RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 YY2O15391 372 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 TIMM8AO60220 97 aaPredicted RBP7.1□□□□□ -1.27
VPS13D-211ENST00000543710 STATHP02808 62 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 GABRG2P18507 467 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 MAKP20794 623 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 EVX1P49640 407 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 PJVKQ0ZLH3 352 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 LSRQ86X29 649 aaPredicted RBP7.1□□□□□ -1.27
VPS13D-211ENST00000543710 NOXO1Q8NFA2 376 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 OR11G2Q8NGC1 345 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 GUCD1Q96NT3 240 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 DHRS9Q9BPW9 319 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 NXF5Q9H1B4 397 aaKnown RBP7.1□□□□□ -1.27
VPS13D-211ENST00000543710 UBQLN3Q9H347 655 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 UCK1Q9HA47 277 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 OBP2BQ9NPH6 170 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 OCIAD1Q9NX40 245 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 CACNG4Q9UBN1 327 aa7.1□□□□□ -1.27
VPS13D-211ENST00000543710 A0A0A6YYJ9 748 aa7.09□□□□□ -1.27
VPS13D-211ENST00000543710 IGHV1OR15-9A0A0B4J2B8 117 aa7.09□□□□□ -1.27
VPS13D-211ENST00000543710 DUXBA0A1W2PPF3 345 aa7.09□□□□□ -1.27
VPS13D-211ENST00000543710 TOX3O15405 576 aaPredicted RBP7.09□□□□□ -1.27
VPS13D-211ENST00000543710 TOXO94900 526 aa7.09□□□□□ -1.27
VPS13D-211ENST00000543710 NPPBP16860 134 aa7.09□□□□□ -1.27
VPS13D-211ENST00000543710 RBP2P50120 134 aa7.09□□□□□ -1.27
VPS13D-211ENST00000543710 FABP6P51161 128 aa7.09□□□□□ -1.27
VPS13D-211ENST00000543710 H3F3CQ6NXT2 135 aa7.09□□□□□ -1.27
VPS13D-211ENST00000543710 SLC23A3Q6PIS1 610 aa7.09□□□□□ -1.27
VPS13D-211ENST00000543710 PKMYT1Q99640 499 aa7.09□□□□□ -1.27
VPS13D-211ENST00000543710 ZNF426Q9BUY5 554 aa7.09□□□□□ -1.27
VPS13D-211ENST00000543710 OR51I2Q9H344 312 aa7.09□□□□□ -1.27
VPS13D-211ENST00000543710 HRASLSQ9HDD0 168 aa7.09□□□□□ -1.27
VPS13D-211ENST00000543710 FKBP11Q9NYL4 201 aa7.09□□□□□ -1.27
VPS13D-211ENST00000543710 F5H5K5 113 aa7.09□□□□□ -1.27
VPS13D-211ENST00000543710 GUSBP08236 651 aa7.09□□□□□ -1.27
VPS13D-211ENST00000543710 NXPH1P58417 271 aa7.09□□□□□ -1.27
VPS13D-211ENST00000543710 PPP1R8Q12972 351 aaKnown RBP7.09□□□□□ -1.27
VPS13D-211ENST00000543710 FCRLBQ6BAA4 426 aa7.09□□□□□ -1.27
VPS13D-211ENST00000543710 TMEM255BQ8WV15 326 aa7.09□□□□□ -1.27
VPS13D-211ENST00000543710 PELI1Q96FA3 418 aa7.09□□□□□ -1.27
VPS13D-211ENST00000543710 TEAD3Q99594 435 aa7.09□□□□□ -1.27
VPS13D-211ENST00000543710 ATXN7L1Q9ULK2 861 aaPredicted RBP7.09□□□□□ -1.27
VPS13D-211ENST00000543710 DEGS1O15121 323 aa7.09□□□□□ -1.27
VPS13D-211ENST00000543710 QDPRP09417 244 aa7.09□□□□□ -1.27
VPS13D-211ENST00000543710 CPN1P15169 458 aa7.09□□□□□ -1.27
VPS13D-211ENST00000543710 ZFP36L2P47974 494 aaKnown RBP7.09□□□□□ -1.27
VPS13D-211ENST00000543710 TPPP2P59282 170 aa7.09□□□□□ -1.27
VPS13D-211ENST00000543710 FAM53BQ14153 422 aa7.09□□□□□ -1.27
VPS13D-211ENST00000543710 FCN2Q15485 313 aa7.09□□□□□ -1.27
VPS13D-211ENST00000543710 ISXQ2M1V0 245 aa7.09□□□□□ -1.27
VPS13D-211ENST00000543710 DEFB110Q30KQ9 67 aa7.09□□□□□ -1.27
VPS13D-211ENST00000543710 FAM74A3Q4VXF1 159 aa7.09□□□□□ -1.27
VPS13D-211ENST00000543710 NHLRC1Q6VVB1 395 aa7.09□□□□□ -1.27
VPS13D-211ENST00000543710 SH2D5Q6ZV89 423 aa7.09□□□□□ -1.27
VPS13D-211ENST00000543710 FAM217AQ8IXS0 508 aa7.09□□□□□ -1.27
VPS13D-211ENST00000543710 LNX2Q8N448 690 aa7.09□□□□□ -1.27
VPS13D-211ENST00000543710 ZNF441Q8N8Z8 693 aa7.09□□□□□ -1.27
VPS13D-211ENST00000543710 SMIM4Q8WVI0 70 aa7.09□□□□□ -1.27
VPS13D-211ENST00000543710 PP6455Q8WZ26 134 aa7.09□□□□□ -1.27
VPS13D-211ENST00000543710 TNFRSF13CQ96RJ3 184 aa7.09□□□□□ -1.27
VPS13D-211ENST00000543710 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.09□□□□□ -1.27
VPS13D-211ENST00000543710 PRR19A6NJB7 356 aa7.09□□□□□ -1.28
VPS13D-211ENST00000543710 SNRPBP14678 240 aaKnown RBP7.09□□□□□ -1.28
VPS13D-211ENST00000543710 CDK5R1Q15078 307 aa7.09□□□□□ -1.28
VPS13D-211ENST00000543710 FAM111BQ6SJ93 734 aa7.09□□□□□ -1.28
VPS13D-211ENST00000543710 GLIPR1L1Q6UWM5 242 aa7.09□□□□□ -1.28
VPS13D-211ENST00000543710 H2BFWTQ7Z2G1 175 aa7.09□□□□□ -1.28
VPS13D-211ENST00000543710 CPEB2Q7Z5Q1 589 aaKnown RBP7.09□□□□□ -1.28
VPS13D-211ENST00000543710 OR4D9Q8NGE8 314 aa7.09□□□□□ -1.28
VPS13D-211ENST00000543710 HMGCLL1Q8TB92 370 aa7.09□□□□□ -1.28
VPS13D-211ENST00000543710 TMEM190Q8WZ59 177 aa7.09□□□□□ -1.28
VPS13D-211ENST00000543710 PIGCQ92535 297 aa7.09□□□□□ -1.28
VPS13D-211ENST00000543710 KISS1RQ969F8 398 aaPredicted RBP7.09□□□□□ -1.28
VPS13D-211ENST00000543710 SLCO4A1Q96BD0 722 aa7.09□□□□□ -1.28
VPS13D-211ENST00000543710 SPSB1Q96BD6 273 aa7.09□□□□□ -1.28
VPS13D-211ENST00000543710 PIMREGQ9BSJ6 248 aa7.09□□□□□ -1.28
VPS13D-211ENST00000543710 HRH4Q9H3N8 390 aa7.09□□□□□ -1.28
VPS13D-211ENST00000543710 SMDT1Q9H4I9 107 aa7.09□□□□□ -1.28
VPS13D-211ENST00000543710 ZNF331Q9NQX6 463 aaPredicted RBP7.09□□□□□ -1.28
VPS13D-211ENST00000543710 GLRX2Q9NS18 164 aa7.09□□□□□ -1.28
VPS13D-211ENST00000543710 USP36Q9P275 1121 aaKnown RBP7.09□□□□□ -1.28
VPS13D-211ENST00000543710 FAM166BA8MTA8 275 aa7.08□□□□□ -1.28
VPS13D-211ENST00000543710 ERVH48-1M5A8F1 160 aa7.08□□□□□ -1.28
VPS13D-211ENST00000543710 CTSLP07711 333 aa7.08□□□□□ -1.28
VPS13D-211ENST00000543710 NME1P15531 152 aaKnown RBP7.08□□□□□ -1.28
VPS13D-211ENST00000543710 MMP11P24347 488 aa7.08□□□□□ -1.28
VPS13D-211ENST00000543710 NKX2-1P43699 371 aaPredicted RBP7.08□□□□□ -1.28
VPS13D-211ENST00000543710 RPS10P46783 165 aaKnown RBP7.08□□□□□ -1.28
VPS13D-211ENST00000543710 SRP9P49458 86 aaKnown RBP7.08□□□□□ -1.28
VPS13D-211ENST00000543710 ZXDBP98169 803 aa7.08□□□□□ -1.28
VPS13D-211ENST00000543710 HSF1Q00613 529 aa7.08□□□□□ -1.28
VPS13D-211ENST00000543710 AKR1C1Q04828 323 aa7.08□□□□□ -1.28
VPS13D-211ENST00000543710 IL13RA2Q14627 380 aa7.08□□□□□ -1.28
VPS13D-211ENST00000543710 EXOSC7Q15024 291 aaKnown RBP7.08□□□□□ -1.28
VPS13D-211ENST00000543710 PYCR3Q53H96 274 aa7.08□□□□□ -1.28
VPS13D-211ENST00000543710 OR7E24Q6IFN5 339 aa7.08□□□□□ -1.28
VPS13D-211ENST00000543710 FRZBQ92765 325 aa7.08□□□□□ -1.28
VPS13D-211ENST00000543710 DDOQ99489 341 aa7.08□□□□□ -1.28
VPS13D-211ENST00000543710 NDFIP1Q9BT67 221 aa7.08□□□□□ -1.28
VPS13D-211ENST00000543710 GSX2Q9BZM3 304 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms