RNA–Protein interactions for RNA: ENST00000360019.7

CLN3-206, Transcript of CLN3, battenin, humanhuman

TSL 2 BASIC

Gene CLN3, Length 1,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-206ENST00000360019 C1orf185Q5T7R7 199 aa16.33■□□□□ 0.21
CLN3-206ENST00000360019 HIST2H3PS2Q5TEC6 136 aa16.33■□□□□ 0.21
CLN3-206ENST00000360019 FBXW9Q5XUX1 488 aa16.33■□□□□ 0.21
CLN3-206ENST00000360019 KLHL24Q6TFL4 600 aa16.33■□□□□ 0.21
CLN3-206ENST00000360019 TFAP2EQ6VUC0 442 aa16.33■□□□□ 0.21
CLN3-206ENST00000360019 TMEM91Q6ZNR0 172 aa16.33■□□□□ 0.21
CLN3-206ENST00000360019 HIST2H3AQ71DI3 136 aa16.33■□□□□ 0.21
CLN3-206ENST00000360019 PRSS35Q8N3Z0 413 aa16.33■□□□□ 0.21
CLN3-206ENST00000360019 OR2G2Q8NGZ5 317 aa16.33■□□□□ 0.21
CLN3-206ENST00000360019 TRDV1A0A1B0GX56 115 aa16.33■□□□□ 0.2
CLN3-206ENST00000360019 ZNF878C9JN71 531 aa16.33■□□□□ 0.2
CLN3-206ENST00000360019 GABRPO00591 440 aa16.33■□□□□ 0.2
CLN3-206ENST00000360019 ZFPL1O95159 310 aa16.33■□□□□ 0.2
CLN3-206ENST00000360019 CD1AP06126 327 aa16.33■□□□□ 0.2
CLN3-206ENST00000360019 CST2P09228 141 aa16.33■□□□□ 0.2
CLN3-206ENST00000360019 H2BFMP0C1H6 154 aa16.33■□□□□ 0.2
CLN3-206ENST00000360019 MFGE8Q08431 387 aaPredicted RBP16.33■□□□□ 0.2
CLN3-206ENST00000360019 NRN1LQ496H8 165 aa16.33■□□□□ 0.2
CLN3-206ENST00000360019 VWA1Q6PCB0 445 aa16.33■□□□□ 0.2
CLN3-206ENST00000360019 GFRALQ6UXV0 394 aa16.33■□□□□ 0.2
CLN3-206ENST00000360019 C3P1Q6ZMU1 363 aa16.33■□□□□ 0.2
CLN3-206ENST00000360019 ZNF813Q6ZN06 617 aa16.33■□□□□ 0.2
CLN3-206ENST00000360019 RHOUQ7L0Q8 258 aa16.33■□□□□ 0.2
CLN3-206ENST00000360019 CNEP1R1Q8N9A8 125 aa16.33■□□□□ 0.2
CLN3-206ENST00000360019 GJC3Q8NFK1 279 aa16.33■□□□□ 0.2
CLN3-206ENST00000360019 OR13C5Q8NGS8 318 aa16.33■□□□□ 0.2
CLN3-206ENST00000360019 CCDC92Q53HC0 331 aaPredicted RBP16.32■□□□□ 0.2
CLN3-206ENST00000360019 WDR38Q5JTN6 314 aa16.32■□□□□ 0.2
CLN3-206ENST00000360019 C22orf42Q6IC83 251 aa16.32■□□□□ 0.2
CLN3-206ENST00000360019 FDX2Q6P4F2 183 aa16.32■□□□□ 0.2
CLN3-206ENST00000360019 ZNF627Q7L945 461 aa16.32■□□□□ 0.2
CLN3-206ENST00000360019 SKA3Q8IX90 412 aa16.32■□□□□ 0.2
CLN3-206ENST00000360019 ALDH16A1Q8IZ83 802 aa16.32■□□□□ 0.2
CLN3-206ENST00000360019 FGFBP3Q8TAT2 258 aa16.32■□□□□ 0.2
CLN3-206ENST00000360019 C4orf45Q96LM5 186 aa16.32■□□□□ 0.2
CLN3-206ENST00000360019 ZGRF1Q86YA3 2104 aa16.32■□□□□ 0.2
CLN3-206ENST00000360019 OR4C45A6NMZ5 311 aa16.31■□□□□ 0.2
CLN3-206ENST00000360019 SC5DO75845 299 aa16.31■□□□□ 0.2
CLN3-206ENST00000360019 TNFSF13O75888 250 aa16.31■□□□□ 0.2
CLN3-206ENST00000360019 IL18BPO95998 194 aa16.31■□□□□ 0.2
CLN3-206ENST00000360019 CD8BP10966 210 aa16.31■□□□□ 0.2
CLN3-206ENST00000360019 FGF9P31371 208 aaPredicted RBP16.31■□□□□ 0.2
CLN3-206ENST00000360019 KIR3DL2P43630 455 aa16.31■□□□□ 0.2
CLN3-206ENST00000360019 RPS11P62280 158 aaKnown RBP eCLIP16.31■□□□□ 0.2
CLN3-206ENST00000360019 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.31■□□□□ 0.2
CLN3-206ENST00000360019 OR6K3Q8NGY3 331 aa16.31■□□□□ 0.2
CLN3-206ENST00000360019 ABHD4Q8TB40 342 aa16.31■□□□□ 0.2
CLN3-206ENST00000360019 RGP1Q92546 391 aaPredicted RBP16.31■□□□□ 0.2
CLN3-206ENST00000360019 DCSTAMPQ9H295 470 aa16.31■□□□□ 0.2
CLN3-206ENST00000360019 DDX28Q9NUL7 540 aaKnown RBP16.31■□□□□ 0.2
CLN3-206ENST00000360019 SLC5A6Q9Y289 635 aa16.31■□□□□ 0.2
CLN3-206ENST00000360019 R4GMQ9 66 aa16.31■□□□□ 0.2
CLN3-206ENST00000360019 KALRNO60229 2985 aa16.31■□□□□ 0.2
CLN3-206ENST00000360019 RGS9O75916 674 aaPredicted RBP16.31■□□□□ 0.2
CLN3-206ENST00000360019 ITGA5P08648 1049 aa16.31■□□□□ 0.2
CLN3-206ENST00000360019 PATE4P0C8F1 98 aa16.31■□□□□ 0.2
CLN3-206ENST00000360019 LY6DQ14210 128 aa16.31■□□□□ 0.2
CLN3-206ENST00000360019 PCSK4Q6UW60 755 aa16.31■□□□□ 0.2
CLN3-206ENST00000360019 USP43Q70EL4 1123 aa16.31■□□□□ 0.2
CLN3-206ENST00000360019 SLC16A14Q7RTX9 510 aa16.31■□□□□ 0.2
CLN3-206ENST00000360019 DOLPP1Q86YN1 238 aa16.31■□□□□ 0.2
CLN3-206ENST00000360019 MS4A15Q8N5U1 240 aa16.31■□□□□ 0.2
CLN3-206ENST00000360019 NAXEQ8NCW5 288 aa16.31■□□□□ 0.2
CLN3-206ENST00000360019 IL17RDQ8NFM7 739 aa16.31■□□□□ 0.2
CLN3-206ENST00000360019 PPP1R14AQ96A00 147 aa16.31■□□□□ 0.2
CLN3-206ENST00000360019 COQ7Q99807 217 aa16.31■□□□□ 0.2
CLN3-206ENST00000360019 ZNF224Q9NZL3 707 aa16.31■□□□□ 0.2
CLN3-206ENST00000360019 ZNF835Q9Y2P0 537 aa16.31■□□□□ 0.2
CLN3-206ENST00000360019 INTS1Q8N201 2190 aaKnown RBP16.3■□□□□ 0.2
CLN3-206ENST00000360019 PRRG2O14669 202 aa16.3■□□□□ 0.2
CLN3-206ENST00000360019 GPRIN2O60269 458 aa16.3■□□□□ 0.2
CLN3-206ENST00000360019 SLC19A2O60779 497 aa16.3■□□□□ 0.2
CLN3-206ENST00000360019 ZNF32P17041 273 aa16.3■□□□□ 0.2
CLN3-206ENST00000360019 GALP22466 123 aa16.3■□□□□ 0.2
CLN3-206ENST00000360019 MPGP29372 298 aa16.3■□□□□ 0.2
CLN3-206ENST00000360019 DCTDP32321 178 aa16.3■□□□□ 0.2
CLN3-206ENST00000360019 UGT2B10P36537 528 aa16.3■□□□□ 0.2
CLN3-206ENST00000360019 PER3P56645 1201 aa16.3■□□□□ 0.2
CLN3-206ENST00000360019 TRAM1Q15629 374 aa16.3■□□□□ 0.2
CLN3-206ENST00000360019 ABHD12BQ7Z5M8 362 aaPredicted RBP16.3■□□□□ 0.2
CLN3-206ENST00000360019 CATSPERDQ86XM0 798 aa16.3■□□□□ 0.2
CLN3-206ENST00000360019 OR5AK2Q8NH90 309 aa16.3■□□□□ 0.2
CLN3-206ENST00000360019 DYNC2LI1Q8TCX1 351 aa16.3■□□□□ 0.2
CLN3-206ENST00000360019 G6PC2Q9NQR9 355 aa16.3■□□□□ 0.2
CLN3-206ENST00000360019 FAM206AQ9NX38 181 aa16.3■□□□□ 0.2
CLN3-206ENST00000360019 SLC22A13Q9Y226 551 aa16.3■□□□□ 0.2
CLN3-206ENST00000360019 ZNF281Q9Y2X9 895 aa16.3■□□□□ 0.2
CLN3-206ENST00000360019 A0A096LPE4 126 aa16.29■□□□□ 0.2
CLN3-206ENST00000360019 TMEM269A0A1B0GVZ9 245 aa16.29■□□□□ 0.2
CLN3-206ENST00000360019 A0A1W2PPZ6 126 aa16.29■□□□□ 0.2
CLN3-206ENST00000360019 TTLL8A6PVC2 850 aa16.29■□□□□ 0.2
CLN3-206ENST00000360019 FARS2O95363 451 aaKnown RBP16.29■□□□□ 0.2
CLN3-206ENST00000360019 MMP7P09237 267 aaPredicted RBP16.29■□□□□ 0.2
CLN3-206ENST00000360019 SERPINB10P48595 397 aa16.29■□□□□ 0.2
CLN3-206ENST00000360019 MMP16P51512 607 aa16.29■□□□□ 0.2
CLN3-206ENST00000360019 CCR9P51686 369 aa16.29■□□□□ 0.2
CLN3-206ENST00000360019 ELFN2Q5R3F8 820 aa16.29■□□□□ 0.2
CLN3-206ENST00000360019 BTLAQ7Z6A9 289 aa16.29■□□□□ 0.2
CLN3-206ENST00000360019 KBTBD8Q8NFY9 601 aa16.29■□□□□ 0.2
CLN3-206ENST00000360019 ATF6BQ99941 703 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms