RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 PiguQ8K358 434 aa13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 Olfr56Q8VGD6 315 aa13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 Olfr1377Q8VGH1 307 aa13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 Ddah2Q99LD8 285 aa13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 Coq5Q9CXI0 327 aa13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 Elovl7Q9D2Y9 281 aa13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 Jam3Q9D8B7 310 aa13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 Mmp1bQ9EPL6 463 aa13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 Tlr1Q9EPQ1 795 aa13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 Stub1Q9WUD1 304 aa13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 Tsc22d3Q9Z2S7 137 aa13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 Abca4O35600 2310 aa13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 Cyp4a30bA0A087WS15 508 aa13.15□□□□□ -0.3
Nup88-202ENSMUST00000108530 Vmn1r67G5E8C1 305 aa13.15□□□□□ -0.3
Nup88-202ENSMUST00000108530 Vmn2r29L7N2D4 852 aa13.15□□□□□ -0.3
Nup88-202ENSMUST00000108530 Galr2O88854 371 aa13.15□□□□□ -0.3
Nup88-202ENSMUST00000108530 Prkar1bP12849 381 aa13.15□□□□□ -0.3
Nup88-202ENSMUST00000108530 P2rx1P51576 399 aa13.15□□□□□ -0.3
Nup88-202ENSMUST00000108530 Cav3P51637 151 aa13.15□□□□□ -0.3
Nup88-202ENSMUST00000108530 Olfr145Q60882 310 aa13.15□□□□□ -0.3
Nup88-202ENSMUST00000108530 Adam9Q61072 845 aa13.15□□□□□ -0.3
Nup88-202ENSMUST00000108530 HpQ61646 347 aa13.15□□□□□ -0.3
Nup88-202ENSMUST00000108530 Olfr988Q7TRA1 309 aa13.15□□□□□ -0.3
Nup88-202ENSMUST00000108530 Fbll1Q80WS3 314 aaKnown RBP13.15□□□□□ -0.3
Nup88-202ENSMUST00000108530 Ssuh2Q8C3L1 340 aa13.15□□□□□ -0.3
Nup88-202ENSMUST00000108530 Dcun1d5Q9CXV9 237 aa13.15□□□□□ -0.3
Nup88-202ENSMUST00000108530 Hcfc1r1Q9CYQ5 120 aa13.15□□□□□ -0.3
Nup88-202ENSMUST00000108530 SpastQ9QYY8 614 aa13.15□□□□□ -0.3
Nup88-202ENSMUST00000108530 Eml6Q5SQM0 1958 aa13.15□□□□□ -0.3
Nup88-202ENSMUST00000108530 Ndufaf6A2AIL4 333 aa13.15□□□□□ -0.3
Nup88-202ENSMUST00000108530 DytnA2CI98 653 aa13.15□□□□□ -0.3
Nup88-202ENSMUST00000108530 Tex28B1AYN9 409 aa13.15□□□□□ -0.3
Nup88-202ENSMUST00000108530 Bnip2O54940 326 aa13.15□□□□□ -0.3
Nup88-202ENSMUST00000108530 Cnpy1Q4VAB4 94 aa13.15□□□□□ -0.3
Nup88-202ENSMUST00000108530 Irgm1Q60766 409 aa13.15□□□□□ -0.3
Nup88-202ENSMUST00000108530 NppcQ61839 126 aa13.15□□□□□ -0.3
Nup88-202ENSMUST00000108530 Gm13757Q7TR17 305 aa13.15□□□□□ -0.3
Nup88-202ENSMUST00000108530 Frmd6Q8C0V9 622 aa13.15□□□□□ -0.3
Nup88-202ENSMUST00000108530 Adhfe1Q8R0N6 465 aa13.15□□□□□ -0.3
Nup88-202ENSMUST00000108530 Olfr919Q8VF78 315 aa13.15□□□□□ -0.3
Nup88-202ENSMUST00000108530 MallQ91X49 154 aa13.15□□□□□ -0.3
Nup88-202ENSMUST00000108530 Pnrc2Q9CR73 140 aa13.15□□□□□ -0.3
Nup88-202ENSMUST00000108530 Cldn13Q9Z0S4 211 aa13.15□□□□□ -0.3
Nup88-202ENSMUST00000108530 Trbc1A0A0A6YWV4 173 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 Tanc2A2A690 1994 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 Zfp988F6VKC7 633 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 Gm21411J3KMS0 136 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 Gm20939L7N243 523 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 Hprt1P00493 218 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 P01852 173 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 Lire1P11260 357 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 GalP47212 124 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 H3f3aP84244 136 aaKnown RBP13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 Zfp987Q32P14 633 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 Them4Q3UUI3 230 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 Q80UB0 333 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 TigarQ8BZA9 269 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 Klk13Q8CGR6 276 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 Olfr450Q8VF81 310 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 Olfr120Q8VFQ2 330 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 Olfr202Q8VGQ3 307 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 Mzt2Q9CQ25 159 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 Dazap2Q9DCP9 168 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 Acox3Q9EPL9 700 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 Arl6ip1Q9JKW0 203 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 Sectm1bQ9JL59 212 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 Gm5796E9Q7M8 205 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 Oosp3G5E8D7 195 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 Gm3629K7N6Y2 205 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 Gm10340K7N708 205 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 GastP48757 101 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 PkibQ04758 92 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 Fut4Q11127 433 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 Bcap29Q61334 240 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 Olfr851Q7TRG0 312 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 Olfr506Q7TRU6 314 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 HeltQ7TS99 240 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 Vangl1Q80Z96 526 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 Cdhr3Q8BL00 831 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 Spem2Q8C5U4 503 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 Olfr593Q8VF28 327 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 Olfr497Q8VG08 314 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 Olfr829Q8VGX1 321 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 Dnaja3Q99M87 480 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 Fdx2Q9CPW2 174 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 Rasal1Q9Z268 799 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 Gm12117V9GXK0 151 aa13.14□□□□□ -0.31
Nup88-202ENSMUST00000108530 Zfhx3Q61329 3726 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 Trav6-7-dv9A0A075B639 125 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 2610044O15Rik8A0A087WRJ1 410 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 Gm2022A0A1Y7VLT7 144 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 Znf551B2RUI1 696 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 Gm2075J3QMW5 144 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 Slc30a4O35149 430 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 Zfp13P10754 512 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 Cfl1P18760 166 aaKnown RBP13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 Wfdc18P62810 74 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 Rac1P63001 192 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 BB287469Q3UT53 144 aa13.13□□□□□ -0.31
Nup88-202ENSMUST00000108530 Fbxw20Q5U467 468 aa13.13□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 57 ms