RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 TAS2R60P59551 318 aa14.6□□□□□ -0.07
NPHP3-201ENST00000337331 UBE2NP61088 152 aaKnown RBP14.6□□□□□ -0.07
NPHP3-201ENST00000337331 CDK5Q00535 292 aa14.6□□□□□ -0.07
NPHP3-201ENST00000337331 SURF2Q15527 256 aaPredicted RBP14.6□□□□□ -0.07
NPHP3-201ENST00000337331 OR8G1Q15617 311 aa14.6□□□□□ -0.07
NPHP3-201ENST00000337331 GLYATL3Q5SZD4 288 aa14.6□□□□□ -0.07
NPHP3-201ENST00000337331 MAMSTRQ6ZN01 415 aa14.6□□□□□ -0.07
NPHP3-201ENST00000337331 PLPP7Q8NBV4 271 aa14.6□□□□□ -0.07
NPHP3-201ENST00000337331 PHYHIPQ92561 330 aa14.6□□□□□ -0.07
NPHP3-201ENST00000337331 OR5B12Q96R08 314 aa14.6□□□□□ -0.07
NPHP3-201ENST00000337331 EPHA1P21709 976 aa14.59□□□□□ -0.07
NPHP3-201ENST00000337331 H2BFSP57053 126 aa14.59□□□□□ -0.07
NPHP3-201ENST00000337331 GGNBP1Q5YKI7 109 aa14.59□□□□□ -0.07
NPHP3-201ENST00000337331 KIAA0895LQ68EN5 471 aa14.59□□□□□ -0.07
NPHP3-201ENST00000337331 GABRG1Q8N1C3 465 aa14.59□□□□□ -0.07
NPHP3-201ENST00000337331 UBL7Q96S82 380 aaPredicted RBP14.59□□□□□ -0.07
NPHP3-201ENST00000337331 ATG101Q9BSB4 218 aa14.59□□□□□ -0.07
NPHP3-201ENST00000337331 OR11A1Q9GZK7 315 aa14.59□□□□□ -0.07
NPHP3-201ENST00000337331 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.59□□□□□ -0.07
NPHP3-201ENST00000337331 TMED7-TICAM2A0A0A6YYA0 188 aa14.59□□□□□ -0.07
NPHP3-201ENST00000337331 FTCDNL1E5RQL4 147 aa14.59□□□□□ -0.07
NPHP3-201ENST00000337331 TNFSF12O43508 249 aa14.59□□□□□ -0.07
NPHP3-201ENST00000337331 CD79AP11912 226 aa14.59□□□□□ -0.07
NPHP3-201ENST00000337331 CTHP32929 405 aa14.59□□□□□ -0.07
NPHP3-201ENST00000337331 CX3CR1P49238 355 aa14.59□□□□□ -0.07
NPHP3-201ENST00000337331 GSK3AP49840 483 aa14.59□□□□□ -0.07
NPHP3-201ENST00000337331 PRAMEF20Q5VT98 475 aa14.59□□□□□ -0.07
NPHP3-201ENST00000337331 Q6ZNB5 142 aa14.59□□□□□ -0.07
NPHP3-201ENST00000337331 SEMA6DQ8NFY4 1073 aa14.59□□□□□ -0.07
NPHP3-201ENST00000337331 GPR32P1Q8NGA4 272 aa14.59□□□□□ -0.07
NPHP3-201ENST00000337331 GDF2Q9UK05 429 aaPredicted RBP14.59□□□□□ -0.07
NPHP3-201ENST00000337331 TMED7Q9Y3B3 224 aa14.59□□□□□ -0.07
NPHP3-201ENST00000337331 SF3B6Q9Y3B4 125 aaKnown RBP14.59□□□□□ -0.07
NPHP3-201ENST00000337331 PCYT1BQ9Y5K3 369 aaPredicted RBP14.59□□□□□ -0.07
NPHP3-201ENST00000337331 FGF17O60258 216 aa14.59□□□□□ -0.07
NPHP3-201ENST00000337331 BDH1Q02338 343 aa14.59□□□□□ -0.07
NPHP3-201ENST00000337331 SLC22A25Q6T423 547 aa14.59□□□□□ -0.07
NPHP3-201ENST00000337331 SLC46A1Q96NT5 459 aa14.59□□□□□ -0.07
NPHP3-201ENST00000337331 NRIP2Q9BQI9 281 aa14.59□□□□□ -0.07
NPHP3-201ENST00000337331 TMEM59Q9BXS4 323 aa14.59□□□□□ -0.07
NPHP3-201ENST00000337331 SEMA6CQ9H3T2 930 aa14.59□□□□□ -0.07
NPHP3-201ENST00000337331 CMC2Q9NRP2 79 aa14.59□□□□□ -0.07
NPHP3-201ENST00000337331 KCNIP1Q9NZI2 227 aa14.59□□□□□ -0.07
NPHP3-201ENST00000337331 LOXHD1Q8IVV2 1947 aa14.59□□□□□ -0.07
NPHP3-201ENST00000337331 TRAV36DV7A0A075B6V5 113 aa14.59□□□□□ -0.07
NPHP3-201ENST00000337331 DFFBO76075 338 aa14.59□□□□□ -0.07
NPHP3-201ENST00000337331 GLCEO94923 617 aa14.59□□□□□ -0.07
NPHP3-201ENST00000337331 IFNA1P01562 189 aa14.59□□□□□ -0.07
NPHP3-201ENST00000337331 PLPP5Q8NEB5 264 aa14.59□□□□□ -0.07
NPHP3-201ENST00000337331 RGP1Q92546 391 aaPredicted RBP14.59□□□□□ -0.07
NPHP3-201ENST00000337331 HAS2Q92819 552 aa14.59□□□□□ -0.07
NPHP3-201ENST00000337331 FAM3DQ96BQ1 224 aa14.59□□□□□ -0.07
NPHP3-201ENST00000337331 BCL2L10Q9HD36 194 aa14.59□□□□□ -0.07
NPHP3-201ENST00000337331 GOLT1BQ9Y3E0 138 aa14.59□□□□□ -0.07
NPHP3-201ENST00000337331 GPX4P36969 197 aaPredicted RBP14.58□□□□□ -0.07
NPHP3-201ENST00000337331 CCR2P41597 374 aa14.58□□□□□ -0.07
NPHP3-201ENST00000337331 PPP1R3BQ86XI6 285 aa14.58□□□□□ -0.07
NPHP3-201ENST00000337331 ARL6IP6Q8N6S5 226 aa14.58□□□□□ -0.07
NPHP3-201ENST00000337331 OR4K15Q8NH41 348 aa14.58□□□□□ -0.07
NPHP3-201ENST00000337331 CNRIP1Q96F85 164 aaPredicted RBP14.58□□□□□ -0.07
NPHP3-201ENST00000337331 HHIPL1Q96JK4 782 aa14.58□□□□□ -0.07
NPHP3-201ENST00000337331 PBX4Q9BYU1 374 aa14.58□□□□□ -0.07
NPHP3-201ENST00000337331 ALPK2Q86TB3 2170 aa14.58□□□□□ -0.08
NPHP3-201ENST00000337331 COL24A1Q17RW2 1714 aa14.58□□□□□ -0.08
NPHP3-201ENST00000337331 SEC14L6B5MCN3 397 aa14.58□□□□□ -0.08
NPHP3-201ENST00000337331 HOXB9P17482 250 aaPredicted RBP14.58□□□□□ -0.08
NPHP3-201ENST00000337331 POLR2HP52434 150 aaKnown RBP14.58□□□□□ -0.08
NPHP3-201ENST00000337331 NIPAL3Q6P499 406 aa14.58□□□□□ -0.08
NPHP3-201ENST00000337331 REC114Q7Z4M0 266 aa14.58□□□□□ -0.08
NPHP3-201ENST00000337331 MISPQ8IVT2 679 aa14.58□□□□□ -0.08
NPHP3-201ENST00000337331 RSC1A1Q92681 617 aa14.58□□□□□ -0.08
NPHP3-201ENST00000337331 RAB39BQ96DA2 213 aa14.58□□□□□ -0.08
NPHP3-201ENST00000337331 CHST6Q9GZX3 395 aa14.58□□□□□ -0.08
NPHP3-201ENST00000337331 CALCRP30988 508 aa14.58□□□□□ -0.08
NPHP3-201ENST00000337331 OR2A1Q8NGT9 310 aa14.58□□□□□ -0.08
NPHP3-201ENST00000337331 HSD17B8Q92506 261 aa14.58□□□□□ -0.08
NPHP3-201ENST00000337331 STACQ99469 402 aa14.58□□□□□ -0.08
NPHP3-201ENST00000337331 RAB33BQ9H082 229 aa14.58□□□□□ -0.08
NPHP3-201ENST00000337331 A4GNTQ9UNA3 340 aa14.58□□□□□ -0.08
NPHP3-201ENST00000337331 ARAP2Q8WZ64 1704 aa14.58□□□□□ -0.08
NPHP3-201ENST00000337331 ICE1Q9Y2F5 2266 aa14.58□□□□□ -0.08
NPHP3-201ENST00000337331 P2RY10O00398 339 aa14.57□□□□□ -0.08
NPHP3-201ENST00000337331 OR7C1O76099 320 aaPredicted RBP14.57□□□□□ -0.08
NPHP3-201ENST00000337331 CXCL12P48061 93 aa14.57□□□□□ -0.08
NPHP3-201ENST00000337331 ADPRHP54922 357 aa14.57□□□□□ -0.08
NPHP3-201ENST00000337331 ECH1Q13011 328 aa14.57□□□□□ -0.08
NPHP3-201ENST00000337331 INPP5JQ15735 1006 aaPredicted RBP14.57□□□□□ -0.08
NPHP3-201ENST00000337331 OR9K2Q8NGE7 335 aa14.57□□□□□ -0.08
NPHP3-201ENST00000337331 FRZBQ92765 325 aa14.57□□□□□ -0.08
NPHP3-201ENST00000337331 P2RY4P51582 365 aa14.57□□□□□ -0.08
NPHP3-201ENST00000337331 SPCS3P61009 180 aa14.57□□□□□ -0.08
NPHP3-201ENST00000337331 FAM185AQ8N0U4 392 aa14.57□□□□□ -0.08
NPHP3-201ENST00000337331 OR51B6Q9H340 312 aa14.57□□□□□ -0.08
NPHP3-201ENST00000337331 SIRT4Q9Y6E7 314 aaPredicted RBP14.57□□□□□ -0.08
NPHP3-201ENST00000337331 PIGBOS1A0A0B4J2F0 54 aa14.57□□□□□ -0.08
NPHP3-201ENST00000337331 ANKRD20A5PA0PJZ0 165 aa14.57□□□□□ -0.08
NPHP3-201ENST00000337331 STK17BO94768 372 aa14.57□□□□□ -0.08
NPHP3-201ENST00000337331 CTSLP07711 333 aa14.57□□□□□ -0.08
NPHP3-201ENST00000337331 VSIG10L2P0DP72 767 aa14.57□□□□□ -0.08
NPHP3-201ENST00000337331 PRPH2P23942 346 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms