RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 GPANK1O95872 356 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 CSN2P05814 226 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 RNH1P13489 461 aaKnown RBP15.9■□□□□ 0.14
NUP54-205ENST00000507257 NFYBP25208 207 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 GALNSP34059 522 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 NFATC4Q14934 902 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 CD226Q15762 336 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 SGCAQ16586 387 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 JAGN1Q8N5M9 183 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 ZNF615Q8N8J6 731 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 ZSCAN1Q8NBB4 408 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 OR52N5Q8NH56 324 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 CASTOR1Q8WTX7 329 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 ELSPBP1Q96BH3 223 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 DGAT2Q96PD7 388 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 OR10A5Q9H207 317 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 ZMAT3Q9HA38 289 aaKnown RBP15.9■□□□□ 0.14
NUP54-205ENST00000507257 PRODH2Q9UF12 536 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 LRP12Q9Y561 859 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 DCDC2BA2VCK2 349 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 MBTPS2O43462 519 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 OIP5O43482 229 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 SGCEO43556 437 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 FBXO24O75426 580 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 BPNT1O95861 308 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 HSD11B1P28845 292 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 GJA4P35212 333 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 HRH1P35367 487 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 ACTR1BP42025 376 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 SLC6A8P48029 635 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 ACTR1AP61163 376 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 HTRA3P83110 453 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 QRFPP83859 136 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 KIF26BQ2KJY2 2108 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 ACTBL2Q562R1 376 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 TMEM244Q5VVB8 128 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 SLC35D2Q76EJ3 337 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 FRMD1Q8N878 549 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 OR13C3Q8NGS6 347 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 OR10R2Q8NGX6 335 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 OR14C36Q8NHC7 312 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 NANPQ8TBE9 248 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 DEFB118Q96PH6 123 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 MICU1Q9BPX6 476 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 ABHD6Q9BV23 337 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 FN3KRPQ9HA64 309 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 GSN-AS1Q9NRJ2 163 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 METTL1Q9UBP6 276 aaKnown RBP15.9■□□□□ 0.14
NUP54-205ENST00000507257 FAM157AC9JC47 383 aa15.89■□□□□ 0.13
NUP54-205ENST00000507257 OR2T1O43869 369 aa15.89■□□□□ 0.13
NUP54-205ENST00000507257 OR6A2O95222 327 aa15.89■□□□□ 0.13
NUP54-205ENST00000507257 MT-ATP6P00846 226 aa15.89■□□□□ 0.13
NUP54-205ENST00000507257 IGHMP01871 453 aa15.89■□□□□ 0.13
NUP54-205ENST00000507257 IFNA6P05013 189 aa15.89■□□□□ 0.13
NUP54-205ENST00000507257 FCGR3AP08637 254 aa15.89■□□□□ 0.13
NUP54-205ENST00000507257 SFTA3P0C7M3 94 aa15.89■□□□□ 0.13
NUP54-205ENST00000507257 PVRP15151 417 aa15.89■□□□□ 0.13
NUP54-205ENST00000507257 RCC1P18754 421 aaPredicted RBP15.89■□□□□ 0.13
NUP54-205ENST00000507257 AGAP20933 346 aa15.89■□□□□ 0.13
NUP54-205ENST00000507257 RPL27P61353 136 aaKnown RBP15.89■□□□□ 0.13
NUP54-205ENST00000507257 SNRPEP62304 92 aaKnown RBP15.89■□□□□ 0.13
NUP54-205ENST00000507257 VAX1Q5SQQ9 334 aa15.89■□□□□ 0.13
NUP54-205ENST00000507257 ZNF585AQ6P3V2 769 aa15.89■□□□□ 0.13
NUP54-205ENST00000507257 ZNF561Q8N587 486 aa15.89■□□□□ 0.13
NUP54-205ENST00000507257 ACBD4Q8NC06 268 aa15.89■□□□□ 0.13
NUP54-205ENST00000507257 OR4D6Q8NGJ1 314 aa15.89■□□□□ 0.13
NUP54-205ENST00000507257 SPPL3Q8TCT6 385 aa15.89■□□□□ 0.13
NUP54-205ENST00000507257 PPP1R14AQ96A00 147 aa15.89■□□□□ 0.13
NUP54-205ENST00000507257 WDR92Q96MX6 357 aa15.89■□□□□ 0.13
NUP54-205ENST00000507257 SLC5A7Q9GZV3 580 aa15.89■□□□□ 0.13
NUP54-205ENST00000507257 OR51M1Q9H341 326 aa15.89■□□□□ 0.13
NUP54-205ENST00000507257 TMEM231Q9H6L2 316 aa15.89■□□□□ 0.13
NUP54-205ENST00000507257 PARP11Q9NR21 331 aa15.89■□□□□ 0.13
NUP54-205ENST00000507257 PCDHGA1Q9Y5H4 931 aa15.89■□□□□ 0.13
NUP54-205ENST00000507257 CLDN16Q9Y5I7 305 aa15.89■□□□□ 0.13
NUP54-205ENST00000507257 TIMM10BQ9Y5J6 103 aa15.89■□□□□ 0.13
NUP54-205ENST00000507257 TRAV36DV7A0A075B6V5 113 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 C13orf42A0A1B0GVH6 325 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 EIF1BO60739 113 aaKnown RBP15.88■□□□□ 0.13
NUP54-205ENST00000507257 APBB3O95704 486 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 IL33O95760 270 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 HLA-DQA2P01906 255 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 MT-ND4LP03901 98 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 GLAP06280 429 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 SPARCP09486 303 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 PET100P0DJ07 73 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 AKR1C4P17516 323 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 EIF1P41567 113 aaKnown RBP15.88■□□□□ 0.13
NUP54-205ENST00000507257 WASP42768 502 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 SULT1A2P50226 295 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 SMCO1Q147U7 214 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 SGCBQ16585 318 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 OR10K2Q6IF99 312 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 BTNL8Q6UX41 500 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 ARRDC1Q8N5I2 433 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 OR9A4Q8NGU2 314 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 PHOSPHO1Q8TCT1 267 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 METTL21AQ8WXB1 218 aa15.88■□□□□ 0.13
NUP54-205ENST00000507257 ZNF775Q96BV0 537 aaPredicted RBP15.88■□□□□ 0.13
NUP54-205ENST00000507257 LAT2Q9GZY6 243 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms