RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 MAGOHP61326 146 aaKnown RBP13.2□□□□□ -0.3
DDX56-210ENST00000479440 HIST1H3AP68431 136 aa13.2□□□□□ -0.3
DDX56-210ENST00000479440 MZT1Q08AG7 82 aa13.2□□□□□ -0.3
DDX56-210ENST00000479440 ZBED5Q49AG3 693 aa13.2□□□□□ -0.3
DDX56-210ENST00000479440 HIST2H3PS2Q5TEC6 136 aa13.2□□□□□ -0.3
DDX56-210ENST00000479440 TEX36Q5VZQ5 186 aa13.2□□□□□ -0.3
DDX56-210ENST00000479440 ERICH5Q6P6B1 374 aa13.2□□□□□ -0.3
DDX56-210ENST00000479440 HIST2H3AQ71DI3 136 aa13.2□□□□□ -0.3
DDX56-210ENST00000479440 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.2□□□□□ -0.3
DDX56-210ENST00000479440 RNF113BQ8IZP6 322 aaKnown RBP13.2□□□□□ -0.3
DDX56-210ENST00000479440 DTX3Q8N9I9 347 aa13.2□□□□□ -0.3
DDX56-210ENST00000479440 TSPEARQ8WU66 669 aa13.2□□□□□ -0.3
DDX56-210ENST00000479440 LZICQ8WZA0 190 aa13.2□□□□□ -0.3
DDX56-210ENST00000479440 SLCO4A1Q96BD0 722 aa13.2□□□□□ -0.3
DDX56-210ENST00000479440 CLPTM1LQ96KA5 538 aa13.2□□□□□ -0.3
DDX56-210ENST00000479440 SH3GL1Q99961 368 aa13.2□□□□□ -0.3
DDX56-210ENST00000479440 FNDC11Q9BVV2 318 aa13.2□□□□□ -0.3
DDX56-210ENST00000479440 RAB18Q9NP72 206 aa13.2□□□□□ -0.3
DDX56-210ENST00000479440 LHFPL6Q9Y693 200 aa13.2□□□□□ -0.3
DDX56-210ENST00000479440 PLXNB1O43157 2135 aa13.19□□□□□ -0.3
DDX56-210ENST00000479440 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.19□□□□□ -0.3
DDX56-210ENST00000479440 LCATP04180 440 aa13.19□□□□□ -0.3
DDX56-210ENST00000479440 KIR2DS4P43632 304 aa13.19□□□□□ -0.3
DDX56-210ENST00000479440 GPR4P46093 362 aa13.19□□□□□ -0.3
DDX56-210ENST00000479440 ECH1Q13011 328 aa13.19□□□□□ -0.3
DDX56-210ENST00000479440 KRTAP27-1Q3LI81 207 aa13.19□□□□□ -0.3
DDX56-210ENST00000479440 GPR139Q6DWJ6 353 aa13.19□□□□□ -0.3
DDX56-210ENST00000479440 ZNF730Q6ZMV8 503 aa13.19□□□□□ -0.3
DDX56-210ENST00000479440 CALHM3Q86XJ0 350 aa13.19□□□□□ -0.3
DDX56-210ENST00000479440 GCSAMQ8N6F7 178 aa13.19□□□□□ -0.3
DDX56-210ENST00000479440 LY6G5BQ8NDX9 201 aa13.19□□□□□ -0.3
DDX56-210ENST00000479440 ACOT11Q8WXI4 607 aaPredicted RBP13.19□□□□□ -0.3
DDX56-210ENST00000479440 TPD52L3Q96J77 140 aa13.19□□□□□ -0.3
DDX56-210ENST00000479440 ATF6BQ99941 703 aa13.19□□□□□ -0.3
DDX56-210ENST00000479440 SIGLEC9Q9Y336 463 aa13.19□□□□□ -0.3
DDX56-210ENST00000479440 A0A1W2PRD5 423 aa13.18□□□□□ -0.3
DDX56-210ENST00000479440 A0A1W2PRF3 423 aa13.18□□□□□ -0.3
DDX56-210ENST00000479440 A0A1W2PRM7 423 aa13.18□□□□□ -0.3
DDX56-210ENST00000479440 MEIOCA2RUB1 952 aa13.18□□□□□ -0.3
DDX56-210ENST00000479440 F5H5K5 113 aa13.18□□□□□ -0.3
DDX56-210ENST00000479440 H3BUX3 64 aa13.18□□□□□ -0.3
DDX56-210ENST00000479440 CDC42EP2O14613 210 aa13.18□□□□□ -0.3
DDX56-210ENST00000479440 FCN3O75636 299 aa13.18□□□□□ -0.3
DDX56-210ENST00000479440 CRABP1P29762 137 aa13.18□□□□□ -0.3
DDX56-210ENST00000479440 CENPAP49450 140 aa13.18□□□□□ -0.3
DDX56-210ENST00000479440 ACSM1Q08AH1 577 aa13.18□□□□□ -0.3
DDX56-210ENST00000479440 CYLC2Q14093 348 aaPredicted RBP13.18□□□□□ -0.3
DDX56-210ENST00000479440 NSUN5P1Q3KNT7 163 aa13.18□□□□□ -0.3
DDX56-210ENST00000479440 CYBRD1Q53TN4 286 aa13.18□□□□□ -0.3
DDX56-210ENST00000479440 NCR3LG1Q68D85 454 aa13.18□□□□□ -0.3
DDX56-210ENST00000479440 CORO6Q6QEF8 472 aa13.18□□□□□ -0.3
DDX56-210ENST00000479440 SLC36A1Q7Z2H8 476 aa13.18□□□□□ -0.3
DDX56-210ENST00000479440 OR4F17Q8NGA8 305 aa13.18□□□□□ -0.3
DDX56-210ENST00000479440 OR8J3Q8NGG0 315 aa13.18□□□□□ -0.3
DDX56-210ENST00000479440 OR4F4Q96R69 305 aa13.18□□□□□ -0.3
DDX56-210ENST00000479440 GPX7Q96SL4 187 aaPredicted RBP13.18□□□□□ -0.3
DDX56-210ENST00000479440 PITX2Q99697 317 aa13.18□□□□□ -0.3
DDX56-210ENST00000479440 NUAK2Q9H093 628 aa13.18□□□□□ -0.3
DDX56-210ENST00000479440 FAM234AQ9H0X4 552 aa13.18□□□□□ -0.3
DDX56-210ENST00000479440 MRPL15Q9P015 296 aaKnown RBP13.18□□□□□ -0.3
DDX56-210ENST00000479440 RHCGQ9UBD6 479 aa13.18□□□□□ -0.3
DDX56-210ENST00000479440 TMEM5Q9Y2B1 443 aa13.18□□□□□ -0.3
DDX56-210ENST00000479440 CD300LBA8K4G0 201 aa13.17□□□□□ -0.3
DDX56-210ENST00000479440 FBXO24O75426 580 aa13.17□□□□□ -0.3
DDX56-210ENST00000479440 NDUFB2O95178 105 aa13.17□□□□□ -0.3
DDX56-210ENST00000479440 IFNW1P05000 195 aa13.17□□□□□ -0.3
DDX56-210ENST00000479440 GRPP07492 148 aa13.17□□□□□ -0.3
DDX56-210ENST00000479440 VSIG10L2P0DP72 767 aa13.17□□□□□ -0.3
DDX56-210ENST00000479440 GGT2P36268 569 aa13.17□□□□□ -0.3
DDX56-210ENST00000479440 TRAP1Q12931 704 aaKnown RBP13.17□□□□□ -0.3
DDX56-210ENST00000479440 KLRD1Q13241 179 aa13.17□□□□□ -0.3
DDX56-210ENST00000479440 MEP1BQ16820 701 aa13.17□□□□□ -0.3
DDX56-210ENST00000479440 MICBQ29980 383 aa13.17□□□□□ -0.3
DDX56-210ENST00000479440 RABL3Q5HYI8 236 aa13.17□□□□□ -0.3
DDX56-210ENST00000479440 NANOGP8Q6NSW7 305 aa13.17□□□□□ -0.3
DDX56-210ENST00000479440 MBOAT2Q6ZWT7 520 aa13.17□□□□□ -0.3
DDX56-210ENST00000479440 BEND2Q8NDZ0 799 aa13.17□□□□□ -0.3
DDX56-210ENST00000479440 STON2Q8WXE9 905 aa13.17□□□□□ -0.3
DDX56-210ENST00000479440 NRIP3Q9NQ35 241 aa13.17□□□□□ -0.3
DDX56-210ENST00000479440 C14orf119Q9NWQ9 140 aa13.17□□□□□ -0.3
DDX56-210ENST00000479440 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.17□□□□□ -0.3
DDX56-210ENST00000479440 MAB21L2Q9Y586 359 aa13.17□□□□□ -0.3
DDX56-210ENST00000479440 V9GYY5 206 aaPredicted RBP13.17□□□□□ -0.3
DDX56-210ENST00000479440 IGHV3OR15-7A0A075B7D8 119 aa13.16□□□□□ -0.3
DDX56-210ENST00000479440 A0A087WUU8 490 aa13.16□□□□□ -0.3
DDX56-210ENST00000479440 GGT3PA6NGU5 568 aa13.16□□□□□ -0.3
DDX56-210ENST00000479440 SOCS2O14508 198 aa13.16□□□□□ -0.3
DDX56-210ENST00000479440 NDUFB3O43676 98 aa13.16□□□□□ -0.3
DDX56-210ENST00000479440 VSIG8P0DPA2 414 aa13.16□□□□□ -0.3
DDX56-210ENST00000479440 MUC1P15941 1255 aaPredicted RBP13.16□□□□□ -0.3
DDX56-210ENST00000479440 ZNF26P17031 533 aaPredicted RBP13.16□□□□□ -0.3
DDX56-210ENST00000479440 GRK5P34947 590 aa13.16□□□□□ -0.3
DDX56-210ENST00000479440 MDH1P40925 334 aaKnown RBP13.16□□□□□ -0.3
DDX56-210ENST00000479440 YAP1P46937 504 aaKnown RBP13.16□□□□□ -0.3
DDX56-210ENST00000479440 RPS6KA3P51812 740 aa13.16□□□□□ -0.3
DDX56-210ENST00000479440 UBE2E1P51965 193 aa13.16□□□□□ -0.3
DDX56-210ENST00000479440 TPTEP56180 551 aa13.16□□□□□ -0.3
DDX56-210ENST00000479440 EMX1Q04741 257 aaPredicted RBP13.16□□□□□ -0.3
DDX56-210ENST00000479440 PCK2Q16822 640 aa13.16□□□□□ -0.3
DDX56-210ENST00000479440 WDR38Q5JTN6 314 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms