RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 VDAC3Q9Y277 283 aa11.11□□□□□ -0.63
ECHDC1-209ENST00000454591 ASXL3Q9C0F0 2248 aa11.11□□□□□ -0.63
ECHDC1-209ENST00000454591 CACNA1CQ13936 2221 aa11.11□□□□□ -0.63
ECHDC1-209ENST00000454591 A0A1W2PQM1 296 aa11.1□□□□□ -0.63
ECHDC1-209ENST00000454591 TMEM235A6NFC5 223 aa11.1□□□□□ -0.63
ECHDC1-209ENST00000454591 AQP7P3A6NL99 342 aa11.1□□□□□ -0.63
ECHDC1-209ENST00000454591 M0QYG6 137 aa11.1□□□□□ -0.63
ECHDC1-209ENST00000454591 ARPC5O15511 151 aa11.1□□□□□ -0.63
ECHDC1-209ENST00000454591 OR2F2O95006 317 aa11.1□□□□□ -0.63
ECHDC1-209ENST00000454591 TIAF1O95411 115 aa11.1□□□□□ -0.63
ECHDC1-209ENST00000454591 UBBP0CG47 229 aa11.1□□□□□ -0.63
ECHDC1-209ENST00000454591 IGFBP4P22692 258 aa11.1□□□□□ -0.63
ECHDC1-209ENST00000454591 HOXA6P31267 233 aa11.1□□□□□ -0.63
ECHDC1-209ENST00000454591 ALDH3B1P43353 468 aa11.1□□□□□ -0.63
ECHDC1-209ENST00000454591 RPS27AP62979 156 aaKnown RBP11.1□□□□□ -0.63
ECHDC1-209ENST00000454591 UBA52P62987 128 aaKnown RBP11.1□□□□□ -0.63
ECHDC1-209ENST00000454591 FOXK1P85037 733 aa11.1□□□□□ -0.63
ECHDC1-209ENST00000454591 OR2F1Q13607 317 aa11.1□□□□□ -0.63
ECHDC1-209ENST00000454591 NSUN5P2Q63ZY6 315 aa11.1□□□□□ -0.63
ECHDC1-209ENST00000454591 ZNF660Q6AZW8 331 aaPredicted RBP11.1□□□□□ -0.63
ECHDC1-209ENST00000454591 CORO6Q6QEF8 472 aa11.1□□□□□ -0.63
ECHDC1-209ENST00000454591 SHISA6Q6ZSJ9 500 aa11.1□□□□□ -0.63
ECHDC1-209ENST00000454591 LYG2Q86SG7 212 aa11.1□□□□□ -0.63
ECHDC1-209ENST00000454591 FJX1Q86VR8 437 aa11.1□□□□□ -0.63
ECHDC1-209ENST00000454591 OR5AS1Q8N127 324 aa11.1□□□□□ -0.63
ECHDC1-209ENST00000454591 KCNRGQ8N5I3 272 aa11.1□□□□□ -0.63
ECHDC1-209ENST00000454591 OR52N4Q8NGI2 321 aa11.1□□□□□ -0.63
ECHDC1-209ENST00000454591 OR10R2Q8NGX6 335 aa11.1□□□□□ -0.63
ECHDC1-209ENST00000454591 OR8S1Q8NH09 359 aa11.1□□□□□ -0.63
ECHDC1-209ENST00000454591 ELP5Q8TE02 316 aa11.1□□□□□ -0.63
ECHDC1-209ENST00000454591 MITD1Q8WV92 249 aa11.1□□□□□ -0.63
ECHDC1-209ENST00000454591 ZBTB8AQ96BR9 441 aa11.1□□□□□ -0.63
ECHDC1-209ENST00000454591 SPACA9Q96E40 222 aaPredicted RBP11.1□□□□□ -0.63
ECHDC1-209ENST00000454591 C1orf147Q96MC9 270 aaPredicted RBP11.1□□□□□ -0.63
ECHDC1-209ENST00000454591 OR6C1Q96RD1 312 aa11.1□□□□□ -0.63
ECHDC1-209ENST00000454591 PNRC2Q9NPJ4 139 aaKnown RBP11.1□□□□□ -0.63
ECHDC1-209ENST00000454591 RDH8Q9NYR8 311 aa11.1□□□□□ -0.63
ECHDC1-209ENST00000454591 NXT1Q9UKK6 140 aaKnown RBP11.1□□□□□ -0.63
ECHDC1-209ENST00000454591 VSIG4Q9Y279 399 aa11.1□□□□□ -0.63
ECHDC1-209ENST00000454591 KCNMB2Q9Y691 235 aa11.1□□□□□ -0.63
ECHDC1-209ENST00000454591 GON4LQ3T8J9 2241 aa11.1□□□□□ -0.63
ECHDC1-209ENST00000454591 RALGAPA1Q6GYQ0 2036 aa11.1□□□□□ -0.63
ECHDC1-209ENST00000454591 FXYD6-FXYD2A0A087WZ82 144 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 CCDC163A0A0D9SF12 145 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 IGHV5-10-1A0A0J9YXX1 117 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 C2orf72A6NCS6 295 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 ZSCAN5BA6NJL1 495 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 KRBOX1C9JBD0 128 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 MEN1O00255 615 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 EIF1AYO14602 144 aaKnown RBP11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 BET1O15155 118 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 FGF2P09038 288 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 FGF5P12034 268 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 CASRP41180 1078 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 EIF1AXP47813 144 aaKnown RBP11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 CXCL12P48061 93 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 CLRN1P58418 232 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 LSM6P62312 80 aaKnown RBP11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 GRB2P62993 217 aaKnown RBP11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 PNLIPRP3Q17RR3 467 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 CDNFQ49AH0 187 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 ACTBL2Q562R1 376 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 CFAP77Q6ZQR2 320 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 TRAPPC6BQ86SZ2 158 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 STEAP2Q8NFT2 490 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 OR2AJ1Q8NGZ0 328 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 MRGPRFQ96AM1 343 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 PHYHIPLQ96FC7 376 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 MFFQ9GZY8 342 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 FXYD6Q9H0Q3 95 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 DNTTIP1Q9H147 329 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 SLC25A32Q9H2D1 315 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 METTL7AQ9H8H3 244 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 SDHAF2Q9NX18 166 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 GHRLQ9UBU3 117 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 GPN3Q9UHW5 284 aaPredicted RBP11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 TNFSF18Q9UNG2 199 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 A0A0B4J2A0 478 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 H3BML4 177 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 MYF5P13349 255 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 PRF1P14222 555 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 ZNF28P17035 718 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 CD34P28906 385 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 TAS2R31P59538 309 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 HIST1H3AP68431 136 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 SLC35A1P78382 337 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 CCL7P80098 99 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 SORDQ00796 357 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 VAX1Q5SQQ9 334 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 C10orf128Q5T292 105 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 SFRP5Q5T4F7 317 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 HIST2H3PS2Q5TEC6 136 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 OR10K2Q6IF99 312 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 C11orf88Q6PI97 169 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 HIST2H3AQ71DI3 136 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 DOK3Q7L591 496 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 NAA40Q86UY6 237 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 GTPBP8Q8N3Z3 284 aaPredicted RBP11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 ACBD4Q8NC06 268 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 OR10G3Q8NGC4 313 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms