RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 LCN2P80188 198 aa11.32□□□□□ -0.6
CTDSP1-212ENST00000494067 CCDC92Q53HC0 331 aaPredicted RBP11.32□□□□□ -0.6
CTDSP1-212ENST00000494067 RBMS3Q6XE24 437 aaKnown RBP11.32□□□□□ -0.6
CTDSP1-212ENST00000494067 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.32□□□□□ -0.6
CTDSP1-212ENST00000494067 ERMAPQ96PL5 475 aaPredicted RBP11.32□□□□□ -0.6
CTDSP1-212ENST00000494067 RBM4Q9BWF3 364 aaKnown RBP11.32□□□□□ -0.6
CTDSP1-212ENST00000494067 CDADC1Q9BWV3 514 aa11.32□□□□□ -0.6
CTDSP1-212ENST00000494067 TMPRSS13Q9BYE2 586 aa11.32□□□□□ -0.6
CTDSP1-212ENST00000494067 NUAK2Q9H093 628 aa11.32□□□□□ -0.6
CTDSP1-212ENST00000494067 VSX1Q9NZR4 365 aaPredicted RBP11.32□□□□□ -0.6
CTDSP1-212ENST00000494067 CD300AQ9UGN4 299 aa11.32□□□□□ -0.6
CTDSP1-212ENST00000494067 MAGEL2Q9UJ55 1249 aa11.32□□□□□ -0.6
CTDSP1-212ENST00000494067 PPP1R3CQ9UQK1 317 aa11.32□□□□□ -0.6
CTDSP1-212ENST00000494067 STARD10Q9Y365 291 aa11.32□□□□□ -0.6
CTDSP1-212ENST00000494067 ARHGAP32A7KAX9 2087 aa11.32□□□□□ -0.6
CTDSP1-212ENST00000494067 PPIAL4EA0A075B759 164 aa11.31□□□□□ -0.6
CTDSP1-212ENST00000494067 PPIAL4CA0A0B4J2A2 164 aa11.31□□□□□ -0.6
CTDSP1-212ENST00000494067 PPIAL4DF5H284 164 aa11.31□□□□□ -0.6
CTDSP1-212ENST00000494067 RGS9O75916 674 aaPredicted RBP11.31□□□□□ -0.6
CTDSP1-212ENST00000494067 PPP1R3DO95685 299 aa11.31□□□□□ -0.6
CTDSP1-212ENST00000494067 PPIAL4FP0DN26 164 aa11.31□□□□□ -0.6
CTDSP1-212ENST00000494067 ANOS1P23352 680 aa11.31□□□□□ -0.6
CTDSP1-212ENST00000494067 HILS1P60008 231 aa11.31□□□□□ -0.6
CTDSP1-212ENST00000494067 SPIBQ01892 262 aa11.31□□□□□ -0.6
CTDSP1-212ENST00000494067 KCNMB1Q16558 191 aa11.31□□□□□ -0.6
CTDSP1-212ENST00000494067 SLC36A3Q495N2 470 aa11.31□□□□□ -0.6
CTDSP1-212ENST00000494067 TMEM155Q4W5P6 130 aa11.31□□□□□ -0.6
CTDSP1-212ENST00000494067 CPLX4Q7Z7G2 160 aa11.31□□□□□ -0.6
CTDSP1-212ENST00000494067 MUC20Q8N307 709 aaPredicted RBP11.31□□□□□ -0.6
CTDSP1-212ENST00000494067 SEMA6DQ8NFY4 1073 aa11.31□□□□□ -0.6
CTDSP1-212ENST00000494067 OR2AJ1Q8NGZ0 328 aa11.31□□□□□ -0.6
CTDSP1-212ENST00000494067 FANK1Q8TC84 345 aa11.31□□□□□ -0.6
CTDSP1-212ENST00000494067 GCDHQ92947 438 aaPredicted RBP11.31□□□□□ -0.6
CTDSP1-212ENST00000494067 APOBEC3DQ96AK3 386 aaPredicted RBP11.31□□□□□ -0.6
CTDSP1-212ENST00000494067 PYURFQ96I23 114 aa11.31□□□□□ -0.6
CTDSP1-212ENST00000494067 ZNF582Q96NG8 517 aaPredicted RBP11.31□□□□□ -0.6
CTDSP1-212ENST00000494067 HDHD2Q9H0R4 259 aa11.31□□□□□ -0.6
CTDSP1-212ENST00000494067 GORASP2Q9H8Y8 452 aa11.31□□□□□ -0.6
CTDSP1-212ENST00000494067 NTN4Q9HB63 628 aa11.31□□□□□ -0.6
CTDSP1-212ENST00000494067 TMCC3Q9ULS5 477 aa11.31□□□□□ -0.6
CTDSP1-212ENST00000494067 DYSFO75923 2080 aa11.31□□□□□ -0.6
CTDSP1-212ENST00000494067 IGLV1-36A0A0B4J1U3 117 aa11.3□□□□□ -0.6
CTDSP1-212ENST00000494067 ARPC2O15144 300 aa11.3□□□□□ -0.6
CTDSP1-212ENST00000494067 RER1O15258 196 aa11.3□□□□□ -0.6
CTDSP1-212ENST00000494067 ATP8B1O43520 1251 aa11.3□□□□□ -0.6
CTDSP1-212ENST00000494067 OR10H3O60404 316 aa11.3□□□□□ -0.6
CTDSP1-212ENST00000494067 TXNDC12O95881 172 aa11.3□□□□□ -0.6
CTDSP1-212ENST00000494067 IGHV2-70P01814 119 aa11.3□□□□□ -0.6
CTDSP1-212ENST00000494067 HLA-DQA2P01906 255 aa11.3□□□□□ -0.6
CTDSP1-212ENST00000494067 PSKH1P11801 424 aa11.3□□□□□ -0.6
CTDSP1-212ENST00000494067 HSD17B1P14061 328 aa11.3□□□□□ -0.6
CTDSP1-212ENST00000494067 SELEP16581 610 aa11.3□□□□□ -0.6
CTDSP1-212ENST00000494067 SRP9P49458 86 aaKnown RBP11.3□□□□□ -0.6
CTDSP1-212ENST00000494067 PRSS12P56730 875 aa11.3□□□□□ -0.6
CTDSP1-212ENST00000494067 BTG1P62324 171 aa11.3□□□□□ -0.6
CTDSP1-212ENST00000494067 RSPO1Q2MKA7 263 aaPredicted RBP11.3□□□□□ -0.6
CTDSP1-212ENST00000494067 RFX4Q33E94 735 aa11.3□□□□□ -0.6
CTDSP1-212ENST00000494067 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.3□□□□□ -0.6
CTDSP1-212ENST00000494067 ZNF283Q8N7M2 679 aa11.3□□□□□ -0.6
CTDSP1-212ENST00000494067 OR13G1Q8NGZ3 307 aa11.3□□□□□ -0.6
CTDSP1-212ENST00000494067 FAM216AQ8WUB2 273 aa11.3□□□□□ -0.6
CTDSP1-212ENST00000494067 ITLN1Q8WWA0 313 aa11.3□□□□□ -0.6
CTDSP1-212ENST00000494067 NSMCE2Q96MF7 247 aa11.3□□□□□ -0.6
CTDSP1-212ENST00000494067 COQ7Q99807 217 aa11.3□□□□□ -0.6
CTDSP1-212ENST00000494067 MRI1Q9BV20 369 aa11.3□□□□□ -0.6
CTDSP1-212ENST00000494067 IFT27Q9BW83 186 aa11.3□□□□□ -0.6
CTDSP1-212ENST00000494067 HCAR1Q9BXC0 346 aa11.3□□□□□ -0.6
CTDSP1-212ENST00000494067 FN3KQ9H479 309 aa11.3□□□□□ -0.6
CTDSP1-212ENST00000494067 PATZ1Q9HBE1 687 aaKnown RBP11.3□□□□□ -0.6
CTDSP1-212ENST00000494067 SRA1Q9HD15 236 aaKnown RBP11.3□□□□□ -0.6
CTDSP1-212ENST00000494067 NDE1Q9NXR1 346 aa11.3□□□□□ -0.6
CTDSP1-212ENST00000494067 PTTG3PQ9NZH4 202 aa11.3□□□□□ -0.6
CTDSP1-212ENST00000494067 LHFPL6Q9Y693 200 aa11.3□□□□□ -0.6
CTDSP1-212ENST00000494067 LRRC30A6NM36 301 aa11.29□□□□□ -0.6
CTDSP1-212ENST00000494067 FABP3P05413 133 aa11.29□□□□□ -0.6
CTDSP1-212ENST00000494067 ADRA2CP18825 462 aa11.29□□□□□ -0.6
CTDSP1-212ENST00000494067 CPT2P23786 658 aa11.29□□□□□ -0.6
CTDSP1-212ENST00000494067 MDH2P40926 338 aaKnown RBP11.29□□□□□ -0.6
CTDSP1-212ENST00000494067 HIST1H3AP68431 136 aa11.29□□□□□ -0.6
CTDSP1-212ENST00000494067 HLXQ14774 488 aaPredicted RBP11.29□□□□□ -0.6
CTDSP1-212ENST00000494067 ESCO2Q56NI9 601 aa11.29□□□□□ -0.6
CTDSP1-212ENST00000494067 ARMCX4Q5H9R4 360 aa11.29□□□□□ -0.6
CTDSP1-212ENST00000494067 SAMD4BQ5PRF9 694 aaKnown RBP11.29□□□□□ -0.6
CTDSP1-212ENST00000494067 HIST2H3PS2Q5TEC6 136 aa11.29□□□□□ -0.6
CTDSP1-212ENST00000494067 LEG1Q6P5S2 330 aa11.29□□□□□ -0.6
CTDSP1-212ENST00000494067 CORO6Q6QEF8 472 aa11.29□□□□□ -0.6
CTDSP1-212ENST00000494067 FBXW12Q6X9E4 464 aa11.29□□□□□ -0.6
CTDSP1-212ENST00000494067 HIST2H3AQ71DI3 136 aa11.29□□□□□ -0.6
CTDSP1-212ENST00000494067 LRRC28Q86X40 367 aaPredicted RBP11.29□□□□□ -0.6
CTDSP1-212ENST00000494067 OR5AS1Q8N127 324 aa11.29□□□□□ -0.6
CTDSP1-212ENST00000494067 C3orf56Q8N813 242 aa11.29□□□□□ -0.6
CTDSP1-212ENST00000494067 OR8G5Q8NG78 346 aa11.29□□□□□ -0.6
CTDSP1-212ENST00000494067 ZNRF4Q8WWF5 429 aa11.29□□□□□ -0.6
CTDSP1-212ENST00000494067 POP5Q969H6 163 aaKnown RBP11.29□□□□□ -0.6
CTDSP1-212ENST00000494067 OR2V2Q96R30 315 aa11.29□□□□□ -0.6
CTDSP1-212ENST00000494067 SIGLEC11Q96RL6 698 aa11.29□□□□□ -0.6
CTDSP1-212ENST00000494067 PITX2Q99697 317 aa11.29□□□□□ -0.6
CTDSP1-212ENST00000494067 OR52D1Q9H346 318 aa11.29□□□□□ -0.6
CTDSP1-212ENST00000494067 DDX28Q9NUL7 540 aaKnown RBP11.29□□□□□ -0.6
CTDSP1-212ENST00000494067 OR5V1Q9UGF6 321 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms