RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 ARFGEF3Q5TH69 2177 aa12.89□□□□□ -0.35
RNF4-210ENST00000508235 A0A1W2PPW3 197 aa12.89□□□□□ -0.35
RNF4-210ENST00000508235 ZNF878C9JN71 531 aa12.89□□□□□ -0.35
RNF4-210ENST00000508235 M0R233 179 aa12.89□□□□□ -0.35
RNF4-210ENST00000508235 POLR2IP36954 125 aaKnown RBP12.89□□□□□ -0.35
RNF4-210ENST00000508235 SLC15A1P46059 708 aa12.89□□□□□ -0.35
RNF4-210ENST00000508235 GRB2P62993 217 aaKnown RBP12.89□□□□□ -0.35
RNF4-210ENST00000508235 EFNB1P98172 346 aa12.89□□□□□ -0.35
RNF4-210ENST00000508235 APOFQ13790 326 aa12.89□□□□□ -0.35
RNF4-210ENST00000508235 EIF2B1Q14232 305 aaKnown RBP12.89□□□□□ -0.35
RNF4-210ENST00000508235 TAF13Q15543 124 aa12.89□□□□□ -0.35
RNF4-210ENST00000508235 Q5PR19 223 aa12.89□□□□□ -0.35
RNF4-210ENST00000508235 MBNL2Q5VZF2 373 aaKnown RBP12.89□□□□□ -0.35
RNF4-210ENST00000508235 TIGD4Q8IY51 512 aa12.89□□□□□ -0.35
RNF4-210ENST00000508235 ZNF454Q8N9F8 522 aa12.89□□□□□ -0.35
RNF4-210ENST00000508235 BBS1Q8NFJ9 593 aa12.89□□□□□ -0.35
RNF4-210ENST00000508235 TRUB1Q8WWH5 349 aaKnown RBP12.89□□□□□ -0.35
RNF4-210ENST00000508235 APOBEC3DQ96AK3 386 aaPredicted RBP12.89□□□□□ -0.35
RNF4-210ENST00000508235 ZMYND19Q96E35 227 aaPredicted RBP12.89□□□□□ -0.35
RNF4-210ENST00000508235 RDH12Q96NR8 316 aa12.89□□□□□ -0.35
RNF4-210ENST00000508235 TEAD3Q99594 435 aa12.89□□□□□ -0.35
RNF4-210ENST00000508235 VRK1Q99986 396 aaPredicted RBP12.89□□□□□ -0.35
RNF4-210ENST00000508235 SYT3Q9BQG1 590 aa12.89□□□□□ -0.35
RNF4-210ENST00000508235 PNRC2Q9NPJ4 139 aaKnown RBP12.89□□□□□ -0.35
RNF4-210ENST00000508235 DDX28Q9NUL7 540 aaKnown RBP12.89□□□□□ -0.35
RNF4-210ENST00000508235 IGLV3-9A0A075B6K5 115 aa12.88□□□□□ -0.35
RNF4-210ENST00000508235 TMEM129A0AVI4 362 aa12.88□□□□□ -0.35
RNF4-210ENST00000508235 SLC22A31A6NKX4 558 aa12.88□□□□□ -0.35
RNF4-210ENST00000508235 F5H5K5 113 aa12.88□□□□□ -0.35
RNF4-210ENST00000508235 NGFP01138 241 aa12.88□□□□□ -0.35
RNF4-210ENST00000508235 RPS27P42677 84 aaKnown RBP12.88□□□□□ -0.35
RNF4-210ENST00000508235 EFNA4P52798 201 aa12.88□□□□□ -0.35
RNF4-210ENST00000508235 TPTEP56180 551 aa12.88□□□□□ -0.35
RNF4-210ENST00000508235 ERVS71-1P61550 626 aa12.88□□□□□ -0.35
RNF4-210ENST00000508235 TRIP10Q15642 601 aa12.88□□□□□ -0.35
RNF4-210ENST00000508235 KRTAP27-1Q3LI81 207 aa12.88□□□□□ -0.35
RNF4-210ENST00000508235 RFPL4BQ6ZWI9 263 aa12.88□□□□□ -0.35
RNF4-210ENST00000508235 MEPCEQ7L2J0 689 aaKnown RBP12.88□□□□□ -0.35
RNF4-210ENST00000508235 DPY19L4Q7Z388 723 aa12.88□□□□□ -0.35
RNF4-210ENST00000508235 SLC25A40Q8TBP6 338 aa12.88□□□□□ -0.35
RNF4-210ENST00000508235 ST7LQ8TDW4 575 aa12.88□□□□□ -0.35
RNF4-210ENST00000508235 SNX33Q8WV41 574 aa12.88□□□□□ -0.35
RNF4-210ENST00000508235 SLC7A6Q92536 515 aa12.88□□□□□ -0.35
RNF4-210ENST00000508235 SLAMF6Q96DU3 332 aa12.88□□□□□ -0.35
RNF4-210ENST00000508235 MARS2Q96GW9 593 aaKnown RBP12.88□□□□□ -0.35
RNF4-210ENST00000508235 IL4I1Q96RQ9 567 aa12.88□□□□□ -0.35
RNF4-210ENST00000508235 COPS4Q9BT78 406 aa12.88□□□□□ -0.35
RNF4-210ENST00000508235 TOR3AQ9H497 397 aa12.88□□□□□ -0.35
RNF4-210ENST00000508235 DCLRE1BQ9H816 532 aa12.88□□□□□ -0.35
RNF4-210ENST00000508235 CENPMQ9NSP4 180 aa12.88□□□□□ -0.35
RNF4-210ENST00000508235 PRRC2AP48634 2157 aaKnown RBP12.88□□□□□ -0.35
RNF4-210ENST00000508235 NAV2Q8IVL1 2488 aa12.88□□□□□ -0.35
RNF4-210ENST00000508235 POLQO75417 2590 aa12.88□□□□□ -0.35
RNF4-210ENST00000508235 RTTNQ86VV8 2226 aa12.88□□□□□ -0.35
RNF4-210ENST00000508235 ARID1AO14497 2285 aa12.87□□□□□ -0.35
RNF4-210ENST00000508235 SELENOFO60613 162 aa12.87□□□□□ -0.35
RNF4-210ENST00000508235 F12P00748 615 aaPredicted RBP12.87□□□□□ -0.35
RNF4-210ENST00000508235 IGHV3-13P01766 116 aa12.87□□□□□ -0.35
RNF4-210ENST00000508235 IGHV4-39P01824 125 aa12.87□□□□□ -0.35
RNF4-210ENST00000508235 APOC1P02654 83 aa12.87□□□□□ -0.35
RNF4-210ENST00000508235 DBHP09172 617 aa12.87□□□□□ -0.35
RNF4-210ENST00000508235 ACSM4P0C7M7 580 aa12.87□□□□□ -0.35
RNF4-210ENST00000508235 LIPAP38571 399 aa12.87□□□□□ -0.35
RNF4-210ENST00000508235 ELF3P78545 371 aaPredicted RBP12.87□□□□□ -0.35
RNF4-210ENST00000508235 TMED1Q13445 227 aa12.87□□□□□ -0.35
RNF4-210ENST00000508235 GGTLC2Q14390 218 aa12.87□□□□□ -0.35
RNF4-210ENST00000508235 NKPD1Q17RQ9 610 aa12.87□□□□□ -0.35
RNF4-210ENST00000508235 MSMPQ1L6U9 139 aa12.87□□□□□ -0.35
RNF4-210ENST00000508235 ZIK1Q3SY52 487 aaPredicted RBP12.87□□□□□ -0.35
RNF4-210ENST00000508235 AADACL4Q5VUY2 407 aa12.87□□□□□ -0.35
RNF4-210ENST00000508235 DRAM2Q6UX65 266 aa12.87□□□□□ -0.35
RNF4-210ENST00000508235 SLC16A9Q7RTY1 509 aa12.87□□□□□ -0.35
RNF4-210ENST00000508235 PACRGLQ8N7B6 248 aa12.87□□□□□ -0.35
RNF4-210ENST00000508235 OR10S1Q8NGN2 331 aa12.87□□□□□ -0.35
RNF4-210ENST00000508235 OTOSQ8NHW6 89 aa12.87□□□□□ -0.35
RNF4-210ENST00000508235 FAM81AQ8TBF8 368 aa12.87□□□□□ -0.35
RNF4-210ENST00000508235 KLF14Q8TD94 323 aaPredicted RBP12.87□□□□□ -0.35
RNF4-210ENST00000508235 NEU4Q8WWR8 484 aaPredicted RBP12.87□□□□□ -0.35
RNF4-210ENST00000508235 RFKQ969G6 155 aa12.87□□□□□ -0.35
RNF4-210ENST00000508235 KCNJ15Q99712 375 aa12.87□□□□□ -0.35
RNF4-210ENST00000508235 SLC29A1Q99808 456 aa12.87□□□□□ -0.35
RNF4-210ENST00000508235 ABHD6Q9BV23 337 aa12.87□□□□□ -0.35
RNF4-210ENST00000508235 C1QTNF5Q9BXJ0 243 aa12.87□□□□□ -0.35
RNF4-210ENST00000508235 OR2J1Q9GZK6 312 aa12.87□□□□□ -0.35
RNF4-210ENST00000508235 YIPF3Q9GZM5 350 aa12.87□□□□□ -0.35
RNF4-210ENST00000508235 MYOZ1Q9NP98 299 aaPredicted RBP12.87□□□□□ -0.35
RNF4-210ENST00000508235 CYSLTR2Q9NS75 346 aa12.87□□□□□ -0.35
RNF4-210ENST00000508235 CGGBP1Q9UFW8 167 aaPredicted RBP12.87□□□□□ -0.35
RNF4-210ENST00000508235 WARS2Q9UGM6 360 aaKnown RBP12.87□□□□□ -0.35
RNF4-210ENST00000508235 FZR1Q9UM11 496 aa12.87□□□□□ -0.35
RNF4-210ENST00000508235 TMEM14AQ9Y6G1 99 aa12.87□□□□□ -0.35
RNF4-210ENST00000508235 LRBAP50851 2863 aa12.87□□□□□ -0.35
RNF4-210ENST00000508235 PLSCR5A0PG75 271 aa12.86□□□□□ -0.35
RNF4-210ENST00000508235 CCDC182A6NF36 153 aa12.86□□□□□ -0.35
RNF4-210ENST00000508235 M0R129 80 aa12.86□□□□□ -0.35
RNF4-210ENST00000508235 M0R135 149 aa12.86□□□□□ -0.35
RNF4-210ENST00000508235 MPZL2O60487 215 aa12.86□□□□□ -0.35
RNF4-210ENST00000508235 LYNP07948 512 aa12.86□□□□□ -0.35
RNF4-210ENST00000508235 ADRA2AP08913 450 aa12.86□□□□□ -0.35
RNF4-210ENST00000508235 CSF3P09919 207 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms