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
2210010C04RikQ9CPN9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.5■■■□□ 2.15
2210010C04RikQ9CPN9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
2210010C04RikQ9CPN9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
2210010C04RikQ9CPN9 Psd-208ENSMUST00000224556 2034 ntBASIC27.61■■■□□ 2.01
2210010C04RikQ9CPN9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
2210010C04RikQ9CPN9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
2210010C04RikQ9CPN9 Gm15042-201ENSMUST00000120212 883 ntBASIC27.02■■□□□ 1.92
2210010C04RikQ9CPN9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
2210010C04RikQ9CPN9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
2210010C04RikQ9CPN9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
2210010C04RikQ9CPN9 Gm15045-201ENSMUST00000117359 883 ntBASIC26.54■■□□□ 1.84
2210010C04RikQ9CPN9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
2210010C04RikQ9CPN9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
2210010C04RikQ9CPN9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
2210010C04RikQ9CPN9 Gm24109-201ENSMUST00000175489 103 ntBASIC26.33■■□□□ 1.81
2210010C04RikQ9CPN9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.3■■□□□ 1.8
2210010C04RikQ9CPN9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
2210010C04RikQ9CPN9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
2210010C04RikQ9CPN9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
2210010C04RikQ9CPN9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
2210010C04RikQ9CPN9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
2210010C04RikQ9CPN9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
2210010C04RikQ9CPN9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
2210010C04RikQ9CPN9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
2210010C04RikQ9CPN9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
2210010C04RikQ9CPN9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
2210010C04RikQ9CPN9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
2210010C04RikQ9CPN9 Gm23366-201ENSMUST00000175022 89 ntBASIC25.49■■□□□ 1.67
2210010C04RikQ9CPN9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
2210010C04RikQ9CPN9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.47■■□□□ 1.67
2210010C04RikQ9CPN9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
2210010C04RikQ9CPN9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
2210010C04RikQ9CPN9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
2210010C04RikQ9CPN9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.38■■□□□ 1.65
2210010C04RikQ9CPN9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
2210010C04RikQ9CPN9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
2210010C04RikQ9CPN9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.26■■□□□ 1.63
2210010C04RikQ9CPN9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
2210010C04RikQ9CPN9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
2210010C04RikQ9CPN9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
2210010C04RikQ9CPN9 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.06■■□□□ 1.6
2210010C04RikQ9CPN9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
2210010C04RikQ9CPN9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
2210010C04RikQ9CPN9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.94■■□□□ 1.58
2210010C04RikQ9CPN9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC24.87■■□□□ 1.57
2210010C04RikQ9CPN9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
2210010C04RikQ9CPN9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
2210010C04RikQ9CPN9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.82■■□□□ 1.56
2210010C04RikQ9CPN9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
2210010C04RikQ9CPN9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
2210010C04RikQ9CPN9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
2210010C04RikQ9CPN9 Gm42596-201ENSMUST00000196305 1958 ntBASIC24.58■■□□□ 1.53
2210010C04RikQ9CPN9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
2210010C04RikQ9CPN9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
2210010C04RikQ9CPN9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
2210010C04RikQ9CPN9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
2210010C04RikQ9CPN9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
2210010C04RikQ9CPN9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
2210010C04RikQ9CPN9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
2210010C04RikQ9CPN9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC24.38■■□□□ 1.49
2210010C04RikQ9CPN9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24.35■■□□□ 1.49
2210010C04RikQ9CPN9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
2210010C04RikQ9CPN9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
2210010C04RikQ9CPN9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
2210010C04RikQ9CPN9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
2210010C04RikQ9CPN9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
2210010C04RikQ9CPN9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
2210010C04RikQ9CPN9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
2210010C04RikQ9CPN9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
2210010C04RikQ9CPN9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
2210010C04RikQ9CPN9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
2210010C04RikQ9CPN9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
2210010C04RikQ9CPN9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24.02■■□□□ 1.44
2210010C04RikQ9CPN9 Gm25238-201ENSMUST00000174914 89 ntBASIC24.02■■□□□ 1.44
2210010C04RikQ9CPN9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
2210010C04RikQ9CPN9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
2210010C04RikQ9CPN9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
2210010C04RikQ9CPN9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
2210010C04RikQ9CPN9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
2210010C04RikQ9CPN9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
2210010C04RikQ9CPN9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.89■■□□□ 1.41
2210010C04RikQ9CPN9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23.88■■□□□ 1.41
2210010C04RikQ9CPN9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
2210010C04RikQ9CPN9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
2210010C04RikQ9CPN9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
2210010C04RikQ9CPN9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
2210010C04RikQ9CPN9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC23.82■■□□□ 1.4
2210010C04RikQ9CPN9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
2210010C04RikQ9CPN9 Gm27325-201ENSMUST00000175467 74 ntBASIC23.75■■□□□ 1.39
2210010C04RikQ9CPN9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
2210010C04RikQ9CPN9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23.71■■□□□ 1.39
2210010C04RikQ9CPN9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
2210010C04RikQ9CPN9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
2210010C04RikQ9CPN9 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
2210010C04RikQ9CPN9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC23.61■■□□□ 1.37
2210010C04RikQ9CPN9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
2210010C04RikQ9CPN9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms