RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 NMNAT3Q96T66 252 aa14.99□□□□□ -0.01
NUP50-208ENST00000430547 EGLN1Q9GZT9 426 aa14.99□□□□□ -0.01
NUP50-208ENST00000430547 TUBG2Q9NRH3 451 aa14.99□□□□□ -0.01
NUP50-208ENST00000430547 TBCCD1Q9NVR7 557 aa14.99□□□□□ -0.01
NUP50-208ENST00000430547 IDH3BO43837 385 aa14.98□□□□□ -0.01
NUP50-208ENST00000430547 RP2O75695 350 aa14.98□□□□□ -0.01
NUP50-208ENST00000430547 IGHV1-46P01743 117 aa14.98□□□□□ -0.01
NUP50-208ENST00000430547 TFP02787 698 aa14.98□□□□□ -0.01
NUP50-208ENST00000430547 HIST1H1CP16403 213 aaKnown RBP14.98□□□□□ -0.01
NUP50-208ENST00000430547 PCMT1P22061 227 aa14.98□□□□□ -0.01
NUP50-208ENST00000430547 MMP15P51511 669 aa14.98□□□□□ -0.01
NUP50-208ENST00000430547 KCNMB1Q16558 191 aa14.98□□□□□ -0.01
NUP50-208ENST00000430547 PGBD2Q6P3X8 592 aa14.98□□□□□ -0.01
NUP50-208ENST00000430547 ZNF620Q6ZNG0 422 aa14.98□□□□□ -0.01
NUP50-208ENST00000430547 GJC3Q8NFK1 279 aa14.98□□□□□ -0.01
NUP50-208ENST00000430547 OR1F12Q8NHA8 337 aa14.98□□□□□ -0.01
NUP50-208ENST00000430547 POP5Q969H6 163 aaKnown RBP14.98□□□□□ -0.01
NUP50-208ENST00000430547 ELMOD3Q96FG2 381 aa14.98□□□□□ -0.01
NUP50-208ENST00000430547 TIMD4Q96H15 378 aa14.98□□□□□ -0.01
NUP50-208ENST00000430547 LRGUKQ96M69 825 aa14.98□□□□□ -0.01
NUP50-208ENST00000430547 DIRC2Q96SL1 478 aa14.98□□□□□ -0.01
NUP50-208ENST00000430547 MDFIQ99750 246 aa14.98□□□□□ -0.01
NUP50-208ENST00000430547 MAGIXQ9H6Y5 334 aa14.98□□□□□ -0.01
NUP50-208ENST00000430547 SRA1Q9HD15 236 aaKnown RBP14.98□□□□□ -0.01
NUP50-208ENST00000430547 RPRD1BQ9NQG5 326 aaKnown RBP14.98□□□□□ -0.01
NUP50-208ENST00000430547 ATPIF1Q9UII2 106 aa14.98□□□□□ -0.01
NUP50-208ENST00000430547 ZDHHC8Q9ULC8 765 aa14.98□□□□□ -0.01
NUP50-208ENST00000430547 PRPF19Q9UMS4 504 aaKnown RBP14.98□□□□□ -0.01
NUP50-208ENST00000430547 LYVE1Q9Y5Y7 322 aa14.98□□□□□ -0.01
NUP50-208ENST00000430547 ATRQ13535 2644 aa14.98□□□□□ -0.01
NUP50-208ENST00000430547 OR6C6A6NF89 314 aa14.97□□□□□ -0.01
NUP50-208ENST00000430547 B4DSR2 109 aa14.97□□□□□ -0.01
NUP50-208ENST00000430547 CLDN25C9JDP6 229 aa14.97□□□□□ -0.01
NUP50-208ENST00000430547 RER1O15258 196 aa14.97□□□□□ -0.01
NUP50-208ENST00000430547 CCNB2O95067 398 aa14.97□□□□□ -0.01
NUP50-208ENST00000430547 HLA-DQA2P01906 255 aa14.97□□□□□ -0.01
NUP50-208ENST00000430547 MVKQ03426 396 aa14.97□□□□□ -0.01
NUP50-208ENST00000430547 TRIM25Q14258 630 aaKnown RBP14.97□□□□□ -0.01
NUP50-208ENST00000430547 CR1LQ2VPA4 569 aa14.97□□□□□ -0.01
NUP50-208ENST00000430547 SLC36A3Q495N2 470 aa14.97□□□□□ -0.01
NUP50-208ENST00000430547 FAM98BQ52LJ0 330 aaKnown RBP14.97□□□□□ -0.01
NUP50-208ENST00000430547 CLEC12AQ5QGZ9 265 aa14.97□□□□□ -0.01
NUP50-208ENST00000430547 LCN8Q6JVE9 175 aa14.97□□□□□ -0.01
NUP50-208ENST00000430547 RINLQ6ZS11 566 aa14.97□□□□□ -0.01
NUP50-208ENST00000430547 GLCCI1Q86VQ1 547 aa14.97□□□□□ -0.01
NUP50-208ENST00000430547 SDR9C7Q8NEX9 313 aa14.97□□□□□ -0.01
NUP50-208ENST00000430547 OR9Q2Q8NGE9 314 aa14.97□□□□□ -0.01
NUP50-208ENST00000430547 SLC7A6Q92536 515 aa14.97□□□□□ -0.01
NUP50-208ENST00000430547 TRIM15Q9C019 465 aa14.97□□□□□ -0.01
NUP50-208ENST00000430547 RACGAP1Q9H0H5 632 aa14.97□□□□□ -0.01
NUP50-208ENST00000430547 HDHD2Q9H0R4 259 aa14.97□□□□□ -0.01
NUP50-208ENST00000430547 B9D1Q9UPM9 204 aa14.97□□□□□ -0.01
NUP50-208ENST00000430547 CDH10Q9Y6N8 788 aa14.97□□□□□ -0.01
NUP50-208ENST00000430547 IGLV1-36A0A0B4J1U3 117 aa14.96□□□□□ -0.01
NUP50-208ENST00000430547 ZSCAN5BA6NJL1 495 aa14.96□□□□□ -0.01
NUP50-208ENST00000430547 DCTN6O00399 190 aa14.96□□□□□ -0.01
NUP50-208ENST00000430547 GPANK1O95872 356 aa14.96□□□□□ -0.01
NUP50-208ENST00000430547 GAAP10253 952 aa14.96□□□□□ -0.01
NUP50-208ENST00000430547 TNFSF4P23510 183 aa14.96□□□□□ -0.01
NUP50-208ENST00000430547 MAGEA2P43356 314 aa14.96□□□□□ -0.01
NUP50-208ENST00000430547 RGS6P49758 472 aa14.96□□□□□ -0.01
NUP50-208ENST00000430547 HMGA2P52926 109 aa14.96□□□□□ -0.01
NUP50-208ENST00000430547 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.96□□□□□ -0.01
NUP50-208ENST00000430547 MEP1BQ16820 701 aa14.96□□□□□ -0.01
NUP50-208ENST00000430547 CCDC92Q53HC0 331 aaPredicted RBP14.96□□□□□ -0.01
NUP50-208ENST00000430547 SLC35F1Q5T1Q4 408 aa14.96□□□□□ -0.01
NUP50-208ENST00000430547 AVPI1Q5T686 147 aa14.96□□□□□ -0.01
NUP50-208ENST00000430547 CXXC5Q7LFL8 322 aaKnown RBP14.96□□□□□ -0.01
NUP50-208ENST00000430547 OR6V1Q8N148 313 aa14.96□□□□□ -0.01
NUP50-208ENST00000430547 OR52E2Q8NGJ4 325 aa14.96□□□□□ -0.01
NUP50-208ENST00000430547 OR5L1Q8NGL2 311 aa14.96□□□□□ -0.01
NUP50-208ENST00000430547 RAB1CQ92928 201 aa14.96□□□□□ -0.01
NUP50-208ENST00000430547 CCDC124Q96CT7 223 aaKnown RBP14.96□□□□□ -0.01
NUP50-208ENST00000430547 DCLRE1CQ96SD1 692 aaKnown RBP14.96□□□□□ -0.01
NUP50-208ENST00000430547 CDADC1Q9BWV3 514 aa14.96□□□□□ -0.01
NUP50-208ENST00000430547 EGLN3Q9H6Z9 239 aa14.96□□□□□ -0.01
NUP50-208ENST00000430547 REEP1Q9H902 201 aa14.96□□□□□ -0.01
NUP50-208ENST00000430547 MSL2Q9HCI7 577 aa14.96□□□□□ -0.01
NUP50-208ENST00000430547 TREM2Q9NZC2 230 aa14.96□□□□□ -0.01
NUP50-208ENST00000430547 TMEFF2Q9UIK5 374 aaPredicted RBP14.96□□□□□ -0.01
NUP50-208ENST00000430547 MXRA5Q9NR99 2828 aa14.95□□□□□ -0.02
NUP50-208ENST00000430547 TCRBV5S2A0A599 114 aa14.95□□□□□ -0.02
NUP50-208ENST00000430547 J3QW42 95 aa14.95□□□□□ -0.02
NUP50-208ENST00000430547 ADH4P08319 380 aa14.95□□□□□ -0.02
NUP50-208ENST00000430547 DVL1P1P54792 670 aaPredicted RBP14.95□□□□□ -0.02
NUP50-208ENST00000430547 TNFAIP6P98066 277 aaPredicted RBP14.95□□□□□ -0.02
NUP50-208ENST00000430547 SLC3A1Q07837 685 aa14.95□□□□□ -0.02
NUP50-208ENST00000430547 PSG7Q13046 419 aa14.95□□□□□ -0.02
NUP50-208ENST00000430547 TMEM255AQ5JRV8 349 aa14.95□□□□□ -0.02
NUP50-208ENST00000430547 PEG10Q86TG7 708 aaKnown RBP14.95□□□□□ -0.02
NUP50-208ENST00000430547 SLC26A10Q8NG04 563 aa14.95□□□□□ -0.02
NUP50-208ENST00000430547 OR2AJ1Q8NGZ0 328 aa14.95□□□□□ -0.02
NUP50-208ENST00000430547 CCL17Q92583 94 aa14.95□□□□□ -0.02
NUP50-208ENST00000430547 RAB39BQ96DA2 213 aa14.95□□□□□ -0.02
NUP50-208ENST00000430547 ASB9Q96DX5 294 aa14.95□□□□□ -0.02
NUP50-208ENST00000430547 C1orf159Q96HA4 380 aa14.95□□□□□ -0.02
NUP50-208ENST00000430547 BTBD10Q9BSF8 475 aa14.95□□□□□ -0.02
NUP50-208ENST00000430547 FN3KQ9H479 309 aa14.95□□□□□ -0.02
NUP50-208ENST00000430547 TBC1D23Q9NUY8 699 aa14.95□□□□□ -0.02
NUP50-208ENST00000430547 PURGQ9UJV8 347 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms