RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 EMC9Q9Y3B6 208 aa12.28□□□□□ -0.44
NPHP4-207ENST00000470763 SERINC4A6NH21 518 aa12.28□□□□□ -0.44
NPHP4-207ENST00000470763 UMAD1C9J7I0 102 aa12.28□□□□□ -0.44
NPHP4-207ENST00000470763 OR6A2O95222 327 aa12.28□□□□□ -0.44
NPHP4-207ENST00000470763 FHITP49789 147 aa12.28□□□□□ -0.44
NPHP4-207ENST00000470763 PDZD11Q5EBL8 140 aa12.28□□□□□ -0.44
NPHP4-207ENST00000470763 HOGA1Q86XE5 327 aa12.28□□□□□ -0.44
NPHP4-207ENST00000470763 OR13C9Q8NGT0 318 aa12.28□□□□□ -0.44
NPHP4-207ENST00000470763 GTF3AQ92664 365 aaKnown RBP12.28□□□□□ -0.44
NPHP4-207ENST00000470763 THRSPQ92748 146 aa12.28□□□□□ -0.44
NPHP4-207ENST00000470763 PMM1Q92871 262 aa12.28□□□□□ -0.44
NPHP4-207ENST00000470763 SRMSQ9H3Y6 488 aa12.28□□□□□ -0.44
NPHP4-207ENST00000470763 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.28□□□□□ -0.44
NPHP4-207ENST00000470763 PHPT1Q9NRX4 125 aaPredicted RBP12.28□□□□□ -0.44
NPHP4-207ENST00000470763 FLVCR1Q9Y5Y0 555 aa12.28□□□□□ -0.44
NPHP4-207ENST00000470763 SPACA6W5XKT8 324 aa12.28□□□□□ -0.44
NPHP4-207ENST00000470763 LOC101059948A0A1B0GTJ6 334 aa12.28□□□□□ -0.44
NPHP4-207ENST00000470763 H7C1Q1 480 aa12.28□□□□□ -0.44
NPHP4-207ENST00000470763 FGF19O95750 216 aa12.28□□□□□ -0.44
NPHP4-207ENST00000470763 ADH1AP07327 375 aa12.28□□□□□ -0.44
NPHP4-207ENST00000470763 PMELP40967 661 aa12.28□□□□□ -0.44
NPHP4-207ENST00000470763 ZNF124Q15973 351 aa12.28□□□□□ -0.44
NPHP4-207ENST00000470763 NSUN5P2Q63ZY6 315 aa12.28□□□□□ -0.44
NPHP4-207ENST00000470763 CBLN3Q6UW01 205 aa12.28□□□□□ -0.44
NPHP4-207ENST00000470763 UNQ6494/PRO21346Q6UXR6 183 aa12.28□□□□□ -0.44
NPHP4-207ENST00000470763 TMEM104Q8NE00 496 aa12.28□□□□□ -0.44
NPHP4-207ENST00000470763 ANKRD9Q96BM1 317 aaPredicted RBP12.28□□□□□ -0.44
NPHP4-207ENST00000470763 TM4SF19Q96DZ7 209 aa12.28□□□□□ -0.44
NPHP4-207ENST00000470763 LRP12Q9Y561 859 aa12.28□□□□□ -0.44
NPHP4-207ENST00000470763 MMP24Q9Y5R2 645 aa12.28□□□□□ -0.44
NPHP4-207ENST00000470763 ARHGEF17Q96PE2 2063 aaPredicted RBP12.27□□□□□ -0.44
NPHP4-207ENST00000470763 LOC107986453A0A1B0GWG9 222 aa12.27□□□□□ -0.44
NPHP4-207ENST00000470763 C2orf74A8MZ97 194 aa12.27□□□□□ -0.44
NPHP4-207ENST00000470763 ASAH2BP0C7U1 165 aa12.27□□□□□ -0.44
NPHP4-207ENST00000470763 S100A2P29034 98 aa12.27□□□□□ -0.44
NPHP4-207ENST00000470763 DRD3P35462 400 aa12.27□□□□□ -0.44
NPHP4-207ENST00000470763 GUK1Q16774 197 aa12.27□□□□□ -0.44
NPHP4-207ENST00000470763 ARRDC1Q8N5I2 433 aa12.27□□□□□ -0.44
NPHP4-207ENST00000470763 ST7LQ8TDW4 575 aa12.27□□□□□ -0.44
NPHP4-207ENST00000470763 WFIKKN2Q8TEU8 576 aa12.27□□□□□ -0.44
NPHP4-207ENST00000470763 TIMM29Q9BSF4 260 aa12.27□□□□□ -0.44
NPHP4-207ENST00000470763 NICN1Q9BSH3 213 aa12.27□□□□□ -0.44
NPHP4-207ENST00000470763 TBC1D29Q9UFV1 150 aa12.27□□□□□ -0.44
NPHP4-207ENST00000470763 A0A0A6YYH2 397 aa12.27□□□□□ -0.45
NPHP4-207ENST00000470763 A6NJ64 397 aa12.27□□□□□ -0.45
NPHP4-207ENST00000470763 APBB3O95704 486 aa12.27□□□□□ -0.45
NPHP4-207ENST00000470763 IFNA17P01571 189 aa12.27□□□□□ -0.45
NPHP4-207ENST00000470763 HKR1P10072 659 aa12.27□□□□□ -0.45
NPHP4-207ENST00000470763 ZNF10P21506 573 aaPredicted RBP12.27□□□□□ -0.45
NPHP4-207ENST00000470763 TAS2R31P59538 309 aa12.27□□□□□ -0.45
NPHP4-207ENST00000470763 ZP2Q05996 745 aa12.27□□□□□ -0.45
NPHP4-207ENST00000470763 PDGFRLQ15198 375 aa12.27□□□□□ -0.45
NPHP4-207ENST00000470763 ZNF141Q15928 474 aa12.27□□□□□ -0.45
NPHP4-207ENST00000470763 ZNF239Q16600 458 aaKnown RBP12.27□□□□□ -0.45
NPHP4-207ENST00000470763 TEX30Q5JUR7 227 aa12.27□□□□□ -0.45
NPHP4-207ENST00000470763 RD3Q7Z3Z2 195 aa12.27□□□□□ -0.45
NPHP4-207ENST00000470763 TERB2Q8NHR7 220 aa12.27□□□□□ -0.45
NPHP4-207ENST00000470763 ZDHHC12Q96GR4 267 aa12.27□□□□□ -0.45
NPHP4-207ENST00000470763 TUBA4BQ9H853 241 aa12.27□□□□□ -0.45
NPHP4-207ENST00000470763 FBXL17Q9UF56 701 aa12.27□□□□□ -0.45
NPHP4-207ENST00000470763 H0YGG7 62 aa12.26□□□□□ -0.45
NPHP4-207ENST00000470763 SLC16A7O60669 478 aa12.26□□□□□ -0.45
NPHP4-207ENST00000470763 SFT2D2O95562 160 aa12.26□□□□□ -0.45
NPHP4-207ENST00000470763 HOXC4P09017 264 aaPredicted RBP12.26□□□□□ -0.45
NPHP4-207ENST00000470763 OR13C7P0DN81 318 aa12.26□□□□□ -0.45
NPHP4-207ENST00000470763 NDUFB7P17568 137 aa12.26□□□□□ -0.45
NPHP4-207ENST00000470763 GDI1P31150 447 aa12.26□□□□□ -0.45
NPHP4-207ENST00000470763 RIDAP52758 137 aaKnown RBP12.26□□□□□ -0.45
NPHP4-207ENST00000470763 CLDN6P56747 220 aa12.26□□□□□ -0.45
NPHP4-207ENST00000470763 ARF3P61204 181 aaPredicted RBP12.26□□□□□ -0.45
NPHP4-207ENST00000470763 SUPT4H1P63272 117 aaKnown RBP12.26□□□□□ -0.45
NPHP4-207ENST00000470763 TMEM268Q5VZI3 342 aa12.26□□□□□ -0.45
NPHP4-207ENST00000470763 SLC18B1Q6NT16 456 aa12.26□□□□□ -0.45
NPHP4-207ENST00000470763 FDX2Q6P4F2 183 aa12.26□□□□□ -0.45
NPHP4-207ENST00000470763 RAB18Q9NP72 206 aa12.26□□□□□ -0.45
NPHP4-207ENST00000470763 MRPL22Q9NWU5 206 aaKnown RBP12.26□□□□□ -0.45
NPHP4-207ENST00000470763 FBXO7Q9Y3I1 522 aa12.26□□□□□ -0.45
NPHP4-207ENST00000470763 ZNF354AO60765 605 aaPredicted RBP12.26□□□□□ -0.45
NPHP4-207ENST00000470763 C1QL1O75973 258 aa12.26□□□□□ -0.45
NPHP4-207ENST00000470763 MPZL1O95297 269 aa12.26□□□□□ -0.45
NPHP4-207ENST00000470763 HOXA5P20719 270 aa12.26□□□□□ -0.45
NPHP4-207ENST00000470763 S1PR1P21453 382 aa12.26□□□□□ -0.45
NPHP4-207ENST00000470763 MPZP25189 248 aa12.26□□□□□ -0.45
NPHP4-207ENST00000470763 GNALP38405 381 aa12.26□□□□□ -0.45
NPHP4-207ENST00000470763 VIPR2P41587 438 aa12.26□□□□□ -0.45
NPHP4-207ENST00000470763 EIF5AP63241 154 aaKnown RBP12.26□□□□□ -0.45
NPHP4-207ENST00000470763 HMGN3Q15651 99 aa12.26□□□□□ -0.45
NPHP4-207ENST00000470763 CD226Q15762 336 aa12.26□□□□□ -0.45
NPHP4-207ENST00000470763 TAF8Q7Z7C8 310 aa12.26□□□□□ -0.45
NPHP4-207ENST00000470763 CATSPERDQ86XM0 798 aa12.26□□□□□ -0.45
NPHP4-207ENST00000470763 OR9K2Q8NGE7 335 aa12.26□□□□□ -0.45
NPHP4-207ENST00000470763 OR10D4PQ8NGN7 298 aa12.26□□□□□ -0.45
NPHP4-207ENST00000470763 ABHD6Q9BV23 337 aa12.26□□□□□ -0.45
NPHP4-207ENST00000470763 ZBP1Q9H171 429 aa12.26□□□□□ -0.45
NPHP4-207ENST00000470763 SLC26A1Q9H2B4 701 aa12.26□□□□□ -0.45
NPHP4-207ENST00000470763 XKRYO14609 159 aa12.26□□□□□ -0.45
NPHP4-207ENST00000470763 FOXS1O43638 330 aa12.26□□□□□ -0.45
NPHP4-207ENST00000470763 LYL1P12980 280 aa12.26□□□□□ -0.45
NPHP4-207ENST00000470763 SNCAP37840 140 aa12.26□□□□□ -0.45
NPHP4-207ENST00000470763 C1QL3Q5VWW1 255 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms