RNA–Protein interactions for RNA: ENST00000486720.1

APH1A-208, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 2

Gene APH1A, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-208ENST00000486720 ZNF85Q03923 595 aa12.6□□□□□ -0.39
APH1A-208ENST00000486720 RFLNBQ8N5W9 214 aa12.6□□□□□ -0.39
APH1A-208ENST00000486720 YIPF7Q8N8F6 280 aa12.6□□□□□ -0.39
APH1A-208ENST00000486720 KLF14Q8TD94 323 aaPredicted RBP12.6□□□□□ -0.39
APH1A-208ENST00000486720 TMEM80Q96HE8 168 aa12.6□□□□□ -0.39
APH1A-208ENST00000486720 CNBD2Q96M20 576 aa12.6□□□□□ -0.39
APH1A-208ENST00000486720 MRPL37Q9BZE1 423 aaKnown RBP12.6□□□□□ -0.39
APH1A-208ENST00000486720 OR10A2Q9H208 303 aa12.6□□□□□ -0.39
APH1A-208ENST00000486720 CXorf56Q9H5V9 222 aa12.6□□□□□ -0.39
APH1A-208ENST00000486720 OPA3Q9H6K4 179 aa12.6□□□□□ -0.39
APH1A-208ENST00000486720 MOB1AQ9H8S9 216 aa12.6□□□□□ -0.39
APH1A-208ENST00000486720 DUSP13Q9UII6 198 aa12.6□□□□□ -0.39
APH1A-208ENST00000486720 MYRFQ9Y2G1 1151 aa12.6□□□□□ -0.39
APH1A-208ENST00000486720 PMF1-BGLAPU3KQ54 211 aa12.6□□□□□ -0.39
APH1A-208ENST00000486720 HECTD1Q9ULT8 2610 aa12.6□□□□□ -0.39
APH1A-208ENST00000486720 IGLV3-9A0A075B6K5 115 aa12.59□□□□□ -0.39
APH1A-208ENST00000486720 TMEM269A0A1B0GVZ9 245 aa12.59□□□□□ -0.39
APH1A-208ENST00000486720 PRR32B1ATL7 298 aa12.59□□□□□ -0.39
APH1A-208ENST00000486720 DENRO43583 198 aaKnown RBP12.59□□□□□ -0.39
APH1A-208ENST00000486720 ATE1O95260 518 aa12.59□□□□□ -0.39
APH1A-208ENST00000486720 CCDC159P0C7I6 412 aa12.59□□□□□ -0.39
APH1A-208ENST00000486720 RAC2P15153 192 aa12.59□□□□□ -0.39
APH1A-208ENST00000486720 MYL12AP19105 171 aa12.59□□□□□ -0.39
APH1A-208ENST00000486720 CFL1P23528 166 aaKnown RBP12.59□□□□□ -0.39
APH1A-208ENST00000486720 MMP16P51512 607 aa12.59□□□□□ -0.39
APH1A-208ENST00000486720 GALEQ14376 348 aa12.59□□□□□ -0.39
APH1A-208ENST00000486720 SWI5Q1ZZU3 235 aa12.59□□□□□ -0.39
APH1A-208ENST00000486720 CDONQ4KMG0 1287 aa12.59□□□□□ -0.39
APH1A-208ENST00000486720 SPATA46Q5T0L3 261 aa12.59□□□□□ -0.39
APH1A-208ENST00000486720 ZNF684Q5T5D7 378 aa12.59□□□□□ -0.39
APH1A-208ENST00000486720 LAIR2Q6ISS4 152 aa12.59□□□□□ -0.39
APH1A-208ENST00000486720 FBXW12Q6X9E4 464 aa12.59□□□□□ -0.39
APH1A-208ENST00000486720 FAM57BQ71RH2 274 aa12.59□□□□□ -0.39
APH1A-208ENST00000486720 SSX6Q7RTT6 188 aa12.59□□□□□ -0.39
APH1A-208ENST00000486720 CDH24Q86UP0 819 aa12.59□□□□□ -0.39
APH1A-208ENST00000486720 NAA40Q86UY6 237 aa12.59□□□□□ -0.39
APH1A-208ENST00000486720 NRGNQ92686 78 aa12.59□□□□□ -0.39
APH1A-208ENST00000486720 GGHQ92820 318 aa12.59□□□□□ -0.39
APH1A-208ENST00000486720 PGAM5Q96HS1 289 aa12.59□□□□□ -0.39
APH1A-208ENST00000486720 SYT3Q9BQG1 590 aa12.59□□□□□ -0.39
APH1A-208ENST00000486720 ALG8Q9BVK2 526 aa12.59□□□□□ -0.39
APH1A-208ENST00000486720 RGCCQ9H4X1 137 aa12.59□□□□□ -0.39
APH1A-208ENST00000486720 CHCHD3Q9NX63 227 aaKnown RBP12.59□□□□□ -0.39
APH1A-208ENST00000486720 ERVK13-1Q9NX77 482 aa12.59□□□□□ -0.39
APH1A-208ENST00000486720 PTTG3PQ9NZH4 202 aa12.59□□□□□ -0.39
APH1A-208ENST00000486720 CGGBP1Q9UFW8 167 aaPredicted RBP12.59□□□□□ -0.39
APH1A-208ENST00000486720 MRM2Q9UI43 246 aaKnown RBP12.59□□□□□ -0.39
APH1A-208ENST00000486720 PSORS1C1Q9UIG5 152 aa12.59□□□□□ -0.39
APH1A-208ENST00000486720 DIMT1Q9UNQ2 313 aaKnown RBP12.59□□□□□ -0.39
APH1A-208ENST00000486720 EXOSC1Q9Y3B2 195 aaKnown RBP12.59□□□□□ -0.39
APH1A-208ENST00000486720 TPRKBQ9Y3C4 175 aa12.59□□□□□ -0.39
APH1A-208ENST00000486720 N6AMT1Q9Y5N5 214 aa12.59□□□□□ -0.39
APH1A-208ENST00000486720 HEATR1Q9H583 2144 aaKnown RBP12.59□□□□□ -0.39
APH1A-208ENST00000486720 RAI1Q7Z5J4 1906 aaPredicted RBP12.58□□□□□ -0.39
APH1A-208ENST00000486720 A0A1W2PPW3 197 aa12.58□□□□□ -0.4
APH1A-208ENST00000486720 SLC1A7O00341 560 aa12.58□□□□□ -0.4
APH1A-208ENST00000486720 TBX1O43435 398 aa12.58□□□□□ -0.4
APH1A-208ENST00000486720 XPNPEP2O43895 674 aa12.58□□□□□ -0.4
APH1A-208ENST00000486720 IGHV3-13P01766 116 aa12.58□□□□□ -0.4
APH1A-208ENST00000486720 MT-ND5P03915 603 aa12.58□□□□□ -0.4
APH1A-208ENST00000486720 SLC2A1P11166 492 aa12.58□□□□□ -0.4
APH1A-208ENST00000486720 SELEP16581 610 aa12.58□□□□□ -0.4
APH1A-208ENST00000486720 CD53P19397 219 aa12.58□□□□□ -0.4
APH1A-208ENST00000486720 MRPL28Q13084 256 aaKnown RBP12.58□□□□□ -0.4
APH1A-208ENST00000486720 TIGD6Q17RP2 521 aa12.58□□□□□ -0.4
APH1A-208ENST00000486720 MSMPQ1L6U9 139 aa12.58□□□□□ -0.4
APH1A-208ENST00000486720 MST1LQ2TV78 715 aa12.58□□□□□ -0.4
APH1A-208ENST00000486720 SNAI3Q3KNW1 292 aa12.58□□□□□ -0.4
APH1A-208ENST00000486720 C11orf71Q6IPW1 123 aa12.58□□□□□ -0.4
APH1A-208ENST00000486720 PRSS45Q7RTY3 260 aa12.58□□□□□ -0.4
APH1A-208ENST00000486720 MRPL21Q7Z2W9 205 aaKnown RBP12.58□□□□□ -0.4
APH1A-208ENST00000486720 LHFPL3Q86UP9 236 aa12.58□□□□□ -0.4
APH1A-208ENST00000486720 SYS1Q8N2H4 156 aa12.58□□□□□ -0.4
APH1A-208ENST00000486720 STX19Q8N4C7 294 aa12.58□□□□□ -0.4
APH1A-208ENST00000486720 ZNF540Q8NDQ6 660 aa12.58□□□□□ -0.4
APH1A-208ENST00000486720 HAVCR2Q8TDQ0 301 aa12.58□□□□□ -0.4
APH1A-208ENST00000486720 IGFBPL1Q8WX77 278 aa12.58□□□□□ -0.4
APH1A-208ENST00000486720 LIME1Q9H400 295 aa12.58□□□□□ -0.4
APH1A-208ENST00000486720 DYNLRB1Q9NP97 96 aa12.58□□□□□ -0.4
APH1A-208ENST00000486720 BRD7Q9NPI1 651 aa12.58□□□□□ -0.4
APH1A-208ENST00000486720 CYSLTR2Q9NS75 346 aa12.58□□□□□ -0.4
APH1A-208ENST00000486720 FAM206AQ9NX38 181 aa12.58□□□□□ -0.4
APH1A-208ENST00000486720 ZNF391Q9UJN7 358 aa12.58□□□□□ -0.4
APH1A-208ENST00000486720 GNG8Q9UK08 70 aa12.58□□□□□ -0.4
APH1A-208ENST00000486720 BLOC1S6Q9UL45 172 aa12.58□□□□□ -0.4
APH1A-208ENST00000486720 PLEKHA6Q9Y2H5 1048 aa12.58□□□□□ -0.4
APH1A-208ENST00000486720 SNX5Q9Y5X3 404 aa12.58□□□□□ -0.4
APH1A-208ENST00000486720 R4GMQ9 66 aa12.58□□□□□ -0.4
APH1A-208ENST00000486720 CADP27708 2225 aa12.58□□□□□ -0.4
APH1A-208ENST00000486720 ABCA4P78363 2273 aa12.57□□□□□ -0.4
APH1A-208ENST00000486720 TMEM129A0AVI4 362 aa12.57□□□□□ -0.4
APH1A-208ENST00000486720 LOC110117498-PIK3R3F6TDL0 507 aa12.57□□□□□ -0.4
APH1A-208ENST00000486720 M0R233 179 aa12.57□□□□□ -0.4
APH1A-208ENST00000486720 MAGEB4O15481 346 aaPredicted RBP12.57□□□□□ -0.4
APH1A-208ENST00000486720 CD8AP01732 235 aa12.57□□□□□ -0.4
APH1A-208ENST00000486720 KITLGP21583 273 aa12.57□□□□□ -0.4
APH1A-208ENST00000486720 LIPAP38571 399 aa12.57□□□□□ -0.4
APH1A-208ENST00000486720 MPV17P39210 176 aa12.57□□□□□ -0.4
APH1A-208ENST00000486720 PPOXP50336 477 aa12.57□□□□□ -0.4
APH1A-208ENST00000486720 ST3GAL4Q11206 333 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms